Wall clock time and date at job start Mon Mar 30 2020 01:21:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09001 * 109.47353 * 2 1 4 4 N 1.46908 * 109.46680 * 119.99552 * 2 1 3 5 5 C 1.46906 * 110.99741 * 274.74956 * 4 2 1 6 6 H 1.09001 * 109.47116 * 32.33489 * 5 4 2 7 7 C 1.53001 * 109.46847 * 152.32995 * 5 4 2 8 8 C 1.50700 * 109.47193 * 272.33180 * 5 4 2 9 9 H 1.07996 * 120.00144 * 0.02562 * 8 5 4 10 10 C 1.37876 * 119.99822 * 180.02562 * 8 5 4 11 11 N 1.31516 * 120.00038 * 359.97438 * 10 8 5 12 12 Si 1.86797 * 120.00063 * 180.02562 * 10 8 5 13 13 H 1.48498 * 109.47003 * 359.97438 * 12 10 8 14 14 H 1.48507 * 109.47177 * 119.99744 * 12 10 8 15 15 H 1.48499 * 109.47019 * 240.00031 * 12 10 8 16 16 C 1.50696 * 109.47662 * 239.99236 * 2 1 3 17 17 C 1.38267 * 119.96775 * 279.73166 * 16 2 1 18 18 C 1.38198 * 120.04547 * 180.27503 * 17 16 2 19 19 C 1.38439 * 119.98906 * 0.02562 * 18 17 16 20 20 F 1.35100 * 120.03106 * 180.02562 * 19 18 17 21 21 C 1.38549 * 119.94162 * 359.97438 * 19 18 17 22 22 Cl 1.73595 * 120.02887 * 180.02562 * 21 19 18 23 23 C 1.38215 * 119.97124 * 99.99815 * 16 2 1 24 24 H 1.09000 * 109.47557 * 305.37941 * 1 2 3 25 25 H 1.09009 * 109.46791 * 65.37821 * 1 2 3 26 26 H 1.09002 * 109.47503 * 185.37350 * 1 2 3 27 27 H 1.00903 * 110.99975 * 150.80166 * 4 2 1 28 28 H 1.09004 * 109.47167 * 180.75496 * 7 5 4 29 29 H 1.08996 * 109.47496 * 300.76151 * 7 5 4 30 30 H 1.09007 * 109.46758 * 60.76146 * 7 5 4 31 31 H 0.96998 * 119.99838 * 179.97438 * 11 10 8 32 32 H 1.08001 * 119.97593 * 0.27046 * 17 16 2 33 33 H 1.08000 * 119.99973 * 180.02562 * 18 17 16 34 34 H 1.08001 * 119.98776 * 359.73111 * 23 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 7 2.0196 -0.6925 1.1996 5 6 2.0879 0.2242 2.3455 6 1 1.2939 0.9666 2.2648 7 6 1.9154 -0.5678 3.6431 8 6 3.4256 0.9183 2.3545 9 1 4.1521 0.7005 1.5857 10 6 3.7218 1.8312 3.3444 11 7 2.8369 2.0967 4.2803 12 14 5.3796 2.6920 3.3552 13 1 6.1891 2.2217 2.2025 14 1 5.1761 4.1594 3.2519 15 1 6.0917 2.3788 4.6201 16 6 2.0324 -0.7105 -1.2303 17 6 2.0718 -2.0923 -1.2622 18 6 2.5376 -2.7454 -2.3875 19 6 2.9657 -2.0160 -3.4835 20 9 3.4207 -2.6536 -4.5842 21 6 2.9260 -0.6314 -3.4510 22 17 3.4615 0.2855 -4.8243 23 6 2.4586 0.0197 -2.3237 24 1 -0.3634 0.5950 0.8379 25 1 -0.3633 0.4282 -0.9343 26 1 -0.3634 -1.0231 0.0962 27 1 2.9154 -1.1239 1.0278 28 1 1.9528 0.1141 4.4927 29 1 0.9538 -1.0806 3.6308 30 1 2.7172 -1.3012 3.7304 31 1 3.0455 2.7387 4.9769 32 1 1.7384 -2.6615 -0.4071 33 1 2.5677 -3.8247 -2.4118 34 1 2.4273 1.0989 -2.2975 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068613103.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:21:14 Heat of formation + Delta-G solvation = -37.258115 kcal Electronic energy + Delta-G solvation = -18348.001061 eV Core-core repulsion = 15220.641462 eV Total energy + Delta-G solvation = -3127.359599 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.95629 -39.46321 -36.82547 -36.05033 -33.33432 -31.20543 -30.82103 -28.81523 -27.22525 -25.09738 -23.30498 -23.13664 -20.51836 -19.76885 -17.80214 -16.78799 -16.59754 -15.84084 -15.75396 -14.87840 -14.52714 -14.24622 -13.82841 -13.54382 -13.38682 -12.99626 -12.73469 -12.35291 -11.97844 -11.76398 -11.47727 -11.30034 -11.23665 -11.11731 -10.98762 -10.80408 -10.61176 -10.26586 -10.07435 -9.92292 -9.13481 -8.98467 -8.50705 -8.45792 -7.43517 -6.06252 -4.18346 0.99440 1.09335 1.97045 3.22751 3.31787 3.35143 3.46888 4.07486 4.35339 4.61445 4.79605 5.06470 5.18500 5.23881 5.29684 5.57677 5.75323 5.87408 5.93358 6.02076 6.11020 6.24696 6.39546 6.57953 6.67444 6.77320 6.84422 7.09792 7.25289 7.43749 7.69420 7.99852 8.07657 8.22681 8.54625 8.93372 9.50113 10.95365 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020528 B = 0.005035 C = 0.004473 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1363.675358 B = 5560.189028 C = 6258.826795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C 0.124 3.876 3 H 0.061 0.939 4 N -0.684 5.684 5 C 0.208 3.792 6 H 0.034 0.966 7 C -0.124 4.124 8 C -0.546 4.546 9 H 0.054 0.946 10 C 0.068 3.932 11 N -0.885 5.885 12 Si 0.887 3.113 13 H -0.274 1.274 14 H -0.284 1.284 15 H -0.283 1.283 16 C -0.068 4.068 17 C -0.068 4.068 18 C -0.145 4.145 19 C 0.095 3.905 20 F -0.134 7.134 21 C -0.073 4.073 22 Cl -0.060 7.060 23 C -0.079 4.079 24 H 0.061 0.939 25 H 0.046 0.954 26 H 0.058 0.942 27 H 0.331 0.669 28 H 0.081 0.919 29 H 0.013 0.987 30 H 0.024 0.976 31 H 0.261 0.739 32 H 0.149 0.851 33 H 0.142 0.858 34 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.486 -6.331 -12.962 14.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.013 3.987 3 H 0.079 0.921 4 N -0.314 5.314 5 C 0.100 3.900 6 H 0.052 0.948 7 C -0.182 4.182 8 C -0.585 4.585 9 H 0.072 0.928 10 C -0.134 4.134 11 N -0.523 5.523 12 Si 0.715 3.285 13 H -0.199 1.199 14 H -0.210 1.210 15 H -0.209 1.209 16 C -0.069 4.069 17 C -0.086 4.086 18 C -0.163 4.163 19 C 0.075 3.925 20 F -0.112 7.112 21 C -0.101 4.101 22 Cl -0.031 7.031 23 C -0.099 4.099 24 H 0.080 0.920 25 H 0.065 0.935 26 H 0.077 0.923 27 H 0.148 0.852 28 H 0.099 0.901 29 H 0.032 0.968 30 H 0.043 0.957 31 H 0.071 0.929 32 H 0.167 0.833 33 H 0.160 0.840 34 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.078 -6.395 -12.779 14.618 hybrid contribution 1.989 1.109 -0.501 2.332 sum -1.089 -5.286 -13.280 14.335 Atomic orbital electron populations 1.21775 0.94284 1.02083 1.00792 1.20387 0.95276 0.96375 0.86623 0.92134 1.61145 1.32578 1.33863 1.03837 1.19198 0.95724 0.89075 0.86001 0.94775 1.21676 0.96505 0.99022 1.01043 1.21861 1.01366 1.23879 1.11359 0.92793 1.24915 0.96730 0.96445 0.95356 1.69890 1.34197 1.34103 1.14145 0.86613 0.84371 0.79459 0.78015 1.19880 1.20989 1.20911 1.20319 0.97079 0.93883 0.95626 1.21150 0.96045 0.94122 0.97304 1.21153 1.01921 1.00821 0.92452 1.17406 1.01552 0.88565 0.84988 1.91506 1.86656 1.81790 1.51270 1.20920 1.06908 0.90307 0.91950 1.98369 1.88799 1.73621 1.42354 1.20952 0.97222 1.01033 0.90648 0.92026 0.93465 0.92339 0.85207 0.90076 0.96782 0.95675 0.92897 0.83293 0.84045 0.84059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.98 9.36 37.16 0.35 -1.63 16 2 C 0.12 2.07 2.62 -68.86 -0.18 1.89 16 3 H 0.06 1.15 7.59 -51.93 -0.39 0.76 16 4 N -0.68 -13.09 5.45 -102.16 -0.56 -13.65 16 5 C 0.21 4.88 2.39 -68.86 -0.16 4.72 16 6 H 0.03 0.88 7.18 -51.93 -0.37 0.51 16 7 C -0.12 -2.91 9.29 37.16 0.35 -2.56 16 8 C -0.55 -14.16 8.40 -34.44 -0.29 -14.45 16 9 H 0.05 1.41 7.70 -52.49 -0.40 1.00 16 10 C 0.07 1.82 5.30 -17.82 -0.09 1.73 16 11 N -0.89 -24.41 11.33 55.43 0.63 -23.79 16 12 Si 0.89 20.76 29.54 -169.99 -5.02 15.74 16 13 H -0.27 -6.39 7.11 56.52 0.40 -5.99 16 14 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 15 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 16 C -0.07 -0.98 4.72 -104.62 -0.49 -1.48 16 17 C -0.07 -0.88 8.99 -39.59 -0.36 -1.23 16 18 C -0.14 -1.73 10.03 -39.52 -0.40 -2.13 16 19 C 0.10 1.27 7.28 -39.39 -0.29 0.98 16 20 F -0.13 -1.81 16.84 2.25 0.04 -1.78 16 21 C -0.07 -1.01 6.33 -39.44 -0.25 -1.25 16 22 Cl -0.06 -0.78 28.62 -51.86 -1.48 -2.27 16 23 C -0.08 -1.11 9.45 -39.56 -0.37 -1.48 16 24 H 0.06 1.01 7.55 -51.93 -0.39 0.62 16 25 H 0.05 0.62 8.14 -51.92 -0.42 0.20 16 26 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 27 H 0.33 6.36 7.59 -39.29 -0.30 6.06 16 28 H 0.08 2.09 6.09 -51.93 -0.32 1.78 16 29 H 0.01 0.29 8.14 -51.93 -0.42 -0.14 16 30 H 0.02 0.56 8.14 -51.92 -0.42 0.14 16 31 H 0.26 6.88 8.31 -40.82 -0.34 6.54 16 32 H 0.15 1.83 7.71 -52.49 -0.40 1.43 16 33 H 0.14 1.34 8.06 -52.49 -0.42 0.92 16 34 H 0.14 1.85 8.04 -52.49 -0.42 1.43 16 LS Contribution 305.60 15.07 4.61 4.61 Total: -1.00 -26.56 305.60 -8.23 -34.80 By element: Atomic # 1 Polarization: 7.49 SS G_CDS: -4.25 Total: 3.24 kcal Atomic # 6 Polarization: -14.71 SS G_CDS: -2.19 Total: -16.90 kcal Atomic # 7 Polarization: -37.51 SS G_CDS: 0.07 Total: -37.43 kcal Atomic # 9 Polarization: -1.81 SS G_CDS: 0.04 Total: -1.78 kcal Atomic # 14 Polarization: 20.76 SS G_CDS: -5.02 Total: 15.74 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.48 Total: -2.27 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -26.56 -8.23 -34.80 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068613103.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.462 kcal (2) G-P(sol) polarization free energy of solvation -26.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.796 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.258 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds