Wall clock time and date at job start Mon Mar 30 2020 00:52:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34230 * 117.00236 * 2 1 4 4 O 1.20822 * 120.00279 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00164 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.47136 * 300.00393 * 5 3 2 7 7 N 1.46497 * 109.47548 * 179.97438 * 5 3 2 8 8 C 1.36938 * 120.00272 * 156.44026 * 7 5 3 9 9 H 1.07999 * 119.99341 * 0.02562 * 8 7 5 10 10 C 1.38813 * 120.00046 * 180.02562 * 8 7 5 11 11 N 1.31615 * 120.00002 * 359.97438 * 10 8 7 12 12 Si 1.86794 * 119.99914 * 180.02562 * 10 8 7 13 13 H 1.48509 * 109.46989 * 89.99814 * 12 10 8 14 14 H 1.48497 * 109.47207 * 209.99585 * 12 10 8 15 15 H 1.48499 * 109.47598 * 330.00160 * 12 10 8 16 16 C 1.50704 * 109.46806 * 60.00037 * 5 3 2 17 17 C 1.38202 * 120.00064 * 94.87136 * 16 5 3 18 18 C 1.38431 * 120.00316 * 179.76777 * 17 16 5 19 19 F 1.35100 * 120.00248 * 180.23033 * 18 17 16 20 20 C 1.38474 * 119.99397 * 0.53061 * 18 17 16 21 21 C 1.38162 * 120.00217 * 359.72047 * 20 18 17 22 22 C 1.38430 * 120.00004 * 275.14222 * 16 5 3 23 23 F 1.35096 * 120.00028 * 359.97438 * 22 16 5 24 24 H 1.08995 * 109.47374 * 180.02562 * 1 2 3 25 25 H 1.09005 * 109.47205 * 300.00456 * 1 2 3 26 26 H 1.09001 * 109.47300 * 60.00106 * 1 2 3 27 27 H 0.97000 * 119.99410 * 336.44775 * 7 5 3 28 28 H 0.96995 * 120.00191 * 179.97438 * 11 10 8 29 29 H 1.08003 * 120.00074 * 0.02562 * 17 16 5 30 30 H 1.08004 * 119.99702 * 179.70256 * 20 18 17 31 31 H 1.08004 * 119.99599 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9557 0.7808 0.8908 7 7 3.9818 2.6796 -0.0002 8 6 5.2182 3.0283 0.4741 9 1 5.8871 2.2674 0.8484 10 6 5.6116 4.3595 0.4739 11 7 4.7965 5.2865 0.0174 12 14 7.2985 4.8349 1.1202 13 1 8.2820 4.8021 0.0080 14 1 7.2420 6.2048 1.6907 15 1 7.7127 3.8759 2.1756 16 6 4.1055 0.5914 -1.2296 17 6 4.3938 1.3312 -2.3608 18 6 4.8937 0.7042 -3.4892 19 9 5.1798 1.4280 -4.5934 20 6 5.0945 -0.6659 -3.4881 21 6 4.8014 -1.4063 -2.3590 22 6 4.3069 -0.7782 -1.2284 23 9 4.0204 -1.5021 -0.1243 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 3.3810 3.3628 -0.3365 28 1 5.0713 6.2168 0.0175 29 1 4.2330 2.3992 -2.3631 30 1 5.4799 -1.1559 -4.3701 31 1 4.9577 -2.4749 -2.3584 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069708272.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:52:59 Heat of formation + Delta-G solvation = -129.881102 kcal Electronic energy + Delta-G solvation = -20969.468682 eV Core-core repulsion = 17273.923179 eV Total energy + Delta-G solvation = -3695.545503 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -48.59066 -48.58142 -40.18073 -38.50922 -36.28706 -34.86173 -32.26694 -30.09671 -29.64703 -28.06513 -26.17245 -23.59841 -22.41722 -22.10288 -20.12232 -18.07053 -17.52363 -17.00268 -16.88372 -16.57587 -16.11147 -15.84189 -15.42018 -14.97198 -14.65324 -14.13442 -13.91537 -13.66914 -13.51661 -13.29881 -12.87800 -12.67390 -12.32366 -11.99147 -11.78256 -11.51827 -11.12879 -10.95187 -10.78153 -10.50737 -10.23824 -10.18811 -9.89384 -9.23113 -8.74864 -8.21258 -7.30649 -5.94089 -3.29523 1.21192 1.34697 2.62149 3.01182 3.36798 3.42311 3.43507 3.70038 4.41758 4.46189 4.49336 4.83790 4.93945 5.17871 5.26737 5.29088 5.34203 5.48686 5.51992 5.60949 5.70156 5.90472 5.99626 6.15989 6.30273 6.45452 6.65194 6.67847 7.10372 7.54477 8.13151 8.22244 9.33876 9.76686 10.16157 11.26284 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.013705 B = 0.008212 C = 0.006307 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2042.569755 B = 3408.786034 C = 4438.094585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.358 6.358 3 C 0.458 3.542 4 O -0.491 6.491 5 C 0.225 3.775 6 H 0.103 0.897 7 N -0.696 5.696 8 C -0.260 4.260 9 H 0.077 0.923 10 C 0.002 3.998 11 N -0.918 5.918 12 Si 0.913 3.087 13 H -0.286 1.286 14 H -0.289 1.289 15 H -0.279 1.279 16 C -0.102 4.102 17 C -0.082 4.082 18 C 0.079 3.921 19 F -0.140 7.140 20 C -0.133 4.133 21 C -0.138 4.138 22 C 0.102 3.898 23 F -0.131 7.131 24 H 0.096 0.904 25 H 0.060 0.940 26 H 0.059 0.941 27 H 0.399 0.601 28 H 0.260 0.740 29 H 0.156 0.844 30 H 0.138 0.862 31 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.535 -13.862 -4.478 14.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.274 6.274 3 C 0.299 3.701 4 O -0.376 6.376 5 C 0.111 3.889 6 H 0.120 0.880 7 N -0.338 5.338 8 C -0.390 4.390 9 H 0.095 0.905 10 C -0.196 4.196 11 N -0.563 5.563 12 Si 0.743 3.257 13 H -0.213 1.213 14 H -0.215 1.215 15 H -0.204 1.204 16 C -0.107 4.107 17 C -0.101 4.101 18 C 0.059 3.941 19 F -0.118 7.118 20 C -0.152 4.152 21 C -0.157 4.157 22 C 0.082 3.918 23 F -0.110 7.110 24 H 0.115 0.885 25 H 0.079 0.921 26 H 0.078 0.922 27 H 0.236 0.764 28 H 0.070 0.930 29 H 0.174 0.826 30 H 0.156 0.844 31 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -3.624 -13.455 -4.374 14.605 hybrid contribution 0.556 0.610 0.202 0.850 sum -3.068 -12.845 -4.172 13.850 Atomic orbital electron populations 1.23183 0.77365 1.03075 1.02306 1.86573 1.22620 1.33819 1.84386 1.24352 0.92326 0.81267 0.72134 1.90651 1.66434 1.36287 1.44263 1.18488 0.84765 0.90218 0.95388 0.87960 1.42367 1.17876 0.99207 1.74389 1.19176 0.91184 0.92309 1.36298 0.90510 1.24825 0.98581 0.95538 1.00693 1.69695 1.35809 1.00662 1.50175 0.86119 0.83246 0.77768 0.78585 1.21294 1.21500 1.20399 1.20822 1.00988 0.91340 0.97581 1.21083 0.96655 1.02488 0.89865 1.17697 1.02740 0.89512 0.84135 1.91489 1.91426 1.77846 1.51070 1.20860 1.02858 0.92043 0.99407 1.20818 1.02290 1.00701 0.91884 1.17523 1.01404 0.88909 0.84001 1.91489 1.91181 1.77236 1.51064 0.88542 0.92135 0.92232 0.76363 0.92976 0.82635 0.84406 0.84236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.44 10.56 101.05 1.07 1.50 16 2 O -0.36 -5.89 10.37 -39.26 -0.41 -6.30 16 3 C 0.46 9.00 7.31 36.01 0.26 9.26 16 4 O -0.49 -10.95 15.57 -18.75 -0.29 -11.24 16 5 C 0.23 4.60 2.78 -70.23 -0.20 4.41 16 6 H 0.10 2.04 7.74 -51.93 -0.40 1.63 16 7 N -0.70 -17.17 3.75 -55.68 -0.21 -17.38 16 8 C -0.26 -6.89 9.91 -15.06 -0.15 -7.04 16 9 H 0.08 1.96 7.83 -52.49 -0.41 1.55 16 10 C 0.00 0.05 5.50 -17.43 -0.10 -0.05 16 11 N -0.92 -26.92 13.06 55.49 0.72 -26.20 16 12 Si 0.91 21.67 29.55 -169.99 -5.02 16.65 16 13 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 14 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 15 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 16 C -0.10 -1.88 4.93 -104.56 -0.52 -2.40 16 17 C -0.08 -1.54 9.30 -39.52 -0.37 -1.91 16 18 C 0.08 1.29 7.30 -39.42 -0.29 1.00 16 19 F -0.14 -2.35 17.27 2.25 0.04 -2.31 16 20 C -0.13 -1.77 10.02 -39.52 -0.40 -2.17 16 21 C -0.14 -1.81 10.02 -39.52 -0.40 -2.21 16 22 C 0.10 1.62 7.18 -39.43 -0.28 1.34 16 23 F -0.13 -2.07 16.51 2.25 0.04 -2.03 16 24 H 0.10 0.87 8.14 -51.93 -0.42 0.45 16 25 H 0.06 0.75 8.13 -51.93 -0.42 0.33 16 26 H 0.06 0.74 8.13 -51.93 -0.42 0.31 16 27 H 0.40 10.78 6.95 -40.82 -0.28 10.49 16 28 H 0.26 7.37 8.31 -40.82 -0.34 7.03 16 29 H 0.16 3.30 7.26 -52.48 -0.38 2.92 16 30 H 0.14 1.42 8.06 -52.48 -0.42 0.99 16 31 H 0.14 1.39 8.06 -52.48 -0.42 0.97 16 LS Contribution 290.84 15.07 4.38 4.38 Total: -1.00 -30.09 290.84 -4.83 -34.92 By element: Atomic # 1 Polarization: 10.48 SS G_CDS: -2.73 Total: 7.76 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -1.36 Total: 1.75 kcal Atomic # 7 Polarization: -44.09 SS G_CDS: 0.52 Total: -43.58 kcal Atomic # 8 Polarization: -16.84 SS G_CDS: -0.70 Total: -17.54 kcal Atomic # 9 Polarization: -4.42 SS G_CDS: 0.08 Total: -4.35 kcal Atomic # 14 Polarization: 21.67 SS G_CDS: -5.02 Total: 16.65 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -30.09 -4.83 -34.92 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069708272.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.957 kcal (2) G-P(sol) polarization free energy of solvation -30.093 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.924 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds