Wall clock time and date at job start Mon Mar 30 2020 01:32:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42899 * 113.99728 * 2 1 4 4 C 1.52997 * 109.47308 * 180.02562 * 3 2 1 5 5 N 1.46501 * 109.47229 * 64.99814 * 4 3 2 6 6 C 1.46498 * 119.99929 * 270.00212 * 5 4 3 7 7 C 1.50695 * 109.47654 * 269.99775 * 6 5 4 8 8 H 1.08008 * 119.99809 * 0.02562 * 7 6 5 9 9 C 1.37876 * 120.00557 * 180.02562 * 7 6 5 10 10 N 1.31518 * 120.00158 * 179.97438 * 9 7 6 11 11 Si 1.86800 * 119.99805 * 0.02562 * 9 7 6 12 12 H 1.48494 * 109.47180 * 89.99924 * 11 9 7 13 13 H 1.48501 * 109.46856 * 209.99926 * 11 9 7 14 14 H 1.48500 * 109.46852 * 329.99811 * 11 9 7 15 15 C 1.38991 * 119.99830 * 90.00416 * 5 4 3 16 16 C 1.39301 * 120.08474 * 185.02663 * 15 5 4 17 17 N 1.31946 * 119.92829 * 179.97438 * 16 15 5 18 18 C 1.32234 * 120.09739 * 359.97438 * 17 16 15 19 19 C 1.38334 * 120.17441 * 0.02562 * 18 17 16 20 20 Cl 1.73602 * 119.96562 * 180.02562 * 19 18 17 21 21 N 1.32341 * 120.07693 * 359.97438 * 19 18 17 22 22 H 1.09003 * 109.46817 * 180.02562 * 1 2 3 23 23 H 1.08998 * 109.47515 * 299.99568 * 1 2 3 24 24 H 1.09003 * 109.47292 * 60.00103 * 1 2 3 25 25 H 1.08999 * 109.47343 * 59.99913 * 3 2 1 26 26 H 1.08997 * 109.47232 * 300.00028 * 3 2 1 27 27 H 1.09003 * 109.46833 * 305.00088 * 4 3 2 28 28 H 1.08994 * 109.47529 * 185.00180 * 4 3 2 29 29 H 1.09006 * 109.47270 * 30.00167 * 6 5 4 30 30 H 1.09006 * 109.46934 * 149.99789 * 6 5 4 31 31 H 0.96994 * 120.00119 * 179.97438 * 10 9 7 32 32 H 1.08003 * 120.03770 * 359.97438 * 16 15 5 33 33 H 1.08003 * 119.91130 * 179.97438 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1848 -0.0006 5 7 3.9756 0.5645 -1.2527 6 6 4.1052 -0.8919 -1.3427 7 6 5.5010 -1.2977 -0.9449 8 1 6.2196 -0.5458 -0.6537 9 6 5.8607 -2.6287 -0.9527 10 7 7.0789 -2.9827 -0.6060 11 14 4.6180 -3.9290 -1.4570 12 1 4.7037 -4.1537 -2.9223 13 1 4.9122 -5.1978 -0.7436 14 1 3.2504 -3.4693 -1.1058 15 6 4.2704 1.3580 -2.3552 16 6 4.5877 0.7669 -3.5761 17 7 4.8665 1.5231 -4.6208 18 6 4.8447 2.8406 -4.5105 19 6 4.5301 3.4319 -3.3001 20 17 4.5023 5.1622 -3.1616 21 7 4.2493 2.6801 -2.2478 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3634 0.5137 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 1.6885 1.8464 0.8900 26 1 1.6885 1.8464 -0.8900 27 1 3.8514 0.5683 0.8410 28 1 3.9784 2.1766 0.0889 29 1 3.3852 -1.3628 -0.6733 30 1 3.9120 -1.2113 -2.3669 31 1 7.3319 -3.9190 -0.6111 32 1 4.6055 -0.3091 -3.6674 33 1 5.0738 3.4567 -5.3675 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000070846748.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:32:11 Heat of formation + Delta-G solvation = 10.210576 kcal Electronic energy + Delta-G solvation = -18784.491984 eV Core-core repulsion = 15679.110744 eV Total energy + Delta-G solvation = -3105.381241 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.64477 -38.01450 -36.71423 -36.16849 -33.68217 -32.60340 -30.88957 -29.54568 -27.36539 -26.05589 -24.29231 -23.64477 -22.34989 -20.64506 -17.44166 -17.31690 -17.08026 -16.29152 -15.97426 -15.73153 -15.05535 -14.86768 -14.65555 -14.24517 -13.88561 -12.75104 -12.59371 -12.52052 -12.30193 -11.91650 -11.68061 -11.64747 -11.30514 -11.27865 -11.05646 -10.95081 -10.76171 -10.55425 -10.24126 -9.68275 -9.55074 -9.17908 -8.83003 -8.69618 -7.08384 -6.21082 -4.23379 1.18989 1.62926 1.86229 3.20046 3.27305 3.30964 3.43784 3.95734 4.10034 4.28309 4.73062 4.82973 4.91127 5.12158 5.23037 5.33528 5.44111 5.49243 5.51400 5.55838 5.69605 5.75920 5.86873 6.24085 6.44517 6.56374 6.79158 7.18246 7.29344 7.42377 7.73912 7.93320 8.19396 8.38750 8.83597 9.37038 10.91526 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.015648 B = 0.006846 C = 0.005371 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1788.966717 B = 4089.150134 C = 5212.051490 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.380 6.380 3 C 0.048 3.952 4 C 0.127 3.873 5 N -0.556 5.556 6 C 0.222 3.778 7 C -0.545 4.545 8 H 0.077 0.923 9 C 0.078 3.922 10 N -0.890 5.890 11 Si 0.868 3.132 12 H -0.272 1.272 13 H -0.283 1.283 14 H -0.260 1.260 15 C 0.393 3.607 16 C 0.008 3.992 17 N -0.391 5.391 18 C -0.030 4.030 19 C 0.180 3.820 20 Cl -0.039 7.039 21 N -0.520 5.520 22 H 0.083 0.917 23 H 0.037 0.963 24 H 0.035 0.965 25 H 0.054 0.946 26 H 0.047 0.953 27 H 0.091 0.909 28 H 0.095 0.905 29 H 0.055 0.945 30 H 0.027 0.973 31 H 0.267 0.733 32 H 0.179 0.821 33 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.576 10.180 -2.339 14.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.298 6.298 3 C -0.030 4.030 4 C 0.003 3.997 5 N -0.262 5.262 6 C 0.102 3.898 7 C -0.583 4.583 8 H 0.095 0.905 9 C -0.126 4.126 10 N -0.527 5.527 11 Si 0.695 3.305 12 H -0.198 1.198 13 H -0.208 1.208 14 H -0.184 1.184 15 C 0.151 3.849 16 C -0.164 4.164 17 N -0.104 5.104 18 C -0.190 4.190 19 C 0.012 3.988 20 Cl -0.011 7.011 21 N -0.247 5.247 22 H 0.101 0.899 23 H 0.055 0.945 24 H 0.054 0.946 25 H 0.072 0.928 26 H 0.065 0.935 27 H 0.110 0.890 28 H 0.113 0.887 29 H 0.073 0.927 30 H 0.045 0.955 31 H 0.077 0.923 32 H 0.195 0.805 33 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -10.382 9.866 -2.122 14.478 hybrid contribution -0.678 -0.287 -0.042 0.737 sum -11.059 9.578 -2.164 14.789 Atomic orbital electron populations 1.22690 0.81973 1.02419 0.99359 1.88015 1.18861 1.27699 1.95255 1.23074 0.95214 0.84814 0.99905 1.21463 0.90915 1.00049 0.87295 1.46872 1.64856 1.06717 1.07786 1.19953 0.98531 0.73552 0.97797 1.21387 0.95841 0.93821 1.47241 0.90477 1.24837 0.95121 0.98252 0.94355 1.69887 1.18116 1.17579 1.47161 0.86954 0.82491 0.81728 0.79375 1.19753 1.20845 1.18407 1.19289 0.89927 0.86611 0.89036 1.23429 1.03200 1.02000 0.87789 1.68343 1.07506 1.04562 1.30003 1.22886 1.07708 0.91711 0.96706 1.22389 0.98041 0.87176 0.91217 1.98379 1.96595 1.07849 1.98324 1.67104 1.22109 1.04500 1.31013 0.89893 0.94489 0.94603 0.92829 0.93517 0.89041 0.88678 0.92742 0.95479 0.92313 0.80455 0.81868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.39 11.01 101.05 1.11 1.50 16 2 O -0.38 -6.15 9.53 -35.23 -0.34 -6.48 16 3 C 0.05 0.71 6.28 37.16 0.23 0.94 16 4 C 0.13 2.16 5.88 -4.04 -0.02 2.14 16 5 N -0.56 -11.03 2.54 -175.08 -0.44 -11.47 16 6 C 0.22 4.92 3.90 -5.20 -0.02 4.90 16 7 C -0.54 -14.42 9.94 -34.44 -0.34 -14.76 16 8 H 0.08 2.30 8.06 -52.48 -0.42 1.87 16 9 C 0.08 2.13 5.47 -17.82 -0.10 2.03 16 10 N -0.89 -26.10 13.96 55.43 0.77 -25.33 16 11 Si 0.87 19.97 27.47 -169.99 -4.67 15.30 16 12 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 13 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 14 H -0.26 -5.70 6.54 56.52 0.37 -5.33 16 15 C 0.39 7.65 7.37 -154.74 -1.14 6.51 16 16 C 0.01 0.15 10.43 -17.11 -0.18 -0.03 16 17 N -0.39 -7.11 10.49 -12.85 -0.13 -7.25 16 18 C -0.03 -0.48 10.99 -17.34 -0.19 -0.67 16 19 C 0.18 2.93 7.28 -17.30 -0.13 2.80 16 20 Cl -0.04 -0.52 29.13 -51.86 -1.51 -2.04 16 21 N -0.52 -9.47 9.24 -9.36 -0.09 -9.55 16 22 H 0.08 0.91 8.14 -51.93 -0.42 0.49 16 23 H 0.04 0.38 8.14 -51.93 -0.42 -0.05 16 24 H 0.04 0.40 8.14 -51.93 -0.42 -0.02 16 25 H 0.05 0.66 8.14 -51.93 -0.42 0.23 16 26 H 0.05 0.71 8.14 -51.93 -0.42 0.28 16 27 H 0.09 1.62 8.07 -51.93 -0.42 1.20 16 28 H 0.10 1.55 7.32 -51.93 -0.38 1.17 16 29 H 0.05 1.23 6.18 -51.93 -0.32 0.91 16 30 H 0.03 0.59 5.43 -51.93 -0.28 0.31 16 31 H 0.27 7.33 8.31 -40.82 -0.34 6.99 16 32 H 0.18 3.46 6.04 -52.48 -0.32 3.14 16 33 H 0.16 2.05 8.06 -52.48 -0.42 1.63 16 LS Contribution 299.82 15.07 4.52 4.52 Total: -1.00 -29.48 299.82 -6.51 -35.99 By element: Atomic # 1 Polarization: 4.79 SS G_CDS: -3.84 Total: 0.95 kcal Atomic # 6 Polarization: 6.14 SS G_CDS: -0.77 Total: 5.36 kcal Atomic # 7 Polarization: -53.71 SS G_CDS: 0.11 Total: -53.60 kcal Atomic # 8 Polarization: -6.15 SS G_CDS: -0.34 Total: -6.48 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -4.67 Total: 15.30 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.51 Total: -2.04 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -29.48 -6.51 -35.99 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000070846748.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.198 kcal (2) G-P(sol) polarization free energy of solvation -29.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.987 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds