Wall clock time and date at job start Mon Mar 30 2020 01:29:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.46902 * 111.00283 * 2 1 4 4 C 1.50708 * 109.46760 * 293.95026 * 3 2 1 5 5 H 1.07997 * 120.00113 * 0.02562 * 4 3 2 6 6 C 1.37880 * 119.99808 * 179.97438 * 4 3 2 7 7 N 1.31518 * 119.99452 * 180.02562 * 6 4 3 8 8 Si 1.86792 * 119.99987 * 359.97438 * 6 4 3 9 9 H 1.48502 * 109.47213 * 90.00143 * 8 6 4 10 10 H 1.48506 * 109.47273 * 209.99912 * 8 6 4 11 11 H 1.48500 * 109.47486 * 330.00319 * 8 6 4 12 12 C 1.46906 * 110.99888 * 123.94961 * 2 1 3 13 13 C 1.52997 * 109.46848 * 66.04509 * 12 2 1 14 14 C 1.50706 * 109.47203 * 179.97438 * 13 12 2 15 15 C 1.38459 * 120.01668 * 90.00072 * 14 13 12 16 16 F 1.35105 * 120.01813 * 359.97438 * 15 14 13 17 17 C 1.38443 * 119.96150 * 179.97438 * 15 14 13 18 18 C 1.38221 * 120.00333 * 0.02562 * 17 15 14 19 19 C 1.38204 * 120.03789 * 359.97438 * 18 17 15 20 20 C 1.38286 * 120.01897 * 269.72873 * 14 13 12 21 21 Cl 1.73603 * 120.00433 * 359.97438 * 20 14 13 22 22 H 1.08997 * 109.47334 * 296.05250 * 1 2 3 23 23 H 1.09000 * 109.46674 * 56.05127 * 1 2 3 24 24 H 1.08995 * 109.47296 * 176.04950 * 1 2 3 25 25 H 1.08993 * 109.47196 * 53.94614 * 3 2 1 26 26 H 1.09000 * 109.47010 * 173.95423 * 3 2 1 27 27 H 0.97003 * 119.99398 * 180.02562 * 7 6 4 28 28 H 1.08998 * 109.47121 * 186.04343 * 12 2 1 29 29 H 1.09000 * 109.47141 * 306.04541 * 12 2 1 30 30 H 1.08998 * 109.47584 * 300.00097 * 13 12 2 31 31 H 1.09005 * 109.46901 * 60.00396 * 13 12 2 32 32 H 1.08000 * 119.99890 * 179.97438 * 17 15 14 33 33 H 1.08001 * 119.98505 * 180.02562 * 18 17 15 34 34 H 1.07997 * 119.98357 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0471 -1.2986 5 1 1.0740 1.5114 -2.0486 6 6 2.0269 3.3494 -1.5286 7 7 1.7136 3.9391 -2.6617 8 14 2.9988 4.2765 -0.2306 9 1 4.4515 4.0642 -0.4542 10 1 2.6905 5.7263 -0.3229 11 1 2.6272 3.7763 1.1174 12 6 1.9954 -0.7659 1.1377 13 6 1.6314 -2.2425 0.9705 14 6 2.1719 -3.0284 2.1373 15 6 1.3977 -3.2052 3.2715 16 9 0.1575 -2.6729 3.3331 17 6 1.8953 -3.9279 4.3425 18 6 3.1643 -4.4719 4.2793 19 6 3.9371 -4.2955 3.1472 20 6 3.4392 -3.5782 2.0735 21 17 4.4078 -3.3637 0.6488 22 1 -0.3634 0.4513 0.9232 23 1 -0.3633 0.5739 -0.8525 24 1 -0.3633 -1.0252 -0.0708 25 1 1.5611 1.9274 0.8308 26 1 3.0798 1.3443 0.1082 27 1 1.9883 4.8552 -2.8237 28 1 3.0797 -0.6611 1.1757 29 1 1.5611 -0.3871 2.0629 30 1 0.5471 -2.3474 0.9324 31 1 2.0658 -2.6213 0.0453 32 1 1.2921 -4.0658 5.2276 33 1 3.5520 -5.0359 5.1148 34 1 4.9284 -4.7213 3.0986 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000083217186.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:29:55 Heat of formation + Delta-G solvation = -25.969234 kcal Electronic energy + Delta-G solvation = -18261.765653 eV Core-core repulsion = 15134.895576 eV Total energy + Delta-G solvation = -3126.870077 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -49.06466 -39.51783 -36.95330 -36.54778 -33.45670 -32.21335 -30.64909 -28.96924 -27.38725 -25.42825 -23.06699 -22.86930 -21.08717 -19.99995 -17.91135 -16.99466 -16.79627 -16.15067 -15.78316 -14.97123 -14.70210 -14.64661 -14.34486 -13.77228 -13.54486 -13.20538 -13.02761 -12.89755 -12.33037 -12.09295 -11.76413 -11.55563 -11.50730 -11.38429 -10.97420 -10.85752 -10.62046 -10.46127 -10.21804 -9.87756 -9.28755 -8.95083 -8.89341 -8.54439 -7.35952 -6.02909 -3.99836 0.74778 0.82958 1.93818 3.17406 3.30211 3.37343 3.39974 4.02179 4.36537 4.44299 4.54719 4.59300 4.89354 5.01647 5.26087 5.30454 5.32719 5.53655 5.63553 5.77706 5.80835 5.91153 5.91758 6.11885 6.24175 6.33966 6.37623 6.51070 6.72572 6.90108 7.02443 7.61366 7.91844 8.07077 8.68332 9.05823 9.59042 11.10248 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.023600 B = 0.004752 C = 0.004431 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1186.164253 B = 5890.686291 C = 6318.003371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.529 5.529 3 C 0.162 3.838 4 C -0.508 4.508 5 H 0.081 0.919 6 C 0.068 3.932 7 N -0.901 5.901 8 Si 0.873 3.127 9 H -0.275 1.275 10 H -0.286 1.286 11 H -0.268 1.268 12 C 0.064 3.936 13 C -0.085 4.085 14 C -0.099 4.099 15 C 0.112 3.888 16 F -0.129 7.129 17 C -0.150 4.150 18 C -0.089 4.089 19 C -0.121 4.121 20 C -0.009 4.009 21 Cl -0.045 7.045 22 H 0.011 0.989 23 H 0.080 0.920 24 H 0.049 0.951 25 H -0.012 1.012 26 H 0.024 0.976 27 H 0.263 0.737 28 H 0.070 0.930 29 H 0.022 0.978 30 H 0.080 0.920 31 H 0.094 0.906 32 H 0.139 0.861 33 H 0.140 0.860 34 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.020 -18.502 14.664 23.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 N -0.253 5.253 3 C 0.036 3.964 4 C -0.546 4.546 5 H 0.099 0.901 6 C -0.133 4.133 7 N -0.540 5.540 8 Si 0.701 3.299 9 H -0.201 1.201 10 H -0.212 1.212 11 H -0.193 1.193 12 C -0.065 4.065 13 C -0.122 4.122 14 C -0.101 4.101 15 C 0.093 3.907 16 F -0.108 7.108 17 C -0.169 4.169 18 C -0.107 4.107 19 C -0.140 4.140 20 C -0.036 4.036 21 Cl -0.015 7.015 22 H 0.030 0.970 23 H 0.099 0.901 24 H 0.068 0.932 25 H 0.006 0.994 26 H 0.042 0.958 27 H 0.073 0.927 28 H 0.088 0.912 29 H 0.040 0.960 30 H 0.098 0.902 31 H 0.113 0.887 32 H 0.157 0.843 33 H 0.158 0.842 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.232 -18.494 13.991 23.414 hybrid contribution 0.146 1.133 1.332 1.755 sum 3.378 -17.361 15.324 23.401 Atomic orbital electron populations 1.22298 0.88295 0.99993 1.00878 1.61919 1.07422 1.16418 1.39523 1.20188 0.94901 0.84048 0.97304 1.21038 1.35538 0.97179 1.00829 0.90057 1.24888 0.95813 0.97339 0.95264 1.69897 1.46966 1.13272 1.23864 0.86886 0.80943 0.79290 0.82804 1.20109 1.21184 1.19322 1.21966 1.00205 0.91600 0.92737 1.20712 1.01676 0.94833 0.95018 1.19916 0.93388 1.00191 0.96651 1.17378 0.81114 0.97497 0.94756 1.91531 1.38555 1.84197 1.96484 1.21228 0.97494 0.99728 0.98487 1.20904 0.93062 0.98929 0.97795 1.21122 1.01066 0.99496 0.92270 1.20650 0.92155 1.00407 0.90426 1.98414 1.69555 1.95943 1.37628 0.97015 0.90081 0.93225 0.99422 0.95838 0.92694 0.91168 0.95951 0.90199 0.88750 0.84272 0.84226 0.84329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.67 9.14 60.06 0.55 1.22 16 2 N -0.53 -11.46 4.75 -244.37 -1.16 -12.62 16 3 C 0.16 4.05 3.79 -4.97 -0.02 4.04 16 4 C -0.51 -14.68 9.01 -34.44 -0.31 -14.99 16 5 H 0.08 2.54 7.37 -52.49 -0.39 2.16 16 6 C 0.07 2.01 5.47 -17.82 -0.10 1.91 16 7 N -0.90 -27.89 13.96 55.43 0.77 -27.12 16 8 Si 0.87 21.87 27.47 -169.99 -4.67 17.20 16 9 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 10 H -0.29 -7.07 7.11 56.52 0.40 -6.66 16 11 H -0.27 -6.53 6.54 56.52 0.37 -6.16 16 12 C 0.06 1.15 4.94 -3.82 -0.02 1.13 16 13 C -0.08 -1.28 4.70 -27.88 -0.13 -1.41 16 14 C -0.10 -1.30 5.14 -104.52 -0.54 -1.84 16 15 C 0.11 1.37 7.24 -39.42 -0.29 1.09 16 16 F -0.13 -1.75 16.48 2.25 0.04 -1.71 16 17 C -0.15 -1.40 10.03 -39.51 -0.40 -1.79 16 18 C -0.09 -0.70 10.04 -39.60 -0.40 -1.09 16 19 C -0.12 -1.10 9.83 -39.54 -0.39 -1.49 16 20 C -0.01 -0.11 6.31 -39.51 -0.25 -0.36 16 21 Cl -0.04 -0.56 27.29 -51.86 -1.42 -1.98 16 22 H 0.01 0.22 8.14 -51.93 -0.42 -0.20 16 23 H 0.08 1.77 6.76 -51.93 -0.35 1.42 16 24 H 0.05 0.84 6.47 -51.93 -0.34 0.51 16 25 H -0.01 -0.30 7.18 -51.93 -0.37 -0.68 16 26 H 0.02 0.59 7.36 -51.93 -0.38 0.21 16 27 H 0.26 7.63 8.31 -40.82 -0.34 7.29 16 28 H 0.07 1.27 7.93 -51.93 -0.41 0.86 16 29 H 0.02 0.41 8.12 -51.93 -0.42 -0.02 16 30 H 0.08 1.19 6.05 -51.93 -0.31 0.88 16 31 H 0.09 1.45 6.89 -51.93 -0.36 1.09 16 32 H 0.14 0.98 8.06 -52.49 -0.42 0.55 16 33 H 0.14 0.66 8.06 -52.49 -0.42 0.24 16 34 H 0.14 0.97 8.06 -52.49 -0.42 0.54 16 LS Contribution 301.10 15.07 4.54 4.54 Total: -1.00 -31.25 301.10 -8.37 -39.62 By element: Atomic # 1 Polarization: -0.14 SS G_CDS: -4.19 Total: -4.33 kcal Atomic # 6 Polarization: -11.32 SS G_CDS: -2.28 Total: -13.60 kcal Atomic # 7 Polarization: -39.35 SS G_CDS: -0.39 Total: -39.74 kcal Atomic # 9 Polarization: -1.75 SS G_CDS: 0.04 Total: -1.71 kcal Atomic # 14 Polarization: 21.87 SS G_CDS: -4.67 Total: 17.20 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.42 Total: -1.98 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -31.25 -8.37 -39.62 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000083217186.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.655 kcal (2) G-P(sol) polarization free energy of solvation -31.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.624 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds