Wall clock time and date at job start Mon Mar 30 2020 01:11:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52993 * 109.47332 * 2 1 4 4 N 1.46494 * 109.47384 * 183.75884 * 3 2 1 5 5 C 1.36943 * 119.99456 * 96.26196 * 4 3 2 6 6 H 1.07997 * 119.99686 * 176.77205 * 5 4 3 7 7 C 1.38807 * 120.00142 * 356.78303 * 5 4 3 8 8 N 1.31627 * 119.99906 * 325.45468 * 7 5 4 9 9 Si 1.86804 * 120.00419 * 145.45511 * 7 5 4 10 10 H 1.48504 * 109.46751 * 94.98320 * 9 7 5 11 11 H 1.48499 * 109.47231 * 214.98449 * 9 7 5 12 12 H 1.48500 * 109.46898 * 334.98489 * 9 7 5 13 13 C 1.46493 * 120.00677 * 276.26632 * 4 3 2 14 14 C 1.50700 * 109.47468 * 265.15466 * 13 4 3 15 15 C 1.38209 * 120.00678 * 258.41579 * 14 13 4 16 16 C 1.38325 * 120.01288 * 179.76751 * 15 14 13 17 17 Cl 1.73598 * 119.99034 * 180.25226 * 16 15 14 18 18 C 1.38372 * 120.02591 * 0.50257 * 16 15 14 19 19 C 1.38175 * 120.01101 * 359.75164 * 18 16 15 20 20 C 1.38439 * 120.00547 * 78.68708 * 14 13 4 21 21 F 1.35093 * 120.01001 * 0.02562 * 20 14 13 22 22 H 1.08999 * 109.47352 * 59.99797 * 1 2 3 23 23 H 1.09006 * 109.47232 * 179.97438 * 1 2 3 24 24 H 1.08994 * 109.47256 * 299.99322 * 1 2 3 25 25 H 1.09006 * 109.46783 * 240.00164 * 2 1 3 26 26 H 1.08999 * 109.47104 * 120.01132 * 2 1 3 27 27 H 1.09008 * 109.46502 * 63.76572 * 3 2 1 28 28 H 1.08994 * 109.47239 * 303.76952 * 3 2 1 29 29 H 0.97000 * 120.00105 * 180.02562 * 8 7 5 30 30 H 1.08999 * 109.46940 * 25.15687 * 13 4 3 31 31 H 1.09004 * 109.47253 * 145.14844 * 13 4 3 32 32 H 1.08009 * 119.99093 * 0.02562 * 15 14 13 33 33 H 1.08005 * 120.00004 * 179.72162 * 18 16 15 34 34 H 1.07995 * 120.00661 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 7 3.5022 1.4434 -0.0905 5 6 4.1127 1.5990 -1.3064 6 1 5.1897 1.6520 -1.3670 7 6 3.3473 1.6887 -2.4610 8 7 2.2299 1.0009 -2.5649 9 14 3.9031 2.7855 -3.8673 10 1 4.6602 1.9767 -4.8562 11 1 2.7154 3.3870 -4.5251 12 1 4.7756 3.8645 -3.3384 13 6 4.3112 1.2779 1.1194 14 6 4.6993 2.6326 1.6536 15 6 5.9693 3.1277 1.4254 16 6 6.3240 4.3732 1.9114 17 17 7.9173 4.9973 1.6189 18 6 5.4111 5.1197 2.6353 19 6 4.1428 4.6235 2.8685 20 6 3.7854 3.3790 2.3777 21 9 2.5458 2.8929 2.6061 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 1.8933 -0.5138 -0.8901 26 1 1.8933 -0.5140 0.8899 27 1 1.7328 1.9363 0.9219 28 1 1.6227 1.9754 -0.8542 29 1 1.6952 1.0633 -3.3718 30 1 3.7332 0.7424 1.8725 31 1 5.2106 0.7103 0.8804 32 1 6.6836 2.5437 0.8638 33 1 5.6900 6.0903 3.0185 34 1 3.4304 5.2060 3.4338 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000092398383.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:46 Heat of formation + Delta-G solvation = -9.180462 kcal Electronic energy + Delta-G solvation = -18969.593206 eV Core-core repulsion = 15843.451145 eV Total energy + Delta-G solvation = -3126.142061 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.52036 -38.90860 -36.48226 -35.96279 -32.58263 -31.86692 -30.33216 -29.68764 -25.90367 -25.50020 -22.64205 -22.32316 -21.01015 -19.73472 -17.38335 -16.74682 -16.20524 -15.88914 -15.52160 -14.76062 -14.08886 -13.77061 -13.58611 -13.26531 -13.24561 -13.05085 -12.87876 -12.43206 -12.15193 -11.56685 -11.24119 -11.13345 -11.09896 -10.75875 -10.71680 -10.66143 -10.39226 -10.09012 -10.03272 -9.77549 -9.20129 -8.73914 -8.28816 -8.19066 -6.99666 -5.88778 -3.04145 1.26963 1.42115 2.26921 3.38539 3.49247 3.54456 3.71724 4.52561 4.56802 4.89051 5.02426 5.24129 5.40443 5.49476 5.57877 5.78919 6.03741 6.15354 6.18485 6.22253 6.28554 6.36374 6.49314 6.53994 6.72232 6.74906 6.91537 7.04226 7.16391 7.23009 7.65329 7.75884 8.01482 8.27104 9.16907 9.82500 10.27593 11.17790 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.016253 B = 0.007379 C = 0.005566 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1722.309496 B = 3793.591089 C = 5029.341587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.125 4.125 3 C 0.160 3.840 4 N -0.585 5.585 5 C -0.265 4.265 6 H 0.075 0.925 7 C 0.013 3.987 8 N -0.874 5.874 9 Si 0.872 3.128 10 H -0.290 1.290 11 H -0.290 1.290 12 H -0.280 1.280 13 C 0.184 3.816 14 C -0.098 4.098 15 C -0.072 4.072 16 C -0.047 4.047 17 Cl -0.080 7.080 18 C -0.100 4.100 19 C -0.149 4.149 20 C 0.111 3.889 21 F -0.131 7.131 22 H 0.052 0.948 23 H 0.033 0.967 24 H 0.032 0.968 25 H 0.091 0.909 26 H 0.019 0.981 27 H 0.020 0.980 28 H 0.083 0.917 29 H 0.253 0.747 30 H 0.057 0.943 31 H 0.060 0.940 32 H 0.138 0.862 33 H 0.134 0.866 34 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.102 4.904 10.499 12.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.165 4.165 3 C 0.035 3.965 4 N -0.304 5.304 5 C -0.392 4.392 6 H 0.093 0.907 7 C -0.186 4.186 8 N -0.517 5.517 9 Si 0.700 3.300 10 H -0.217 1.217 11 H -0.216 1.216 12 H -0.206 1.206 13 C 0.055 3.945 14 C -0.103 4.103 15 C -0.092 4.092 16 C -0.073 4.073 17 Cl -0.051 7.051 18 C -0.120 4.120 19 C -0.168 4.168 20 C 0.091 3.909 21 F -0.110 7.110 22 H 0.071 0.929 23 H 0.052 0.948 24 H 0.051 0.949 25 H 0.109 0.891 26 H 0.038 0.962 27 H 0.038 0.962 28 H 0.101 0.899 29 H 0.063 0.937 30 H 0.075 0.925 31 H 0.078 0.922 32 H 0.156 0.844 33 H 0.152 0.848 34 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.043 4.885 10.305 12.099 hybrid contribution 0.137 0.710 -0.904 1.157 sum 4.179 5.595 9.401 11.711 Atomic orbital electron populations 1.21607 0.98252 0.99346 1.00233 1.21965 0.93199 1.00503 1.00806 1.21042 0.81966 0.94666 0.98853 1.44156 1.01432 1.83478 1.01333 1.19101 0.91699 1.44872 0.83558 0.90714 1.24588 0.97187 0.99946 0.96903 1.70306 1.17058 1.37011 1.27294 0.86742 0.77862 0.82684 0.82693 1.21733 1.21571 1.20565 1.19678 0.96151 0.88857 0.89781 1.21348 0.91979 1.01851 0.95089 1.20829 0.96221 0.93762 0.98340 1.20909 0.87130 0.95915 1.03379 1.98345 1.24362 1.87188 1.95197 1.20670 0.92173 0.99907 0.99215 1.20973 0.97276 0.95198 1.03365 1.17610 0.80683 0.93311 0.99267 1.91466 1.39120 1.87797 1.92577 0.92887 0.94761 0.94893 0.89090 0.96213 0.96197 0.89860 0.93703 0.92502 0.92193 0.84423 0.84834 0.84605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.62 9.91 37.16 0.37 -2.26 16 2 C -0.13 -2.78 5.78 -26.73 -0.15 -2.93 16 3 C 0.16 3.76 4.87 -4.05 -0.02 3.74 16 4 N -0.59 -13.93 2.53 -174.62 -0.44 -14.37 16 5 C -0.26 -6.93 9.63 -15.06 -0.14 -7.07 16 6 H 0.07 1.93 8.02 -52.49 -0.42 1.51 16 7 C 0.01 0.34 4.71 -17.43 -0.08 0.26 16 8 N -0.87 -23.81 9.30 55.49 0.52 -23.30 16 9 Si 0.87 21.21 29.67 -169.99 -5.04 16.16 16 10 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 11 H -0.29 -7.14 7.11 56.52 0.40 -6.74 16 12 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 13 C 0.18 3.63 5.54 -5.20 -0.03 3.61 16 14 C -0.10 -1.76 5.44 -104.56 -0.57 -2.33 16 15 C -0.07 -1.18 9.45 -39.56 -0.37 -1.56 16 16 C -0.05 -0.69 6.32 -39.50 -0.25 -0.94 16 17 Cl -0.08 -1.07 28.95 -51.86 -1.50 -2.57 16 18 C -0.10 -1.36 9.83 -39.56 -0.39 -1.74 16 19 C -0.15 -2.13 10.03 -39.52 -0.40 -2.52 16 20 C 0.11 1.91 7.25 -39.42 -0.29 1.63 16 21 F -0.13 -2.38 14.39 2.25 0.03 -2.35 16 22 H 0.05 1.06 8.14 -51.93 -0.42 0.64 16 23 H 0.03 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.03 0.58 8.14 -51.93 -0.42 0.15 16 25 H 0.09 2.32 6.71 -51.93 -0.35 1.97 16 26 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 27 H 0.02 0.45 5.70 -51.92 -0.30 0.15 16 28 H 0.08 2.21 5.80 -51.93 -0.30 1.91 16 29 H 0.25 6.76 8.31 -40.82 -0.34 6.42 16 30 H 0.06 1.08 7.88 -51.93 -0.41 0.67 16 31 H 0.06 1.14 7.92 -51.93 -0.41 0.72 16 32 H 0.14 2.16 8.03 -52.48 -0.42 1.74 16 33 H 0.13 1.44 8.06 -52.48 -0.42 1.02 16 34 H 0.14 1.58 8.06 -52.49 -0.42 1.16 16 LS Contribution 301.93 15.07 4.55 4.55 Total: -1.00 -27.19 301.93 -8.49 -35.68 By element: Atomic # 1 Polarization: 2.60 SS G_CDS: -4.28 Total: -1.68 kcal Atomic # 6 Polarization: -9.80 SS G_CDS: -2.32 Total: -12.12 kcal Atomic # 7 Polarization: -37.75 SS G_CDS: 0.07 Total: -37.67 kcal Atomic # 9 Polarization: -2.38 SS G_CDS: 0.03 Total: -2.35 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.04 Total: 16.16 kcal Atomic # 17 Polarization: -1.07 SS G_CDS: -1.50 Total: -2.57 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -27.19 -8.49 -35.68 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000092398383.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.504 kcal (2) G-P(sol) polarization free energy of solvation -27.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.690 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds