Wall clock time and date at job start Mon Mar 30 2020 01:11:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52998 * 109.47321 * 2 1 4 4 N 1.46504 * 109.47365 * 179.97438 * 3 2 1 5 5 C 1.36938 * 120.00047 * 89.99404 * 4 3 2 6 6 H 1.08003 * 119.99593 * 346.25031 * 5 4 3 7 7 C 1.38811 * 119.99821 * 165.97710 * 5 4 3 8 8 N 1.31620 * 120.00033 * 37.08810 * 7 5 4 9 9 Si 1.86798 * 120.00004 * 217.08190 * 7 5 4 10 10 H 1.48501 * 109.47038 * 0.02562 * 9 7 5 11 11 H 1.48507 * 109.46993 * 120.00102 * 9 7 5 12 12 H 1.48499 * 109.47417 * 240.00119 * 9 7 5 13 13 C 1.46500 * 119.99606 * 269.99764 * 4 3 2 14 14 C 1.50703 * 109.46965 * 263.26841 * 13 4 3 15 15 C 1.38230 * 120.00646 * 244.29152 * 14 13 4 16 16 C 1.38228 * 120.05159 * 179.76982 * 15 14 13 17 17 C 1.38257 * 120.05287 * 0.50716 * 16 15 14 18 18 C 1.38274 * 120.01611 * 359.75091 * 17 16 15 19 19 Cl 1.73608 * 120.02622 * 179.97438 * 18 17 16 20 20 C 1.38404 * 120.00258 * 64.57002 * 14 13 4 21 21 F 1.35098 * 120.03274 * 359.97438 * 20 14 13 22 22 H 1.08997 * 109.47079 * 300.00924 * 1 2 3 23 23 H 1.09004 * 109.46688 * 60.00190 * 1 2 3 24 24 H 1.08998 * 109.46987 * 180.02562 * 1 2 3 25 25 H 1.08990 * 109.47250 * 239.99438 * 2 1 3 26 26 H 1.09003 * 109.46759 * 119.99263 * 2 1 3 27 27 H 1.08997 * 109.47799 * 59.99517 * 3 2 1 28 28 H 1.09004 * 109.47084 * 299.99567 * 3 2 1 29 29 H 0.96993 * 119.99987 * 180.02562 * 8 7 5 30 30 H 1.08994 * 109.47623 * 23.27231 * 13 4 3 31 31 H 1.09007 * 109.46766 * 143.27652 * 13 4 3 32 32 H 1.08007 * 119.97878 * 0.02562 * 15 14 13 33 33 H 1.07990 * 119.97123 * 180.25803 * 16 15 14 34 34 H 1.08001 * 119.99210 * 179.76338 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 3.5051 1.4425 0.0006 5 6 4.1903 1.4422 -1.1850 6 1 3.6738 1.2196 -2.1071 7 6 5.5474 1.7335 -1.2024 8 7 6.3229 1.3151 -0.2246 9 14 6.2731 2.7191 -2.6135 10 1 5.1988 3.0681 -3.5775 11 1 6.8860 3.9639 -2.0840 12 1 7.3114 1.9095 -3.3003 13 6 4.2370 1.4427 1.2697 14 6 4.6322 2.8538 1.6214 15 6 5.9684 3.2028 1.6819 16 6 6.3318 4.4981 1.9997 17 6 5.3597 5.4440 2.2678 18 6 4.0225 5.0963 2.2132 19 17 2.8017 6.2837 2.5505 20 6 3.6575 3.7991 1.8894 21 9 2.3514 3.4577 1.8355 22 1 -0.3633 0.5140 0.8899 23 1 -0.3633 0.5138 -0.8901 24 1 -0.3633 -1.0276 0.0005 25 1 1.8934 -0.5139 -0.8898 26 1 1.8933 -0.5137 0.8901 27 1 1.6768 1.9564 0.8899 28 1 1.6768 1.9563 -0.8901 29 1 7.2711 1.5190 -0.2366 30 1 3.6008 1.0369 2.0562 31 1 5.1321 0.8282 1.1730 32 1 6.7290 2.4640 1.4766 33 1 7.3759 4.7703 2.0425 34 1 5.6449 6.4547 2.5197 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000092398470.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:48 Heat of formation + Delta-G solvation = -1.957083 kcal Electronic energy + Delta-G solvation = -19386.219691 eV Core-core repulsion = 16260.390860 eV Total energy + Delta-G solvation = -3125.828832 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -48.28582 -38.53167 -36.43935 -35.82641 -33.18549 -31.21212 -30.29653 -29.61068 -25.80275 -25.59501 -22.47458 -22.04505 -21.12943 -19.77544 -17.44199 -16.65390 -15.88870 -15.43428 -15.22729 -14.82419 -14.32646 -13.88668 -13.65838 -13.17795 -13.02996 -12.89450 -12.48216 -12.39338 -11.90950 -11.37858 -11.31127 -11.06452 -10.93990 -10.84026 -10.78127 -10.66288 -10.36403 -10.25378 -10.06281 -9.90477 -9.60094 -8.61892 -8.06000 -7.89269 -6.96507 -5.94312 -3.14771 1.67829 1.79288 2.45742 3.35503 3.46875 3.51482 4.13613 4.49083 4.76448 5.14400 5.33243 5.42109 5.60466 5.67498 5.77167 5.83479 5.91748 6.05588 6.26944 6.29968 6.41981 6.48943 6.53065 6.59049 6.67674 6.73357 6.95061 7.01003 7.14583 7.26438 7.48308 7.64412 7.78519 8.29805 9.10772 9.78862 10.24569 11.04086 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.013281 B = 0.010081 C = 0.006719 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2107.704452 B = 2776.770632 C = 4166.009424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.144 4.144 3 C 0.136 3.864 4 N -0.589 5.589 5 C -0.251 4.251 6 H 0.079 0.921 7 C 0.013 3.987 8 N -0.881 5.881 9 Si 0.869 3.131 10 H -0.280 1.280 11 H -0.286 1.286 12 H -0.294 1.294 13 C 0.170 3.830 14 C -0.077 4.077 15 C -0.057 4.057 16 C -0.140 4.140 17 C -0.107 4.107 18 C -0.087 4.087 19 Cl -0.080 7.080 20 C 0.106 3.894 21 F -0.129 7.129 22 H 0.047 0.953 23 H 0.048 0.952 24 H 0.043 0.957 25 H 0.057 0.943 26 H 0.051 0.949 27 H 0.060 0.940 28 H 0.043 0.957 29 H 0.254 0.746 30 H 0.028 0.972 31 H 0.135 0.865 32 H 0.159 0.841 33 H 0.124 0.876 34 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.983 4.003 6.039 7.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.184 4.184 3 C 0.009 3.991 4 N -0.308 5.308 5 C -0.378 4.378 6 H 0.097 0.903 7 C -0.185 4.185 8 N -0.527 5.527 9 Si 0.698 3.302 10 H -0.205 1.205 11 H -0.213 1.213 12 H -0.222 1.222 13 C 0.044 3.956 14 C -0.081 4.081 15 C -0.076 4.076 16 C -0.159 4.159 17 C -0.126 4.126 18 C -0.114 4.114 19 Cl -0.052 7.052 20 C 0.085 3.915 21 F -0.107 7.107 22 H 0.066 0.934 23 H 0.067 0.933 24 H 0.062 0.938 25 H 0.075 0.925 26 H 0.070 0.930 27 H 0.078 0.922 28 H 0.062 0.938 29 H 0.065 0.935 30 H 0.046 0.954 31 H 0.152 0.848 32 H 0.176 0.824 33 H 0.142 0.858 34 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -3.005 4.082 6.049 7.892 hybrid contribution 0.086 0.887 -0.896 1.264 sum -2.919 4.969 5.153 7.731 Atomic orbital electron populations 1.21722 0.97323 1.00366 1.01052 1.22159 0.93782 1.00985 1.01495 1.21176 0.84009 0.93484 1.00388 1.44117 0.99821 1.84772 1.02100 1.19196 0.92110 1.40785 0.85738 0.90325 1.24555 0.95730 1.01073 0.97106 1.69970 1.04129 1.43968 1.34601 0.86704 0.78689 0.81887 0.82889 1.20490 1.21286 1.22162 1.20446 0.99271 0.90080 0.85807 1.21245 0.91957 0.99489 0.95365 1.21741 0.96866 0.96209 0.92776 1.21181 0.98806 0.93875 1.01998 1.20699 0.89973 1.00063 1.01869 1.20882 0.90643 0.89252 1.10623 1.98320 1.55579 1.57222 1.94051 1.17469 0.78965 0.91763 1.03270 1.91366 1.33252 1.92241 1.93841 0.93359 0.93307 0.93803 0.92458 0.93041 0.92227 0.93832 0.93472 0.95416 0.84775 0.82359 0.85795 0.85554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.19 9.91 37.16 0.37 -1.82 16 2 C -0.14 -2.64 6.26 -26.73 -0.17 -2.81 16 3 C 0.14 2.82 5.19 -4.04 -0.02 2.80 16 4 N -0.59 -13.98 2.45 -174.60 -0.43 -14.41 16 5 C -0.25 -6.52 9.57 -15.06 -0.14 -6.67 16 6 H 0.08 2.07 8.04 -52.48 -0.42 1.65 16 7 C 0.01 0.33 4.69 -17.43 -0.08 0.25 16 8 N -0.88 -22.01 7.50 55.49 0.42 -21.60 16 9 Si 0.87 20.80 29.68 -169.99 -5.04 15.75 16 10 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 11 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 12 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 13 C 0.17 3.84 5.05 -5.19 -0.03 3.81 16 14 C -0.08 -1.63 5.00 -104.56 -0.52 -2.16 16 15 C -0.06 -1.14 8.52 -39.59 -0.34 -1.48 16 16 C -0.14 -2.41 10.04 -39.58 -0.40 -2.80 16 17 C -0.11 -1.79 9.83 -39.56 -0.39 -2.18 16 18 C -0.09 -1.60 6.33 -39.44 -0.25 -1.85 16 19 Cl -0.08 -1.32 28.62 -51.86 -1.48 -2.81 16 20 C 0.11 2.18 7.15 -39.39 -0.28 1.90 16 21 F -0.13 -2.65 13.06 2.25 0.03 -2.62 16 22 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 23 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 24 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 25 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 26 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 27 H 0.06 1.21 5.13 -51.93 -0.27 0.95 16 28 H 0.04 0.92 8.04 -51.93 -0.42 0.51 16 29 H 0.25 6.10 7.89 -40.82 -0.32 5.78 16 30 H 0.03 0.59 8.02 -51.93 -0.42 0.17 16 31 H 0.14 3.28 5.31 -51.93 -0.28 3.00 16 32 H 0.16 3.23 5.73 -52.48 -0.30 2.93 16 33 H 0.12 1.77 8.06 -52.49 -0.42 1.35 16 34 H 0.13 1.76 8.06 -52.49 -0.42 1.34 16 LS Contribution 295.15 15.07 4.45 4.45 Total: -1.00 -25.79 295.15 -8.49 -34.28 By element: Atomic # 1 Polarization: 4.14 SS G_CDS: -4.18 Total: -0.03 kcal Atomic # 6 Polarization: -10.76 SS G_CDS: -2.25 Total: -13.01 kcal Atomic # 7 Polarization: -35.99 SS G_CDS: -0.01 Total: -36.00 kcal Atomic # 9 Polarization: -2.65 SS G_CDS: 0.03 Total: -2.62 kcal Atomic # 14 Polarization: 20.80 SS G_CDS: -5.04 Total: 15.75 kcal Atomic # 17 Polarization: -1.32 SS G_CDS: -1.48 Total: -2.81 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -25.79 -8.49 -34.28 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000092398470.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.320 kcal (2) G-P(sol) polarization free energy of solvation -25.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds