Wall clock time and date at job start Mon Mar 30 2020 01:20:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09005 * 109.47130 * 2 1 4 4 C 1.50694 * 109.47792 * 239.99769 * 2 1 3 5 5 H 1.08005 * 120.00072 * 239.99843 * 4 2 1 6 6 C 1.37877 * 119.99998 * 59.99484 * 4 2 1 7 7 N 1.31514 * 120.00198 * 0.02562 * 6 4 2 8 8 Si 1.86797 * 120.00148 * 180.02562 * 6 4 2 9 9 H 1.48501 * 109.47331 * 90.00096 * 8 6 4 10 10 H 1.48499 * 109.47475 * 210.00637 * 8 6 4 11 11 H 1.48505 * 109.47294 * 330.00277 * 8 6 4 12 12 N 1.46906 * 109.47115 * 119.99221 * 2 1 3 13 13 C 1.46897 * 110.99590 * 58.95905 * 12 2 1 14 14 C 1.46902 * 110.99903 * 295.00824 * 12 2 1 15 15 C 1.50706 * 109.46577 * 189.99635 * 14 12 2 16 16 C 1.38214 * 120.00579 * 259.71943 * 15 14 12 17 17 C 1.38332 * 120.00896 * 179.79553 * 16 15 14 18 18 Cl 1.73603 * 119.98292 * 180.21098 * 17 16 15 19 19 C 1.38368 * 120.02617 * 0.46337 * 17 16 15 20 20 C 1.38172 * 120.01216 * 359.79284 * 19 17 16 21 21 C 1.38438 * 120.00374 * 80.00093 * 15 14 12 22 22 F 1.35093 * 120.01443 * 359.97438 * 21 15 14 23 23 H 1.08996 * 109.47680 * 300.00682 * 1 2 3 24 24 H 1.09007 * 109.46753 * 60.00757 * 1 2 3 25 25 H 1.09005 * 109.47130 * 179.97438 * 1 2 3 26 26 H 0.96998 * 120.00546 * 179.97438 * 7 6 4 27 27 H 1.09004 * 109.47329 * 296.04977 * 13 12 2 28 28 H 1.09001 * 109.47296 * 56.04489 * 13 12 2 29 29 H 1.08997 * 109.47027 * 176.04633 * 13 12 2 30 30 H 1.09000 * 109.46894 * 69.99868 * 14 12 2 31 31 H 1.09000 * 109.47263 * 309.99435 * 14 12 2 32 32 H 1.08004 * 119.99008 * 0.02562 * 16 15 14 33 33 H 1.08001 * 119.99689 * 179.77214 * 19 17 16 34 34 H 1.07996 * 120.00354 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7104 -1.2303 5 1 2.6534 -1.5885 -1.1312 6 6 1.6994 -0.2395 -2.4826 7 7 0.9436 0.8300 -2.6035 8 14 2.3216 -1.1205 -4.0078 9 1 1.3432 -2.1619 -4.4117 10 1 2.4869 -0.1416 -5.1121 11 1 3.6297 -1.7584 -3.7120 12 7 2.0197 -0.6924 1.1996 13 6 1.5284 -2.0760 1.2461 14 6 1.6485 0.0394 2.4181 15 6 2.3677 -0.5569 3.6007 16 6 1.7061 -1.4297 4.4438 17 6 2.3675 -1.9803 5.5269 18 17 1.5375 -3.0808 6.5823 19 6 3.6886 -1.6503 5.7723 20 6 4.3493 -0.7737 4.9331 21 6 3.6894 -0.2259 3.8460 22 9 4.3349 0.6312 3.0252 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3634 -1.0277 -0.0005 26 1 0.7095 1.1615 -3.4845 27 1 0.4419 -2.0730 1.3348 28 1 1.8168 -2.5949 0.3320 29 1 1.9617 -2.5866 2.1061 30 1 0.5720 -0.0344 2.5725 31 1 1.9295 1.0872 2.3125 32 1 0.6738 -1.6847 4.2548 33 1 4.2034 -2.0776 6.6201 34 1 5.3804 -0.5159 5.1251 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000093090929.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:20:28 Heat of formation + Delta-G solvation = -22.736588 kcal Electronic energy + Delta-G solvation = -18644.569636 eV Core-core repulsion = 15517.839738 eV Total energy + Delta-G solvation = -3126.729899 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.63105 -39.34207 -37.19188 -36.39108 -33.12652 -31.52836 -30.27922 -28.48828 -26.80156 -25.18295 -23.87490 -22.83279 -21.36964 -19.26193 -17.47200 -16.59254 -16.41989 -15.96709 -15.58724 -15.00689 -14.35377 -14.24309 -13.73395 -13.62521 -13.28592 -13.20362 -12.80612 -12.67198 -12.14766 -11.51688 -11.46685 -11.31039 -11.11481 -11.00128 -10.92568 -10.76030 -10.63755 -10.47340 -10.03974 -9.85759 -9.08767 -8.88769 -8.46113 -8.39740 -7.21607 -6.01665 -4.05320 0.99100 1.09200 2.01186 3.30922 3.37635 3.40203 3.43052 4.32051 4.41451 4.60234 4.72913 5.01661 5.08850 5.24050 5.30871 5.56119 5.70422 5.83947 6.01271 6.05516 6.08174 6.20192 6.27824 6.40496 6.64048 6.74996 6.79762 6.86889 7.08343 7.43814 7.68609 7.80825 8.08296 8.34585 8.55238 9.00012 9.59594 11.05532 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.028074 B = 0.004618 C = 0.004375 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 997.138076 B = 6062.188735 C = 6399.046964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.211 3.789 3 H 0.041 0.959 4 C -0.499 4.499 5 H 0.063 0.937 6 C 0.059 3.941 7 N -0.894 5.894 8 Si 0.896 3.104 9 H -0.282 1.282 10 H -0.287 1.287 11 H -0.274 1.274 12 N -0.527 5.527 13 C 0.032 3.968 14 C 0.089 3.911 15 C -0.085 4.085 16 C -0.079 4.079 17 C -0.050 4.050 18 Cl -0.073 7.073 19 C -0.091 4.091 20 C -0.148 4.148 21 C 0.129 3.871 22 F -0.123 7.123 23 H 0.007 0.993 24 H 0.089 0.911 25 H 0.031 0.969 26 H 0.260 0.740 27 H 0.017 0.983 28 H 0.076 0.924 29 H 0.041 0.959 30 H 0.043 0.957 31 H 0.082 0.918 32 H 0.138 0.862 33 H 0.138 0.862 34 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.385 -4.099 16.648 17.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.106 3.894 3 H 0.059 0.941 4 C -0.538 4.538 5 H 0.081 0.919 6 C -0.142 4.142 7 N -0.534 5.534 8 Si 0.725 3.275 9 H -0.208 1.208 10 H -0.213 1.213 11 H -0.198 1.198 12 N -0.251 5.251 13 C -0.116 4.116 14 C -0.039 4.039 15 C -0.087 4.087 16 C -0.098 4.098 17 C -0.077 4.077 18 Cl -0.045 7.045 19 C -0.110 4.110 20 C -0.167 4.167 21 C 0.109 3.891 22 F -0.101 7.101 23 H 0.026 0.974 24 H 0.108 0.892 25 H 0.050 0.950 26 H 0.070 0.930 27 H 0.036 0.964 28 H 0.095 0.905 29 H 0.060 0.940 30 H 0.061 0.939 31 H 0.100 0.900 32 H 0.156 0.844 33 H 0.156 0.844 34 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.774 -4.049 16.512 17.226 hybrid contribution -0.602 -0.384 -0.876 1.130 sum 2.172 -4.433 15.635 16.396 Atomic orbital electron populations 1.22418 1.00775 0.99424 1.00602 1.19340 0.89766 0.94657 0.85679 0.94141 1.21093 1.30610 1.12496 0.89577 0.91914 1.24916 0.95224 0.95106 0.98985 1.69879 1.37085 1.22991 1.23424 0.86519 0.79257 0.79266 0.82502 1.20833 1.21283 1.19838 1.62418 1.59431 1.01968 1.01242 1.22272 0.96765 0.91063 1.01499 1.20978 0.96288 0.98326 0.88330 1.20093 0.93124 0.97940 0.97565 1.20862 1.00652 0.95656 0.92615 1.20828 0.93743 0.97978 0.95118 1.98361 1.78552 1.62169 1.65373 1.20774 0.92517 0.97723 0.99938 1.21067 1.01170 0.99440 0.95044 1.17578 0.90497 0.91513 0.89544 1.91556 1.80850 1.66889 1.70782 0.97381 0.89247 0.95028 0.92994 0.96407 0.90525 0.94005 0.93881 0.89994 0.84391 0.84410 0.84046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -4.10 8.27 37.16 0.31 -3.79 16 2 C 0.21 5.25 2.34 -68.87 -0.16 5.09 16 3 H 0.04 1.11 8.03 -51.93 -0.42 0.70 16 4 C -0.50 -13.55 7.88 -34.44 -0.27 -13.83 16 5 H 0.06 1.72 6.77 -52.48 -0.36 1.36 16 6 C 0.06 1.61 5.30 -17.82 -0.09 1.51 16 7 N -0.89 -25.28 11.32 55.43 0.63 -24.66 16 8 Si 0.90 21.30 29.54 -169.99 -5.02 16.28 16 9 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 10 H -0.29 -6.80 7.11 56.52 0.40 -6.39 16 11 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 12 N -0.53 -11.21 4.73 -237.72 -1.13 -12.33 16 13 C 0.03 0.63 8.51 60.06 0.51 1.14 16 14 C 0.09 1.59 4.26 -4.97 -0.02 1.57 16 15 C -0.09 -1.31 4.57 -104.55 -0.48 -1.79 16 16 C -0.08 -1.04 8.54 -39.56 -0.34 -1.38 16 17 C -0.05 -0.60 6.32 -39.50 -0.25 -0.85 16 18 Cl -0.07 -0.79 28.95 -51.86 -1.50 -2.29 16 19 C -0.09 -0.98 9.83 -39.56 -0.39 -1.37 16 20 C -0.15 -1.75 10.03 -39.52 -0.40 -2.15 16 21 C 0.13 1.93 7.25 -39.42 -0.29 1.65 16 22 F -0.12 -2.10 16.66 2.25 0.04 -2.06 16 23 H 0.01 0.16 6.75 -51.93 -0.35 -0.19 16 24 H 0.09 2.35 6.07 -51.93 -0.32 2.04 16 25 H 0.03 0.72 6.48 -51.93 -0.34 0.39 16 26 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 27 H 0.02 0.33 6.51 -51.93 -0.34 0.00 16 28 H 0.08 1.61 6.41 -51.93 -0.33 1.28 16 29 H 0.04 0.73 6.66 -51.93 -0.35 0.38 16 30 H 0.04 0.74 6.79 -51.93 -0.35 0.39 16 31 H 0.08 1.51 7.80 -51.93 -0.41 1.11 16 32 H 0.14 1.72 8.03 -52.48 -0.42 1.29 16 33 H 0.14 1.13 8.06 -52.49 -0.42 0.71 16 34 H 0.14 1.33 8.06 -52.49 -0.42 0.91 16 LS Contribution 296.36 15.07 4.47 4.47 Total: -1.00 -28.09 296.36 -8.33 -36.42 By element: Atomic # 1 Polarization: 2.31 SS G_CDS: -3.95 Total: -1.64 kcal Atomic # 6 Polarization: -12.31 SS G_CDS: -1.87 Total: -14.18 kcal Atomic # 7 Polarization: -36.49 SS G_CDS: -0.50 Total: -36.99 kcal Atomic # 9 Polarization: -2.10 SS G_CDS: 0.04 Total: -2.06 kcal Atomic # 14 Polarization: 21.30 SS G_CDS: -5.02 Total: 16.28 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.50 Total: -2.29 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.09 -8.33 -36.42 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000093090929.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.685 kcal (2) G-P(sol) polarization free energy of solvation -28.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.422 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds