Wall clock time and date at job start Mon Mar 30 2020 01:18:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08998 * 109.47281 * 2 1 4 4 N 1.46906 * 109.47195 * 240.00084 * 2 1 3 5 5 C 1.46901 * 110.99645 * 84.99734 * 4 2 1 6 6 C 1.52998 * 109.47230 * 179.97438 * 5 4 2 7 7 C 1.50695 * 109.47308 * 180.02562 * 6 5 4 8 8 H 1.08001 * 120.00396 * 0.02562 * 7 6 5 9 9 C 1.37884 * 119.99787 * 180.02562 * 7 6 5 10 10 N 1.31506 * 120.00374 * 0.02562 * 9 7 6 11 11 Si 1.86805 * 119.99592 * 179.97438 * 9 7 6 12 12 H 1.48504 * 109.46695 * 90.00138 * 11 9 7 13 13 H 1.48495 * 109.46857 * 209.99710 * 11 9 7 14 14 H 1.48498 * 109.47499 * 330.00328 * 11 9 7 15 15 C 1.50699 * 109.47155 * 120.00469 * 2 1 3 16 16 C 1.38270 * 119.97533 * 79.72345 * 15 2 1 17 17 C 1.38217 * 120.06064 * 180.27493 * 16 15 2 18 18 C 1.38319 * 120.01180 * 359.97438 * 17 16 15 19 19 Cl 1.73594 * 120.02299 * 180.02562 * 18 17 16 20 20 C 1.38547 * 119.95053 * 0.02562 * 18 17 16 21 21 F 1.35106 * 120.02686 * 180.02562 * 20 18 17 22 22 C 1.38195 * 119.97710 * 259.99862 * 15 2 1 23 23 H 1.08994 * 109.47041 * 299.99733 * 1 2 3 24 24 H 1.09000 * 109.47041 * 59.99567 * 1 2 3 25 25 H 1.09001 * 109.46884 * 179.97438 * 1 2 3 26 26 H 1.00892 * 111.00583 * 208.95262 * 4 2 1 27 27 H 1.08996 * 109.47575 * 300.00587 * 5 4 2 28 28 H 1.08997 * 109.46756 * 60.00451 * 5 4 2 29 29 H 1.08996 * 109.47417 * 300.00802 * 6 5 4 30 30 H 1.09009 * 109.47061 * 60.00247 * 6 5 4 31 31 H 0.96996 * 120.00209 * 180.02562 * 10 9 7 32 32 H 1.08004 * 119.96720 * 0.25369 * 16 15 2 33 33 H 1.07999 * 119.99074 * 180.02562 * 17 16 15 34 34 H 1.07996 * 120.00042 * 359.74707 * 22 15 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0197 -0.6925 -1.1995 5 6 2.0824 0.2227 -2.3469 6 6 2.5962 -0.5327 -3.5742 7 6 2.6612 0.4063 -4.7511 8 1 2.3659 1.4387 -4.6353 9 6 3.0975 -0.0527 -5.9759 10 7 3.4565 -1.3099 -6.1172 11 14 3.1773 1.1111 -7.4350 12 1 4.5134 1.7577 -7.4798 13 1 2.9542 0.3482 -8.6893 14 1 2.1279 2.1525 -7.2956 15 6 2.0324 -0.7105 1.2304 16 6 2.0612 -2.0924 1.2668 17 6 2.5162 -2.7459 2.3965 18 6 2.9439 -2.0177 3.4919 19 17 3.5161 -2.8382 4.9107 20 6 2.9152 -0.6330 3.4560 21 9 3.3331 0.0798 4.5249 22 6 2.4585 0.0195 2.3237 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 2.9173 -1.1205 -1.0289 27 1 1.0871 0.6164 -2.5525 28 1 2.7588 1.0462 -2.1182 29 1 3.5916 -0.9261 -3.3684 30 1 1.9201 -1.3566 -3.8032 31 1 3.7638 -1.6326 -6.9788 32 1 1.7275 -2.6617 0.4117 33 1 2.5387 -3.8254 2.4235 34 1 2.4354 1.0988 2.2946 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000095985220.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:18:39 Heat of formation + Delta-G solvation = -42.373839 kcal Electronic energy + Delta-G solvation = -17680.215415 eV Core-core repulsion = 14552.633981 eV Total energy + Delta-G solvation = -3127.581434 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -49.13783 -39.72371 -37.11135 -36.17210 -33.44068 -31.79133 -30.90157 -29.34790 -28.07606 -24.59448 -23.33982 -23.14418 -20.66306 -20.42216 -17.69812 -16.88740 -16.57056 -16.24829 -15.95121 -15.43286 -14.81906 -14.43841 -14.13206 -13.97660 -13.41024 -13.27816 -12.90579 -12.65891 -12.30152 -12.24532 -12.04129 -11.60198 -11.45792 -11.18928 -11.10164 -11.02431 -10.81594 -10.55461 -10.02796 -9.46582 -9.20477 -9.17886 -8.77008 -8.38900 -7.98301 -6.03021 -4.05792 0.73476 0.88279 1.78218 3.22338 3.29997 3.36511 3.39486 3.81698 4.27528 4.42640 4.55697 4.66788 4.92054 5.02833 5.24275 5.33219 5.38703 5.48279 5.59983 5.73284 5.84243 5.90648 6.01103 6.21499 6.25635 6.31594 6.41919 6.50879 6.92238 7.36792 7.66337 7.73982 7.86866 8.02731 8.39038 9.01335 9.58301 11.08334 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.034889 B = 0.003175 C = 0.003090 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 802.343314 B = 8817.981883 C = 9060.537451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.118 3.882 3 H 0.052 0.948 4 N -0.684 5.684 5 C 0.065 3.935 6 C 0.026 3.974 7 C -0.523 4.523 8 H 0.054 0.946 9 C 0.058 3.942 10 N -0.893 5.893 11 Si 0.892 3.108 12 H -0.281 1.281 13 H -0.286 1.286 14 H -0.274 1.274 15 C -0.047 4.047 16 C -0.096 4.096 17 C -0.083 4.083 18 C -0.079 4.079 19 Cl -0.058 7.058 20 C 0.106 3.894 21 F -0.130 7.130 22 C -0.139 4.139 23 H 0.051 0.949 24 H 0.064 0.936 25 H 0.063 0.937 26 H 0.339 0.661 27 H 0.061 0.939 28 H 0.017 0.983 29 H 0.013 0.987 30 H 0.026 0.974 31 H 0.261 0.739 32 H 0.152 0.848 33 H 0.143 0.857 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.975 -1.164 19.897 20.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C 0.008 3.992 3 H 0.070 0.930 4 N -0.315 5.315 5 C -0.063 4.063 6 C -0.012 4.012 7 C -0.562 4.562 8 H 0.072 0.928 9 C -0.143 4.143 10 N -0.532 5.532 11 Si 0.720 3.280 12 H -0.207 1.207 13 H -0.212 1.212 14 H -0.199 1.199 15 C -0.048 4.048 16 C -0.115 4.115 17 C -0.102 4.102 18 C -0.107 4.107 19 Cl -0.029 7.029 20 C 0.086 3.914 21 F -0.109 7.109 22 C -0.159 4.159 23 H 0.070 0.930 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.157 0.843 27 H 0.079 0.921 28 H 0.035 0.965 29 H 0.032 0.968 30 H 0.044 0.956 31 H 0.070 0.930 32 H 0.170 0.830 33 H 0.161 0.839 34 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -3.469 -1.573 19.756 20.120 hybrid contribution 1.078 1.197 -0.266 1.633 sum -2.391 -0.375 19.490 19.640 Atomic orbital electron populations 1.21780 0.93340 1.02696 1.01399 1.20524 0.96370 0.95396 0.86873 0.92969 1.60783 1.33378 1.33988 1.03377 1.22237 0.99812 0.93513 0.90693 1.19062 0.96244 0.95828 0.90032 1.21163 1.44093 0.96334 0.94586 0.92759 1.24997 0.95371 0.95089 0.98854 1.69961 1.44345 1.14319 1.24548 0.86592 0.78371 0.80880 0.82137 1.20699 1.21178 1.19870 1.20090 0.95699 0.93992 0.95029 1.21249 0.98236 0.93975 0.98023 1.21047 0.97329 1.00757 0.91044 1.21008 1.06977 0.90943 0.91728 1.98378 1.87516 1.78475 1.38528 1.17333 1.01065 0.87627 0.85383 1.91530 1.87705 1.77954 1.53664 1.21038 1.01712 1.01246 0.91861 0.92965 0.91719 0.91747 0.84276 0.92056 0.96472 0.96819 0.95569 0.92954 0.83026 0.83874 0.83943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.61 9.39 37.16 0.35 -1.26 16 2 C 0.12 1.53 2.82 -68.86 -0.19 1.34 16 3 H 0.05 0.68 7.66 -51.93 -0.40 0.28 16 4 N -0.68 -10.95 5.70 -107.95 -0.62 -11.56 16 5 C 0.07 1.29 5.42 -3.82 -0.02 1.27 16 6 C 0.03 0.65 5.23 -27.89 -0.15 0.50 16 7 C -0.52 -14.52 9.11 -34.44 -0.31 -14.83 16 8 H 0.05 1.46 7.74 -52.49 -0.41 1.06 16 9 C 0.06 1.65 5.46 -17.82 -0.10 1.56 16 10 N -0.89 -26.49 13.29 55.43 0.74 -25.75 16 11 Si 0.89 21.36 29.54 -169.99 -5.02 16.34 16 12 H -0.28 -6.64 7.11 56.52 0.40 -6.23 16 13 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 14 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 15 C -0.05 -0.55 4.71 -104.63 -0.49 -1.04 16 16 C -0.10 -1.05 9.01 -39.58 -0.36 -1.40 16 17 C -0.08 -0.84 9.83 -39.56 -0.39 -1.23 16 18 C -0.08 -0.88 6.33 -39.44 -0.25 -1.13 16 19 Cl -0.06 -0.61 28.62 -51.86 -1.48 -2.10 16 20 C 0.11 1.24 7.28 -39.39 -0.29 0.95 16 21 F -0.13 -1.60 16.84 2.25 0.04 -1.56 16 22 C -0.14 -1.54 9.65 -39.52 -0.38 -1.92 16 23 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 24 H 0.06 0.83 7.45 -51.93 -0.39 0.45 16 25 H 0.06 0.77 8.14 -51.93 -0.42 0.35 16 26 H 0.34 5.35 8.00 -39.30 -0.31 5.04 16 27 H 0.06 1.21 7.44 -51.93 -0.39 0.82 16 28 H 0.02 0.34 8.05 -51.93 -0.42 -0.08 16 29 H 0.01 0.36 8.14 -51.93 -0.42 -0.06 16 30 H 0.03 0.71 8.14 -51.92 -0.42 0.28 16 31 H 0.26 7.30 8.31 -40.82 -0.34 6.96 16 32 H 0.15 1.63 7.72 -52.48 -0.41 1.23 16 33 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 34 H 0.14 1.37 8.03 -52.49 -0.42 0.94 16 LS Contribution 310.56 15.07 4.68 4.68 Total: -1.00 -29.03 310.56 -8.63 -37.66 By element: Atomic # 1 Polarization: 3.87 SS G_CDS: -4.39 Total: -0.52 kcal Atomic # 6 Polarization: -14.62 SS G_CDS: -2.58 Total: -17.20 kcal Atomic # 7 Polarization: -37.44 SS G_CDS: 0.12 Total: -37.31 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 0.04 Total: -1.56 kcal Atomic # 14 Polarization: 21.36 SS G_CDS: -5.02 Total: 16.34 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.48 Total: -2.10 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -29.03 -8.63 -37.66 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000095985220.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.710 kcal (2) G-P(sol) polarization free energy of solvation -29.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.664 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.374 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds