Wall clock time and date at job start Mon Mar 30 2020 01:26:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46495 * 109.46986 * 2 1 4 4 C 1.46496 * 120.00628 * 270.00225 * 3 2 1 5 5 C 1.50699 * 109.47598 * 270.00465 * 4 3 2 6 6 H 1.08005 * 119.99628 * 359.97438 * 5 4 3 7 7 C 1.37877 * 120.00538 * 179.97438 * 5 4 3 8 8 N 1.31511 * 119.99774 * 0.02562 * 7 5 4 9 9 Si 1.86801 * 120.00058 * 179.97438 * 7 5 4 10 10 H 1.48495 * 109.46761 * 60.00209 * 9 7 5 11 11 H 1.48496 * 109.46664 * 180.02562 * 9 7 5 12 12 H 1.48496 * 109.47077 * 300.00223 * 9 7 5 13 13 C 1.34774 * 119.99828 * 90.00387 * 3 2 1 14 14 O 1.21279 * 120.00472 * 179.97438 * 13 3 2 15 15 C 1.50706 * 120.00020 * 0.02562 * 13 3 2 16 16 N 1.46496 * 109.47106 * 179.97438 * 15 13 3 17 17 C 1.35051 * 126.03301 * 125.00097 * 16 15 13 18 18 C 1.35378 * 107.72184 * 179.97438 * 17 16 15 19 19 Cl 1.73604 * 126.04254 * 179.97438 * 18 17 16 20 20 C 1.39921 * 107.91113 * 359.97438 * 18 17 16 21 21 N 1.30850 * 108.21531 * 359.75918 * 20 18 17 22 22 H 1.08996 * 109.46936 * 299.99297 * 1 2 3 23 23 H 1.08997 * 109.47532 * 59.99922 * 1 2 3 24 24 H 1.09007 * 109.46741 * 179.97438 * 1 2 3 25 25 H 1.09004 * 109.46898 * 240.00405 * 2 1 3 26 26 H 1.08993 * 109.47182 * 120.00744 * 2 1 3 27 27 H 1.09008 * 109.47096 * 29.99824 * 4 3 2 28 28 H 1.09003 * 109.47776 * 149.99700 * 4 3 2 29 29 H 0.97002 * 119.99965 * 179.97438 * 8 7 5 30 30 H 1.09001 * 109.46953 * 299.99667 * 15 13 3 31 31 H 1.09000 * 109.47318 * 59.99264 * 15 13 3 32 32 H 1.07990 * 126.13914 * 359.93777 * 17 16 15 33 33 H 1.08009 * 125.89161 * 179.97438 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2625 2.0719 -1.2686 5 6 3.6857 1.8352 -1.7038 6 1 4.3428 1.2309 -1.0959 7 6 4.1490 2.3899 -2.8780 8 7 3.3490 3.1261 -3.6179 9 14 5.9134 2.0970 -3.4170 10 1 6.1415 0.6403 -3.5939 11 1 6.1607 2.7971 -4.7030 12 1 6.8406 2.6211 -2.3822 13 6 2.2430 2.0165 1.1672 14 8 2.6477 3.1597 1.1673 15 6 1.9925 1.3058 2.4723 16 7 2.3103 2.2031 3.5858 17 6 1.4807 2.5389 4.5972 18 6 2.1499 3.3844 5.4157 19 17 1.5277 4.1091 6.8653 20 6 3.4318 3.5709 4.8867 21 7 3.5305 2.8590 3.7932 22 1 -0.3633 0.5137 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3633 -1.0278 -0.0005 25 1 1.8933 -0.5138 -0.8901 26 1 1.8934 -0.5139 0.8899 27 1 1.5816 1.6878 -2.0284 28 1 2.0954 3.1412 -1.1383 29 1 3.6750 3.5167 -4.4438 30 1 0.9446 1.0112 2.5303 31 1 2.6229 0.4185 2.5298 32 1 0.4655 2.1951 4.7290 33 1 4.2073 4.1922 5.3100 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000096413702.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:38 Heat of formation + Delta-G solvation = 43.060032 kcal Electronic energy + Delta-G solvation = -18433.407968 eV Core-core repulsion = 15329.451187 eV Total energy + Delta-G solvation = -3103.956781 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.23929 -39.06363 -36.42242 -35.44324 -33.35034 -32.66442 -30.24563 -30.01526 -28.22223 -26.35118 -23.16954 -22.91266 -21.20088 -21.14030 -18.65853 -17.37953 -16.84931 -16.39204 -15.57961 -15.20679 -14.62197 -14.42529 -14.17396 -13.88157 -13.55218 -13.26731 -13.20804 -12.68681 -12.18807 -12.06906 -11.70503 -11.67310 -11.35551 -11.24834 -10.99251 -10.83642 -10.58498 -10.40603 -10.17040 -9.74666 -9.67088 -9.00382 -8.46309 -8.36027 -7.79954 -6.07662 -4.12597 1.74747 1.96091 2.68943 2.79549 3.16245 3.30824 3.35551 3.39782 3.72240 4.41339 4.57304 4.65891 4.78687 4.96176 5.05841 5.22293 5.27263 5.45603 5.50056 5.60071 5.63112 5.87143 6.10723 6.33859 6.41014 6.73252 6.97742 7.35428 7.43492 7.63636 7.87942 8.17894 8.24327 8.80641 8.95452 9.52649 11.00521 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.024044 B = 0.004466 C = 0.003991 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1164.250215 B = 6267.989221 C = 7013.241943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.102 3.898 3 N -0.594 5.594 4 C 0.249 3.751 5 C -0.529 4.529 6 H 0.057 0.943 7 C 0.062 3.938 8 N -0.895 5.895 9 Si 0.899 3.101 10 H -0.277 1.277 11 H -0.286 1.286 12 H -0.276 1.276 13 C 0.492 3.508 14 O -0.510 6.510 15 C 0.112 3.888 16 N -0.346 5.346 17 C 0.068 3.932 18 C -0.187 4.187 19 Cl -0.052 7.052 20 C 0.052 3.948 21 N -0.241 5.241 22 H 0.048 0.952 23 H 0.063 0.937 24 H 0.062 0.938 25 H 0.087 0.913 26 H 0.063 0.937 27 H 0.034 0.966 28 H 0.043 0.957 29 H 0.264 0.736 30 H 0.120 0.880 31 H 0.113 0.887 32 H 0.181 0.819 33 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.150 -6.372 15.706 18.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.022 4.022 3 N -0.327 5.327 4 C 0.130 3.870 5 C -0.567 4.567 6 H 0.075 0.925 7 C -0.140 4.140 8 N -0.534 5.534 9 Si 0.726 3.274 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.201 1.201 13 C 0.275 3.725 14 O -0.384 6.384 15 C -0.013 4.013 16 N -0.128 5.128 17 C -0.079 4.079 18 C -0.226 4.226 19 Cl -0.024 7.024 20 C -0.136 4.136 21 N -0.062 5.062 22 H 0.067 0.933 23 H 0.082 0.918 24 H 0.081 0.919 25 H 0.106 0.894 26 H 0.082 0.918 27 H 0.052 0.948 28 H 0.061 0.939 29 H 0.074 0.926 30 H 0.138 0.862 31 H 0.131 0.869 32 H 0.198 0.802 33 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges -6.267 -6.025 14.512 16.916 hybrid contribution 0.275 0.099 0.359 0.463 sum -5.992 -5.926 14.871 17.093 Atomic orbital electron populations 1.22245 0.96577 1.01657 1.02402 1.21494 0.93618 0.84097 1.03026 1.48257 1.63808 1.13267 1.07398 1.19294 0.96443 0.93583 0.77654 1.21377 0.96840 1.32217 1.06306 0.92465 1.24923 0.97897 0.94813 0.96350 1.69917 1.35792 1.33271 1.14384 0.86549 0.84750 0.78250 0.77848 1.20220 1.21148 1.20113 1.20081 0.80120 0.87522 0.84742 1.90772 1.43857 1.17425 1.86357 1.21809 1.03457 0.91702 0.84316 1.47955 1.09813 1.36415 1.18593 1.22156 0.97467 0.98862 0.89425 1.20688 0.96481 1.09174 0.96248 1.98303 1.87035 1.82310 1.34731 1.23904 0.96402 1.00018 0.93234 1.77747 1.02029 1.10359 1.16023 0.93263 0.91760 0.91871 0.89423 0.91836 0.94789 0.93917 0.92615 0.86181 0.86945 0.80196 0.79420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.93 10.24 37.16 0.38 -1.55 16 2 C 0.10 1.43 5.93 -4.04 -0.02 1.41 16 3 N -0.59 -11.76 2.46 -175.06 -0.43 -12.19 16 4 C 0.25 6.33 5.16 -5.20 -0.03 6.30 16 5 C -0.53 -14.83 9.39 -34.44 -0.32 -15.15 16 6 H 0.06 1.61 7.81 -52.48 -0.41 1.20 16 7 C 0.06 1.78 5.46 -17.82 -0.10 1.68 16 8 N -0.89 -26.47 13.29 55.43 0.74 -25.73 16 9 Si 0.90 21.90 29.54 -169.99 -5.02 16.88 16 10 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 11 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 12 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 13 C 0.49 9.80 7.70 -10.98 -0.08 9.71 16 14 O -0.51 -12.95 15.30 5.56 0.09 -12.87 16 15 C 0.11 1.53 5.54 -5.19 -0.03 1.50 16 16 N -0.35 -5.30 3.40 -62.51 -0.21 -5.51 16 17 C 0.07 0.85 11.43 -17.16 -0.20 0.66 16 18 C -0.19 -2.45 6.65 -39.97 -0.27 -2.72 16 19 Cl -0.05 -0.58 29.30 -51.86 -1.52 -2.10 16 20 C 0.05 0.76 12.02 -17.34 -0.21 0.56 16 21 N -0.24 -4.32 11.66 30.64 0.36 -3.96 16 22 H 0.05 0.50 7.22 -51.93 -0.38 0.12 16 23 H 0.06 0.85 8.14 -51.93 -0.42 0.43 16 24 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 25 H 0.09 1.32 8.07 -51.93 -0.42 0.90 16 26 H 0.06 0.69 6.44 -51.93 -0.33 0.35 16 27 H 0.03 0.87 8.07 -51.92 -0.42 0.45 16 28 H 0.04 1.25 7.42 -51.93 -0.39 0.86 16 29 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 30 H 0.12 1.12 7.12 -51.93 -0.37 0.75 16 31 H 0.11 1.31 7.40 -51.93 -0.38 0.93 16 32 H 0.18 1.50 8.06 -52.49 -0.42 1.08 16 33 H 0.19 2.20 8.06 -52.48 -0.42 1.77 16 LS Contribution 306.04 15.07 4.61 4.61 Total: -1.00 -35.21 306.04 -6.19 -41.40 By element: Atomic # 1 Polarization: 1.00 SS G_CDS: -3.92 Total: -2.93 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: -0.87 Total: 2.40 kcal Atomic # 7 Polarization: -47.85 SS G_CDS: 0.45 Total: -47.40 kcal Atomic # 8 Polarization: -12.95 SS G_CDS: 0.09 Total: -12.87 kcal Atomic # 14 Polarization: 21.90 SS G_CDS: -5.02 Total: 16.88 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.52 Total: -2.10 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -35.21 -6.19 -41.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000096413702.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.460 kcal (2) G-P(sol) polarization free energy of solvation -35.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds