Wall clock time and date at job start Mon Mar 30 2020 01:32:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42901 * 113.99956 * 2 1 4 4 C 1.53001 * 109.46874 * 180.02562 * 3 2 1 5 5 N 1.46904 * 109.47269 * 65.24284 * 4 3 2 6 6 C 1.46904 * 110.99838 * 160.81462 * 5 4 3 7 7 C 1.50695 * 109.46902 * 199.61928 * 6 5 4 8 8 H 1.08007 * 120.00186 * 5.01061 * 7 6 5 9 9 C 1.37875 * 120.00074 * 185.01542 * 7 6 5 10 10 N 1.31516 * 120.00049 * 359.97438 * 9 7 6 11 11 Si 1.86802 * 120.00087 * 180.02562 * 9 7 6 12 12 H 1.48491 * 109.47460 * 89.99557 * 11 9 7 13 13 H 1.48508 * 109.46901 * 209.99692 * 11 9 7 14 14 H 1.48503 * 109.47139 * 329.99260 * 11 9 7 15 15 C 1.38599 * 110.99624 * 284.76571 * 5 4 3 16 16 N 1.32956 * 120.54097 * 301.55257 * 15 5 4 17 17 C 1.31763 * 120.70295 * 180.02562 * 16 15 5 18 18 N 1.31776 * 121.85938 * 359.97438 * 17 16 15 19 19 C 1.32564 * 121.01505 * 0.02562 * 18 17 16 20 20 C 1.38202 * 119.18450 * 0.02562 * 19 18 17 21 21 Cl 1.73596 * 120.84605 * 179.97438 * 20 19 18 22 22 H 1.09003 * 109.46876 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.46965 * 299.99966 * 1 2 3 24 24 H 1.08998 * 109.47536 * 60.00075 * 1 2 3 25 25 H 1.08994 * 109.47548 * 59.99980 * 3 2 1 26 26 H 1.08998 * 109.46652 * 299.99576 * 3 2 1 27 27 H 1.09000 * 109.47133 * 305.24121 * 4 3 2 28 28 H 1.08997 * 109.47021 * 185.24188 * 4 3 2 29 29 H 1.09000 * 109.46769 * 319.61933 * 6 5 4 30 30 H 1.08997 * 109.47267 * 79.61677 * 6 5 4 31 31 H 0.96995 * 120.00134 * 180.02562 * 10 9 7 32 32 H 1.08003 * 119.07628 * 180.02562 * 17 16 15 33 33 H 1.08000 * 120.40374 * 179.72803 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1846 -0.0006 5 7 3.9773 0.5680 -1.2587 6 6 5.3997 0.8387 -1.5065 7 6 5.7030 0.6327 -2.9682 8 1 4.9035 0.4101 -3.6594 9 6 7.0010 0.7282 -3.4231 10 7 7.9745 0.9997 -2.5815 11 14 7.3768 0.4735 -5.2351 12 1 7.2949 1.7749 -5.9454 13 1 8.7445 -0.0860 -5.3830 14 1 6.3900 -0.4712 -5.8173 15 6 3.7235 -0.7946 -1.2598 16 7 4.2442 -1.5796 -0.3216 17 6 4.0054 -2.8754 -0.3199 18 7 3.2487 -3.4445 -1.2365 19 6 2.6939 -2.7289 -2.2047 20 6 2.9171 -1.3657 -2.2478 21 17 2.2125 -0.3874 -3.4968 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 1.6886 1.8464 0.8899 26 1 1.6886 1.8463 -0.8900 27 1 3.8511 0.5646 0.8384 28 1 3.9785 2.1760 0.0932 29 1 5.6271 1.8682 -1.2298 30 1 6.0083 0.1593 -0.9098 31 1 8.8876 1.0673 -2.9015 32 1 4.4414 -3.4885 0.4550 33 1 2.0790 -3.2061 -2.9534 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000097847481.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:32:09 Heat of formation + Delta-G solvation = 13.752014 kcal Electronic energy + Delta-G solvation = -19424.789924 eV Core-core repulsion = 16319.562252 eV Total energy + Delta-G solvation = -3105.227672 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.58548 -37.97883 -36.48181 -35.99226 -32.85414 -32.37484 -30.88798 -29.46940 -26.67763 -25.95658 -24.11706 -23.48660 -22.18005 -20.84234 -17.42969 -17.06229 -16.32939 -16.04908 -15.80609 -15.54928 -14.82418 -14.66618 -14.39326 -14.14861 -13.46200 -13.34319 -12.50086 -12.20267 -11.82166 -11.60238 -11.48737 -11.41263 -11.05034 -10.86241 -10.81032 -10.69912 -10.60404 -10.06880 -9.88239 -9.50460 -9.33327 -8.81426 -8.49430 -8.43679 -7.76831 -6.06392 -4.08090 1.35273 1.53649 2.65384 3.30670 3.36728 3.41341 4.00004 4.16916 4.22046 4.45811 4.55094 4.74068 5.20521 5.27639 5.30169 5.42541 5.48608 5.53999 5.61613 5.70350 5.75668 5.84119 6.03882 6.27841 6.59394 6.99665 7.25223 7.34532 7.38708 7.66471 7.96500 8.02129 8.33299 8.53417 9.00964 9.56561 11.04071 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.019143 B = 0.007685 C = 0.007312 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1462.351007 B = 3642.358875 C = 3828.408781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.386 6.386 3 C 0.064 3.936 4 C 0.057 3.943 5 N -0.488 5.488 6 C 0.196 3.804 7 C -0.513 4.513 8 H 0.071 0.929 9 C 0.059 3.941 10 N -0.896 5.896 11 Si 0.894 3.106 12 H -0.279 1.279 13 H -0.287 1.287 14 H -0.272 1.272 15 C 0.422 3.578 16 N -0.535 5.535 17 C 0.299 3.701 18 N -0.528 5.528 19 C 0.144 3.856 20 C -0.098 4.098 21 Cl -0.037 7.037 22 H 0.077 0.923 23 H 0.034 0.966 24 H 0.040 0.960 25 H 0.047 0.953 26 H 0.059 0.941 27 H 0.055 0.945 28 H 0.094 0.906 29 H 0.037 0.963 30 H 0.017 0.983 31 H 0.262 0.738 32 H 0.190 0.810 33 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.236 -2.646 4.135 14.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.305 6.305 3 C -0.013 4.013 4 C -0.070 4.070 5 N -0.212 5.212 6 C 0.073 3.927 7 C -0.552 4.552 8 H 0.089 0.911 9 C -0.143 4.143 10 N -0.536 5.536 11 Si 0.722 3.278 12 H -0.205 1.205 13 H -0.213 1.213 14 H -0.197 1.197 15 C 0.183 3.817 16 N -0.253 5.253 17 C 0.010 3.990 18 N -0.244 5.244 19 C -0.021 4.021 20 C -0.132 4.132 21 Cl -0.008 7.008 22 H 0.096 0.904 23 H 0.053 0.947 24 H 0.058 0.942 25 H 0.065 0.935 26 H 0.077 0.923 27 H 0.074 0.926 28 H 0.113 0.887 29 H 0.055 0.945 30 H 0.035 0.965 31 H 0.071 0.929 32 H 0.206 0.794 33 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -12.835 -3.009 4.359 13.885 hybrid contribution 0.227 0.435 -1.088 1.193 sum -12.608 -2.574 3.272 13.278 Atomic orbital electron populations 1.22621 0.81863 1.02032 0.99499 1.87920 1.18986 1.28305 1.95297 1.22706 0.94018 0.84621 0.99953 1.22232 0.92819 1.00591 0.91405 1.60342 1.25302 1.03756 1.31840 1.19976 0.77582 0.97266 0.97843 1.21240 0.93073 1.48033 0.92854 0.91077 1.24947 0.96132 0.95311 0.97895 1.69951 1.00182 1.49056 1.34365 0.86544 0.77554 0.78543 0.85175 1.20476 1.21279 1.19714 1.19742 0.85007 0.91007 0.85907 1.68562 1.22995 1.06992 1.26781 1.24582 0.91051 0.88581 0.94800 1.68396 1.11541 1.40105 1.04324 1.22925 0.95186 0.88648 0.95307 1.22396 1.02067 0.93469 0.95244 1.98333 1.81698 1.70814 1.50001 0.90438 0.94695 0.94159 0.93466 0.92261 0.92622 0.88736 0.94518 0.96457 0.92861 0.79382 0.81768 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.43 11.01 101.05 1.11 1.55 16 2 O -0.39 -6.06 8.60 -35.23 -0.30 -6.36 16 3 C 0.06 0.95 6.25 37.16 0.23 1.18 16 4 C 0.06 1.00 5.52 -3.82 -0.02 0.98 16 5 N -0.49 -10.37 3.87 -174.34 -0.67 -11.04 16 6 C 0.20 4.98 4.73 -4.98 -0.02 4.96 16 7 C -0.51 -14.18 8.96 -34.44 -0.31 -14.49 16 8 H 0.07 1.95 7.19 -52.48 -0.38 1.57 16 9 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 10 N -0.90 -26.38 13.29 55.43 0.74 -25.64 16 11 Si 0.89 21.82 29.54 -169.99 -5.02 16.80 16 12 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 13 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 14 H -0.27 -6.59 7.11 56.52 0.40 -6.18 16 15 C 0.42 8.75 3.31 -154.71 -0.51 8.23 16 16 N -0.54 -10.92 9.26 -13.78 -0.13 -11.05 16 17 C 0.30 5.27 12.28 -92.20 -1.13 4.14 16 18 N -0.53 -9.14 10.43 -14.64 -0.15 -9.29 16 19 C 0.14 2.43 11.11 -17.25 -0.19 2.24 16 20 C -0.10 -1.87 5.90 -39.04 -0.23 -2.10 16 21 Cl -0.04 -0.66 27.97 -51.86 -1.45 -2.11 16 22 H 0.08 0.85 8.14 -51.93 -0.42 0.43 16 23 H 0.03 0.35 8.14 -51.93 -0.42 -0.07 16 24 H 0.04 0.45 8.14 -51.93 -0.42 0.03 16 25 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 26 H 0.06 0.89 8.14 -51.93 -0.42 0.46 16 27 H 0.06 1.03 7.43 -51.93 -0.39 0.64 16 28 H 0.09 1.55 7.61 -51.93 -0.40 1.15 16 29 H 0.04 0.96 7.61 -51.93 -0.40 0.56 16 30 H 0.02 0.49 7.62 -51.93 -0.40 0.09 16 31 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 32 H 0.19 2.60 8.06 -52.48 -0.42 2.18 16 33 H 0.17 2.20 8.06 -52.49 -0.42 1.78 16 LS Contribution 301.39 15.07 4.54 4.54 Total: -1.00 -31.27 301.39 -7.67 -38.93 By element: Atomic # 1 Polarization: 1.00 SS G_CDS: -4.04 Total: -3.04 kcal Atomic # 6 Polarization: 9.43 SS G_CDS: -1.17 Total: 8.26 kcal Atomic # 7 Polarization: -56.81 SS G_CDS: -0.22 Total: -57.03 kcal Atomic # 8 Polarization: -6.06 SS G_CDS: -0.30 Total: -6.36 kcal Atomic # 14 Polarization: 21.82 SS G_CDS: -5.02 Total: 16.80 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.45 Total: -2.11 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -31.27 -7.67 -38.93 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000097847481.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.687 kcal (2) G-P(sol) polarization free energy of solvation -31.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.935 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds