Wall clock time and date at job start Mon Mar 30 2020 01:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53001 * 109.47258 * 2 1 4 4 H 1.09002 * 109.46632 * 185.18248 * 3 2 1 5 5 C 1.50699 * 109.47163 * 305.17882 * 3 2 1 6 6 H 1.07999 * 120.00149 * 119.99616 * 5 3 2 7 7 C 1.37875 * 120.00221 * 300.00413 * 5 3 2 8 8 N 1.31516 * 120.00259 * 180.02562 * 7 5 3 9 9 Si 1.86806 * 119.99933 * 359.97438 * 7 5 3 10 10 H 1.48497 * 109.46975 * 90.00221 * 9 7 5 11 11 H 1.48498 * 109.46805 * 210.00329 * 9 7 5 12 12 H 1.48501 * 109.47028 * 330.00152 * 9 7 5 13 13 N 1.46902 * 109.47106 * 65.18071 * 3 2 1 14 14 C 1.46899 * 110.99566 * 85.89856 * 13 3 2 15 15 C 1.50704 * 109.46488 * 174.82374 * 14 13 3 16 16 C 1.38238 * 120.00573 * 105.00433 * 15 14 13 17 17 C 1.38214 * 120.05177 * 179.97438 * 16 15 14 18 18 C 1.38259 * 120.06037 * 359.97438 * 17 16 15 19 19 C 1.38271 * 120.01331 * 0.02562 * 18 17 16 20 20 Cl 1.73605 * 120.02548 * 180.02562 * 19 18 17 21 21 C 1.38406 * 120.00920 * 284.72483 * 15 14 13 22 22 F 1.35097 * 120.02561 * 0.02562 * 21 15 14 23 23 H 1.08995 * 109.47399 * 174.85544 * 1 2 3 24 24 H 1.08998 * 109.47243 * 54.84781 * 1 2 3 25 25 H 1.09004 * 109.47045 * 294.85546 * 1 2 3 26 26 H 1.08996 * 109.46852 * 120.00070 * 2 1 3 27 27 H 1.09003 * 109.46491 * 240.00259 * 2 1 3 28 28 H 0.96998 * 119.99978 * 180.02562 * 8 7 5 29 29 H 1.00899 * 110.99678 * 321.94696 * 13 3 2 30 30 H 1.08995 * 109.47219 * 294.82205 * 14 13 3 31 31 H 1.08999 * 109.47280 * 54.82882 * 14 13 3 32 32 H 1.07999 * 119.97172 * 359.95111 * 16 15 14 33 33 H 1.08002 * 119.97427 * 180.02562 * 17 16 15 34 34 H 1.08006 * 119.99310 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 3.1261 1.4438 -0.0928 5 6 1.4358 2.1890 -1.1613 6 1 0.8267 3.0629 -0.9834 7 6 1.6604 1.7562 -2.4510 8 7 1.1334 2.4080 -3.4645 9 14 2.7144 0.2450 -2.7589 10 1 1.8539 -0.9653 -2.7672 11 1 3.3966 0.3764 -4.0713 12 1 3.7304 0.1225 -1.6828 13 7 1.6552 2.0980 1.2571 14 6 2.6441 1.8363 2.3114 15 6 2.2843 2.6248 3.5443 16 6 1.7275 1.9851 4.6359 17 6 1.3977 2.7073 5.7673 18 6 1.6246 4.0705 5.8094 19 6 2.1814 4.7129 4.7189 20 17 2.4671 6.4245 4.7717 21 6 2.5167 3.9886 3.5860 22 9 3.0656 4.6137 2.5215 23 1 -0.3634 -1.0235 -0.0921 24 1 -0.3633 0.5917 -0.8402 25 1 -0.3633 0.4320 0.9325 26 1 1.8933 -0.5138 0.8900 27 1 1.8933 -0.5138 -0.8901 28 1 1.2911 2.1033 -4.3718 29 1 0.7326 1.8102 1.5472 30 1 2.6490 0.7726 2.5490 31 1 3.6330 2.1357 1.9644 32 1 1.5497 0.9203 4.6045 33 1 0.9631 2.2062 6.6196 34 1 1.3668 4.6337 6.6942 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000164868929.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:10:38 Heat of formation + Delta-G solvation = -24.572949 kcal Electronic energy + Delta-G solvation = -18547.234081 eV Core-core repulsion = 15420.424552 eV Total energy + Delta-G solvation = -3126.809529 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.62389 -39.26637 -37.00898 -36.44630 -33.27917 -31.71554 -30.47500 -29.99005 -27.01706 -24.75864 -23.21550 -22.80279 -21.47773 -19.59273 -17.64132 -16.76119 -16.51685 -15.97421 -15.57155 -15.06862 -14.77814 -14.53404 -13.74828 -13.32741 -13.25444 -13.17034 -12.93413 -12.76920 -12.46290 -12.37959 -11.71624 -11.51028 -11.39860 -11.12181 -10.90815 -10.76003 -10.52752 -10.42398 -9.89463 -9.41739 -9.15600 -8.89223 -8.64756 -8.52725 -7.48203 -6.02824 -3.98734 0.93056 1.04898 1.97966 3.25807 3.34856 3.37781 3.38418 4.16565 4.41331 4.59918 4.68215 4.98460 5.02783 5.23889 5.28401 5.37802 5.64948 5.82362 5.87743 5.93478 5.99089 6.00408 6.09881 6.15028 6.27426 6.50268 6.66723 6.75062 6.77941 6.96525 7.26183 7.70077 7.86174 8.26031 8.69953 9.09501 9.59513 11.10627 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.026792 B = 0.005017 C = 0.004517 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1044.822078 B = 5579.953453 C = 6197.937840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.159 4.159 3 C 0.187 3.813 4 H 0.034 0.966 5 C -0.489 4.489 6 H 0.082 0.918 7 C 0.070 3.930 8 N -0.900 5.900 9 Si 0.880 3.120 10 H -0.279 1.279 11 H -0.297 1.297 12 H -0.270 1.270 13 N -0.664 5.664 14 C 0.094 3.906 15 C -0.097 4.097 16 C -0.085 4.085 17 C -0.124 4.124 18 C -0.090 4.090 19 C -0.080 4.080 20 Cl -0.057 7.057 21 C 0.139 3.861 22 F -0.111 7.111 23 H 0.030 0.970 24 H 0.082 0.918 25 H 0.040 0.960 26 H 0.032 0.968 27 H 0.050 0.950 28 H 0.263 0.737 29 H 0.334 0.666 30 H 0.036 0.964 31 H 0.081 0.919 32 H 0.135 0.865 33 H 0.135 0.865 34 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.487 -0.749 19.385 19.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.198 4.198 3 C 0.078 3.922 4 H 0.052 0.948 5 C -0.527 4.527 6 H 0.100 0.900 7 C -0.132 4.132 8 N -0.539 5.539 9 Si 0.711 3.289 10 H -0.206 1.206 11 H -0.224 1.224 12 H -0.196 1.196 13 N -0.295 5.295 14 C -0.036 4.036 15 C -0.099 4.099 16 C -0.104 4.104 17 C -0.143 4.143 18 C -0.109 4.109 19 C -0.108 4.108 20 Cl -0.028 7.028 21 C 0.119 3.881 22 F -0.089 7.089 23 H 0.049 0.951 24 H 0.101 0.899 25 H 0.059 0.941 26 H 0.051 0.949 27 H 0.068 0.932 28 H 0.073 0.927 29 H 0.153 0.847 30 H 0.054 0.946 31 H 0.099 0.901 32 H 0.153 0.847 33 H 0.153 0.847 34 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.803 0.056 18.945 19.031 hybrid contribution 0.471 -1.574 -0.272 1.665 sum 2.274 -1.518 18.674 18.873 Atomic orbital electron populations 1.21652 0.95717 0.99629 1.02522 1.22509 0.97336 1.00977 0.98970 1.19729 0.96097 0.88207 0.88176 0.94810 1.20870 1.31176 1.12708 0.87990 0.89980 1.24885 0.95527 0.96599 0.96143 1.69879 1.45029 1.40177 0.98809 0.86981 0.81162 0.83884 0.76914 1.20649 1.22418 1.19568 1.60662 1.03676 1.62839 1.02332 1.20869 0.98287 0.95479 0.88920 1.20119 1.00327 0.91949 0.97494 1.21094 0.96709 1.00545 0.92031 1.21070 1.01194 0.93239 0.98772 1.20892 0.98287 0.94821 0.96925 1.21032 1.07280 0.86125 0.96324 1.98377 1.94901 1.10998 1.98524 1.17254 0.97294 0.90156 0.83434 1.91604 1.81973 1.81932 1.53392 0.95069 0.89948 0.94108 0.94909 0.93207 0.92719 0.84742 0.94553 0.90070 0.84744 0.84710 0.84410 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.68 9.40 37.16 0.35 -2.33 16 2 C -0.16 -3.29 5.22 -26.73 -0.14 -3.43 16 3 C 0.19 4.28 1.93 -68.86 -0.13 4.15 16 4 H 0.03 0.82 6.76 -51.93 -0.35 0.47 16 5 C -0.49 -13.48 7.83 -34.44 -0.27 -13.75 16 6 H 0.08 2.53 8.06 -52.49 -0.42 2.11 16 7 C 0.07 1.98 5.42 -17.82 -0.10 1.88 16 8 N -0.90 -27.38 13.96 55.43 0.77 -26.61 16 9 Si 0.88 21.69 24.32 -169.99 -4.13 17.56 16 10 H -0.28 -6.70 6.91 56.52 0.39 -6.31 16 11 H -0.30 -7.40 7.11 56.52 0.40 -7.00 16 12 H -0.27 -6.39 6.53 56.52 0.37 -6.03 16 13 N -0.66 -13.23 6.19 -109.22 -0.68 -13.91 16 14 C 0.09 1.53 5.32 -4.97 -0.03 1.51 16 15 C -0.10 -1.40 5.44 -104.56 -0.57 -1.96 16 16 C -0.09 -0.94 9.66 -39.59 -0.38 -1.32 16 17 C -0.12 -1.17 10.04 -39.58 -0.40 -1.57 16 18 C -0.09 -0.94 9.83 -39.56 -0.39 -1.33 16 19 C -0.08 -1.06 6.33 -39.44 -0.25 -1.31 16 20 Cl -0.06 -0.73 28.62 -51.86 -1.48 -2.22 16 21 C 0.14 2.17 7.22 -39.39 -0.28 1.89 16 22 F -0.11 -2.04 16.32 2.25 0.04 -2.01 16 23 H 0.03 0.53 8.14 -51.93 -0.42 0.11 16 24 H 0.08 1.86 6.85 -51.93 -0.36 1.50 16 25 H 0.04 0.70 6.63 -51.93 -0.34 0.35 16 26 H 0.03 0.59 7.50 -51.93 -0.39 0.20 16 27 H 0.05 1.11 3.42 -51.93 -0.18 0.93 16 28 H 0.26 7.54 8.31 -40.82 -0.34 7.20 16 29 H 0.33 6.26 6.69 -39.29 -0.26 6.00 16 30 H 0.04 0.53 7.34 -51.93 -0.38 0.15 16 31 H 0.08 1.41 7.86 -51.93 -0.41 1.00 16 32 H 0.13 1.21 8.00 -52.49 -0.42 0.79 16 33 H 0.14 0.85 8.06 -52.49 -0.42 0.43 16 34 H 0.14 1.08 8.06 -52.48 -0.42 0.66 16 LS Contribution 295.32 15.07 4.45 4.45 Total: -1.00 -30.17 295.32 -7.58 -37.75 By element: Atomic # 1 Polarization: 6.52 SS G_CDS: -3.96 Total: 2.56 kcal Atomic # 6 Polarization: -14.99 SS G_CDS: -2.59 Total: -17.58 kcal Atomic # 7 Polarization: -40.62 SS G_CDS: 0.10 Total: -40.52 kcal Atomic # 9 Polarization: -2.04 SS G_CDS: 0.04 Total: -2.01 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -4.13 Total: 17.56 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.48 Total: -2.22 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -30.17 -7.58 -37.75 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000164868929.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.176 kcal (2) G-P(sol) polarization free energy of solvation -30.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.749 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds