Wall clock time and date at job start Mon Mar 30 2020 01:29:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46500 * 119.99823 * 2 1 4 4 C 1.52999 * 109.47266 * 269.99659 * 3 2 1 5 5 C 1.53003 * 109.47096 * 180.02562 * 4 3 2 6 6 C 1.50701 * 109.46855 * 180.02562 * 5 4 3 7 7 H 1.08003 * 120.00160 * 359.97438 * 6 5 4 8 8 C 1.37876 * 119.99806 * 180.02562 * 6 5 4 9 9 N 1.31515 * 120.00248 * 359.97438 * 8 6 5 10 10 Si 1.86795 * 120.00028 * 180.02562 * 8 6 5 11 11 H 1.48503 * 109.47522 * 89.99661 * 10 8 6 12 12 H 1.48502 * 109.47371 * 209.99815 * 10 8 6 13 13 H 1.48501 * 109.47335 * 329.99760 * 10 8 6 14 14 C 1.39815 * 119.99906 * 180.02562 * 2 1 3 15 15 C 1.38899 * 120.04196 * 179.97438 * 14 2 1 16 16 C 1.38119 * 119.97331 * 179.97438 * 15 14 2 17 17 C 1.38451 * 120.06259 * 0.02562 * 16 15 14 18 18 F 1.35103 * 119.95896 * 180.27747 * 17 16 15 19 19 C 1.38565 * 120.08616 * 0.02562 * 17 16 15 20 20 Cl 1.73603 * 119.98470 * 179.97438 * 19 17 16 21 21 C 1.38237 * 120.02353 * 359.97438 * 19 17 16 22 22 H 1.09001 * 109.47377 * 270.00066 * 1 2 3 23 23 H 1.09003 * 109.47039 * 30.00283 * 1 2 3 24 24 H 1.09004 * 109.47024 * 149.99764 * 1 2 3 25 25 H 1.08998 * 109.47374 * 30.00285 * 3 2 1 26 26 H 1.09000 * 109.46828 * 150.00038 * 3 2 1 27 27 H 1.08998 * 109.47435 * 300.00588 * 4 3 2 28 28 H 1.09000 * 109.46888 * 60.00416 * 4 3 2 29 29 H 1.09004 * 109.46909 * 300.00230 * 5 4 3 30 30 H 1.09000 * 109.47079 * 60.00329 * 5 4 3 31 31 H 0.96996 * 120.00281 * 180.02562 * 9 8 6 32 32 H 1.07998 * 120.01596 * 0.02562 * 15 14 2 33 33 H 1.07995 * 119.97053 * 180.02562 * 16 15 14 34 34 H 1.08002 * 120.02604 * 180.02562 * 21 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2687 0.0000 4 6 2.4525 1.7104 -1.4425 5 6 3.2181 3.0352 -1.4424 6 6 3.4687 3.4705 -2.8633 7 1 3.1176 2.8628 -3.6842 8 6 4.1473 4.6439 -3.1152 9 7 4.5754 5.3836 -2.1156 10 14 4.4574 5.1839 -4.8763 11 1 3.3277 6.0281 -5.3415 12 1 5.7184 5.9658 -4.9396 13 1 4.5727 3.9872 -5.7480 14 6 2.1640 -1.2108 -0.0005 15 6 3.5530 -1.2119 -0.0011 16 6 4.2422 -2.4089 -0.0011 17 6 3.5498 -3.6078 -0.0011 18 9 4.2260 -4.7774 0.0046 19 6 2.1641 -3.6097 -0.0016 20 17 1.2986 -5.1146 -0.0023 21 6 1.4708 -2.4138 -0.0016 22 1 -0.3634 0.0000 1.0277 23 1 -0.3633 0.8900 -0.5139 24 1 -0.3633 -0.8900 -0.5139 25 1 1.6084 2.0284 0.5139 26 1 3.1499 1.1384 0.5138 27 1 3.0416 0.9508 -1.9563 28 1 1.5001 1.8408 -1.9563 29 1 2.6293 3.7950 -0.9284 30 1 4.1705 2.9044 -0.9287 31 1 5.0524 6.2094 -2.2928 32 1 4.0940 -0.2771 -0.0007 33 1 5.3221 -2.4096 -0.0011 34 1 0.3908 -2.4152 -0.0016 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000181509869.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:29:59 Heat of formation + Delta-G solvation = -32.933924 kcal Electronic energy + Delta-G solvation = -17875.479779 eV Core-core repulsion = 14748.307690 eV Total energy + Delta-G solvation = -3127.172088 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.72292 -39.67715 -37.01670 -36.08400 -33.79781 -31.85250 -30.83561 -29.45793 -27.62839 -25.35341 -23.43874 -22.69807 -21.06672 -20.16309 -18.07202 -16.82978 -16.69421 -16.15329 -15.61289 -15.28737 -14.79784 -14.39356 -14.36548 -14.00139 -13.63463 -13.18058 -12.90115 -12.74214 -12.41069 -12.21146 -12.00911 -11.66735 -11.51938 -11.23599 -10.97244 -10.89897 -10.76328 -10.59935 -9.83799 -9.76900 -9.41141 -9.15908 -8.96313 -8.41255 -7.21571 -6.06211 -4.08897 1.03491 1.26916 1.92744 3.16047 3.28205 3.34983 3.38589 3.54276 4.24722 4.41479 4.65414 4.96493 5.09650 5.13162 5.29653 5.33804 5.40820 5.50637 5.63552 5.69718 5.81835 5.95066 5.99134 6.07557 6.21127 6.44120 6.57858 6.67454 6.97079 7.29256 7.43880 7.57785 7.70313 7.92399 8.35329 8.97725 9.55873 11.04872 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.027151 B = 0.003658 C = 0.003462 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1031.004071 B = 7651.586651 C = 8085.274658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.089 3.911 2 N -0.621 5.621 3 C 0.117 3.883 4 C -0.127 4.127 5 C 0.023 3.977 6 C -0.521 4.521 7 H 0.054 0.946 8 C 0.058 3.942 9 N -0.895 5.895 10 Si 0.891 3.109 11 H -0.280 1.280 12 H -0.286 1.286 13 H -0.274 1.274 14 C 0.231 3.769 15 C -0.163 4.163 16 C -0.088 4.088 17 C 0.033 3.967 18 F -0.139 7.139 19 C -0.021 4.021 20 Cl -0.062 7.062 21 C -0.177 4.177 22 H 0.049 0.951 23 H 0.073 0.927 24 H 0.065 0.935 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.052 0.948 28 H 0.050 0.950 29 H 0.016 0.984 30 H 0.017 0.983 31 H 0.261 0.739 32 H 0.145 0.855 33 H 0.143 0.857 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.402 -15.665 6.801 18.238 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 N -0.328 5.328 3 C -0.005 4.005 4 C -0.166 4.166 5 C -0.014 4.014 6 C -0.559 4.559 7 H 0.073 0.927 8 C -0.144 4.144 9 N -0.535 5.535 10 Si 0.719 3.281 11 H -0.207 1.207 12 H -0.212 1.212 13 H -0.199 1.199 14 C 0.125 3.875 15 C -0.185 4.185 16 C -0.108 4.108 17 C 0.011 3.989 18 F -0.117 7.117 19 C -0.049 4.049 20 Cl -0.033 7.033 21 C -0.201 4.201 22 H 0.067 0.933 23 H 0.092 0.908 24 H 0.084 0.916 25 H 0.093 0.907 26 H 0.092 0.908 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.034 0.966 30 H 0.035 0.965 31 H 0.071 0.929 32 H 0.162 0.838 33 H 0.160 0.840 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -6.489 -15.470 6.850 18.121 hybrid contribution 0.198 0.120 -1.031 1.057 sum -6.291 -15.350 5.819 17.580 Atomic orbital electron populations 1.21686 0.79682 1.02961 1.01065 1.46825 1.05100 1.03174 1.77749 1.21851 0.96404 0.82856 0.99402 1.22070 1.00711 1.00275 0.93529 1.19051 0.94918 0.90171 0.97296 1.21212 1.35913 1.06373 0.92429 0.92747 1.25011 0.95673 0.96625 0.97054 1.69951 1.38599 1.14248 1.30660 0.86604 0.77688 0.78724 0.85064 1.20661 1.21167 1.19855 1.17728 0.91166 0.85785 0.92798 1.20828 0.92238 0.98818 1.06637 1.20873 1.00722 0.89954 0.99259 1.17100 0.87870 0.82113 1.11802 1.91477 1.79852 1.45740 1.94677 1.20597 0.90402 0.87978 1.05905 1.98364 1.76495 1.31548 1.96900 1.20333 1.00294 0.88804 1.10638 0.93264 0.90838 0.91610 0.90716 0.90764 0.92935 0.93150 0.96552 0.96478 0.92944 0.83777 0.83968 0.84276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.93 10.19 59.85 0.61 1.54 16 2 N -0.62 -8.20 3.01 -179.60 -0.54 -8.74 16 3 C 0.12 1.74 5.16 -4.04 -0.02 1.72 16 4 C -0.13 -2.40 5.48 -26.73 -0.15 -2.55 16 5 C 0.02 0.56 4.97 -27.88 -0.14 0.42 16 6 C -0.52 -14.30 9.11 -34.44 -0.31 -14.62 16 7 H 0.05 1.47 7.74 -52.48 -0.41 1.06 16 8 C 0.06 1.61 5.46 -17.82 -0.10 1.52 16 9 N -0.90 -26.18 13.29 55.43 0.74 -25.45 16 10 Si 0.89 21.27 29.54 -169.99 -5.02 16.25 16 11 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 12 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 13 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 14 C 0.23 3.07 6.55 -83.75 -0.55 2.53 16 15 C -0.16 -2.16 9.21 -39.38 -0.36 -2.52 16 16 C -0.09 -1.10 10.02 -39.55 -0.40 -1.50 16 17 C 0.03 0.45 7.27 -39.38 -0.29 0.16 16 18 F -0.14 -1.92 16.83 2.25 0.04 -1.88 16 19 C -0.02 -0.27 6.32 -39.46 -0.25 -0.52 16 20 Cl -0.06 -0.73 28.61 -51.86 -1.48 -2.22 16 21 C -0.18 -2.18 8.99 -39.36 -0.35 -2.54 16 22 H 0.05 0.45 8.14 -51.93 -0.42 0.03 16 23 H 0.07 0.76 8.07 -51.93 -0.42 0.34 16 24 H 0.07 0.61 6.20 -51.93 -0.32 0.29 16 25 H 0.07 1.07 8.07 -51.93 -0.42 0.65 16 26 H 0.07 1.08 6.20 -51.93 -0.32 0.76 16 27 H 0.05 1.02 8.14 -51.93 -0.42 0.60 16 28 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 29 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 30 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 31 H 0.26 7.22 8.31 -40.82 -0.34 6.88 16 32 H 0.14 1.91 6.14 -52.49 -0.32 1.59 16 33 H 0.14 1.48 8.06 -52.49 -0.42 1.06 16 34 H 0.14 1.47 6.14 -52.49 -0.32 1.15 16 LS Contribution 306.96 15.07 4.63 4.63 Total: -1.00 -29.25 306.96 -8.15 -37.40 By element: Atomic # 1 Polarization: 0.56 SS G_CDS: -4.20 Total: -3.64 kcal Atomic # 6 Polarization: -14.05 SS G_CDS: -2.30 Total: -16.35 kcal Atomic # 7 Polarization: -34.38 SS G_CDS: 0.20 Total: -34.19 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 0.04 Total: -1.88 kcal Atomic # 14 Polarization: 21.27 SS G_CDS: -5.02 Total: 16.25 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.48 Total: -2.22 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -29.25 -8.15 -37.40 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000181509869.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.471 kcal (2) G-P(sol) polarization free energy of solvation -29.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.780 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.405 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.934 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds