Wall clock time and date at job start Mon Mar 30 2020 00:50:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.46497 * 120.00207 * 2 1 4 4 C 1.50692 * 109.47385 * 89.99718 * 3 2 1 5 5 H 1.08003 * 120.00338 * 359.97438 * 4 3 2 6 6 C 1.37882 * 120.00242 * 180.02562 * 4 3 2 7 7 N 1.31518 * 119.99534 * 0.02562 * 6 4 3 8 8 Si 1.86797 * 120.00254 * 179.97438 * 6 4 3 9 9 H 1.48497 * 109.46946 * 59.99653 * 8 6 4 10 10 H 1.48493 * 109.47465 * 179.97438 * 8 6 4 11 11 H 1.48502 * 109.47091 * 299.99983 * 8 6 4 12 12 C 1.34778 * 120.00014 * 179.72176 * 2 1 3 13 13 O 1.21585 * 120.00445 * 186.90656 * 12 2 1 14 14 C 1.47613 * 119.99832 * 6.89977 * 12 2 1 15 15 C 1.39719 * 120.07416 * 20.54357 * 14 12 2 16 16 C 1.37936 * 119.92594 * 179.81423 * 15 14 12 17 17 F 1.35101 * 119.96238 * 180.23386 * 16 15 14 18 18 C 1.39093 * 120.06924 * 0.43291 * 16 15 14 19 19 O 1.35817 * 119.91866 * 179.76966 * 18 16 15 20 20 C 1.39094 * 120.15521 * 359.79835 * 18 16 15 21 21 F 1.35100 * 119.96145 * 179.97438 * 20 18 16 22 22 C 1.37933 * 120.07272 * 359.97438 * 20 18 16 23 23 H 1.09003 * 109.46868 * 85.90217 * 1 2 3 24 24 H 1.08994 * 109.47419 * 205.89706 * 1 2 3 25 25 H 1.08999 * 109.47141 * 325.90173 * 1 2 3 26 26 H 1.09002 * 109.47061 * 210.00077 * 3 2 1 27 27 H 1.08998 * 109.47015 * 329.99340 * 3 2 1 28 28 H 0.97002 * 119.99640 * 180.02562 * 7 6 4 29 29 H 1.08004 * 120.03640 * 0.02562 * 15 14 12 30 30 H 0.96704 * 113.99882 * 270.02526 * 19 18 16 31 31 H 1.07997 * 120.03662 * 179.97438 * 22 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4486 1.7038 1.4207 5 1 2.0973 1.0963 2.2417 6 6 3.1260 2.8780 1.6727 7 7 3.5525 3.6185 0.6729 8 14 3.4367 3.4177 3.4338 9 1 4.2393 2.3831 4.1342 10 1 4.1793 4.7036 3.4338 11 1 2.1389 3.5950 4.1334 12 6 2.1389 -1.1672 0.0057 13 8 3.3481 -1.1705 0.1323 14 6 1.4088 -2.4416 -0.1417 15 6 0.1297 -2.4549 -0.7037 16 6 -0.5482 -3.6480 -0.8435 17 9 -1.7832 -3.6622 -1.3912 18 6 0.0366 -4.8359 -0.4174 19 8 -0.6356 -6.0083 -0.5523 20 6 1.3078 -4.8258 0.1469 21 9 1.8719 -5.9818 0.5599 22 6 1.9932 -3.6368 0.2853 23 1 -0.3633 0.0734 -1.0251 24 1 -0.3634 -0.9244 0.4488 25 1 -0.3633 0.8510 0.5761 26 1 3.1499 1.1383 -0.5139 27 1 1.6085 2.0283 -0.5139 28 1 4.0293 4.4444 0.8502 29 1 -0.3264 -1.5323 -1.0315 30 1 -1.1865 -6.2357 0.2093 31 1 2.9800 -3.6295 0.7240 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000183478887.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:50:01 Heat of formation + Delta-G solvation = -114.397192 kcal Electronic energy + Delta-G solvation = -20360.100247 eV Core-core repulsion = 16665.226176 eV Total energy + Delta-G solvation = -3694.874070 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -49.20143 -49.15846 -40.22106 -38.71882 -36.74394 -35.23325 -32.79158 -30.73779 -30.31491 -27.76126 -26.42162 -24.18138 -23.17492 -22.42114 -19.71952 -18.98963 -17.92762 -17.61862 -16.67977 -16.62688 -16.20013 -15.77601 -15.50310 -15.43770 -15.16354 -14.70465 -14.46629 -14.30967 -13.43480 -13.29393 -13.19812 -12.54350 -12.41085 -12.33666 -11.87788 -11.47158 -11.28304 -10.97777 -10.85551 -10.62318 -10.23733 -9.75769 -9.31616 -9.02534 -8.95522 -8.49658 -7.85308 -6.11083 -4.16246 0.34569 0.70238 2.66530 3.26511 3.28659 3.33505 3.36198 3.55884 3.69347 3.88137 4.13965 4.38500 4.48920 4.58110 4.82695 5.22627 5.25224 5.40903 5.44665 5.49410 5.63122 5.71799 5.91917 6.06224 6.30782 6.88856 7.12398 7.27873 7.35410 7.83863 8.12271 8.15923 8.70962 8.89368 9.48898 10.97136 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.029911 B = 0.004578 C = 0.004249 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 935.892268 B = 6114.971604 C = 6588.488398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.589 5.589 3 C 0.246 3.754 4 C -0.529 4.529 5 H 0.058 0.942 6 C 0.063 3.937 7 N -0.894 5.894 8 Si 0.900 3.100 9 H -0.276 1.276 10 H -0.286 1.286 11 H -0.277 1.277 12 C 0.544 3.456 13 O -0.522 6.522 14 C -0.068 4.068 15 C -0.143 4.143 16 C 0.095 3.905 17 F -0.123 7.123 18 C 0.050 3.950 19 O -0.477 6.477 20 C 0.096 3.904 21 F -0.123 7.123 22 C -0.096 4.096 23 H 0.055 0.945 24 H 0.072 0.928 25 H 0.079 0.921 26 H 0.046 0.954 27 H 0.038 0.962 28 H 0.265 0.735 29 H 0.177 0.823 30 H 0.394 0.606 31 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.680 -14.208 -1.731 17.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.320 5.320 3 C 0.127 3.873 4 C -0.568 4.568 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.533 5.533 8 Si 0.727 3.273 9 H -0.201 1.201 10 H -0.211 1.211 11 H -0.202 1.202 12 C 0.330 3.670 13 O -0.399 6.399 14 C -0.071 4.071 15 C -0.161 4.161 16 C 0.075 3.925 17 F -0.101 7.101 18 C 0.003 3.997 19 O -0.287 6.287 20 C 0.076 3.924 21 F -0.101 7.101 22 C -0.116 4.116 23 H 0.073 0.927 24 H 0.090 0.910 25 H 0.098 0.902 26 H 0.064 0.936 27 H 0.056 0.944 28 H 0.075 0.925 29 H 0.194 0.806 30 H 0.251 0.749 31 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -9.689 -14.051 -2.263 17.217 hybrid contribution -0.296 0.084 1.394 1.428 sum -9.985 -13.968 -0.868 17.191 Atomic orbital electron populations 1.22312 0.81647 1.03361 1.00567 1.48098 1.06211 1.07637 1.70060 1.19397 0.92509 0.77489 0.97902 1.21352 1.36991 1.06401 0.92075 0.92365 1.24929 0.95214 0.96293 0.97551 1.69916 1.38147 1.14361 1.30864 0.86531 0.78397 0.77863 0.84486 1.20124 1.21127 1.20223 1.17830 0.87223 0.82896 0.79099 1.90809 1.13488 1.86522 1.49099 1.20001 0.93565 0.94945 0.98635 1.22442 0.94735 0.98672 1.00296 1.17567 0.82046 0.92763 1.00125 1.91537 1.38551 1.97157 1.82895 1.18466 0.91936 0.85803 1.03487 1.84871 1.63242 1.35301 1.45274 1.17537 0.92188 0.82505 1.00143 1.91539 1.84323 1.46403 1.87843 1.21285 1.01546 0.89198 0.99532 0.92653 0.90986 0.90233 0.93616 0.94445 0.92544 0.80627 0.74893 0.82283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.92 8.65 59.84 0.52 1.44 16 2 N -0.59 -11.74 2.86 -184.18 -0.53 -12.27 16 3 C 0.25 6.12 5.13 -5.20 -0.03 6.09 16 4 C -0.53 -14.50 9.38 -34.44 -0.32 -14.83 16 5 H 0.06 1.59 7.81 -52.48 -0.41 1.18 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 7 N -0.89 -25.86 13.29 55.43 0.74 -25.12 16 8 Si 0.90 21.35 29.54 -169.99 -5.02 16.32 16 9 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 10 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 11 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 12 C 0.54 10.84 7.50 -12.43 -0.09 10.74 16 13 O -0.52 -12.62 16.18 5.29 0.09 -12.53 16 14 C -0.07 -1.02 5.57 -104.96 -0.58 -1.61 16 15 C -0.14 -1.76 7.56 -39.14 -0.30 -2.06 16 16 C 0.10 1.12 7.30 -39.37 -0.29 0.83 16 17 F -0.12 -1.43 17.10 2.25 0.04 -1.39 16 18 C 0.05 0.59 6.72 -38.95 -0.26 0.33 16 19 O -0.48 -4.93 13.21 -19.17 -0.25 -5.18 16 20 C 0.10 1.22 7.30 -39.38 -0.29 0.93 16 21 F -0.12 -1.57 17.10 2.25 0.04 -1.53 16 22 C -0.10 -1.34 9.55 -39.14 -0.37 -1.71 16 23 H 0.06 0.65 7.04 -51.93 -0.37 0.28 16 24 H 0.07 0.86 5.19 -51.93 -0.27 0.59 16 25 H 0.08 1.17 8.10 -51.93 -0.42 0.75 16 26 H 0.05 1.28 7.53 -51.93 -0.39 0.89 16 27 H 0.04 0.93 8.07 -51.93 -0.42 0.51 16 28 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 29 H 0.18 1.93 4.06 -52.48 -0.21 1.71 16 30 H 0.39 2.09 9.06 45.56 0.41 2.51 16 31 H 0.16 2.25 7.78 -52.49 -0.41 1.84 16 LS Contribution 283.68 15.07 4.27 4.27 Total: -1.00 -32.51 283.68 -4.36 -36.87 By element: Atomic # 1 Polarization: 0.38 SS G_CDS: -1.62 Total: -1.24 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: -2.11 Total: 1.80 kcal Atomic # 7 Polarization: -37.60 SS G_CDS: 0.21 Total: -37.39 kcal Atomic # 8 Polarization: -17.54 SS G_CDS: -0.17 Total: -17.71 kcal Atomic # 9 Polarization: -3.00 SS G_CDS: 0.08 Total: -2.92 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.02 Total: 16.32 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -32.51 -4.36 -36.87 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000183478887.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.532 kcal (2) G-P(sol) polarization free energy of solvation -32.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.865 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds