Wall clock time and date at job start Mon Mar 30 2020 01:30:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.46894 * 111.00285 * 2 1 4 4 C 1.53006 * 109.47242 * 66.04395 * 3 2 1 5 5 C 1.50703 * 109.47232 * 179.97438 * 4 3 2 6 6 H 1.08002 * 119.99547 * 0.02562 * 5 4 3 7 7 C 1.37873 * 120.00058 * 179.97438 * 5 4 3 8 8 N 1.31516 * 119.99811 * 0.02562 * 7 5 4 9 9 Si 1.86794 * 120.00265 * 180.02562 * 7 5 4 10 10 H 1.48501 * 109.46809 * 60.00090 * 9 7 5 11 11 H 1.48500 * 109.47582 * 180.02562 * 9 7 5 12 12 H 1.48507 * 109.47340 * 300.00782 * 9 7 5 13 13 C 1.46894 * 111.00068 * 236.04280 * 2 1 3 14 14 C 1.50698 * 109.47175 * 293.95825 * 13 2 1 15 15 C 1.38264 * 119.97083 * 270.01653 * 14 13 2 16 16 C 1.38194 * 120.05301 * 180.02562 * 15 14 13 17 17 C 1.38447 * 119.98582 * 359.95563 * 16 15 14 18 18 F 1.35098 * 120.03314 * 180.29640 * 17 16 15 19 19 C 1.38555 * 119.93778 * 0.02622 * 17 16 15 20 20 Cl 1.73602 * 120.02332 * 180.02562 * 19 17 16 21 21 C 1.38218 * 119.96823 * 90.00112 * 14 13 2 22 22 H 1.08998 * 109.47428 * 183.95665 * 1 2 3 23 23 H 1.09000 * 109.46986 * 303.95501 * 1 2 3 24 24 H 1.09003 * 109.46957 * 63.95186 * 1 2 3 25 25 H 1.09001 * 109.47327 * 186.04058 * 3 2 1 26 26 H 1.08998 * 109.47394 * 306.04527 * 3 2 1 27 27 H 1.08994 * 109.47509 * 300.00267 * 4 3 2 28 28 H 1.08998 * 109.47000 * 60.00302 * 4 3 2 29 29 H 0.97000 * 119.99966 * 179.97438 * 8 7 5 30 30 H 1.08999 * 109.47515 * 173.95208 * 13 2 1 31 31 H 1.09004 * 109.46810 * 53.95686 * 13 2 1 32 32 H 1.07999 * 119.97540 * 0.02562 * 15 14 13 33 33 H 1.08000 * 120.00964 * 180.02562 * 16 15 14 34 34 H 1.07992 * 119.99809 * 0.02562 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6315 2.0574 1.3183 5 6 2.1722 3.4641 1.3185 6 1 2.7202 3.8321 0.4637 7 6 1.9663 4.2816 2.4095 8 7 1.2985 3.8336 3.4502 9 14 2.6358 6.0255 2.4096 10 1 2.0445 6.7827 1.2772 11 1 2.2827 6.6913 3.6891 12 1 4.1131 5.9886 2.2625 13 6 1.9954 -0.7660 -1.1375 14 6 1.6368 -2.2204 -0.9727 15 6 2.4942 -3.0712 -0.2999 16 6 2.1673 -4.4054 -0.1483 17 6 0.9800 -4.8904 -0.6697 18 9 0.6567 -6.1932 -0.5168 19 6 0.1210 -4.0373 -1.3435 20 17 -1.3686 -4.6430 -1.9976 21 6 0.4510 -2.7025 -1.4941 22 1 -0.3634 -1.0252 0.0709 23 1 -0.3633 0.5740 0.8524 24 1 -0.3633 0.4513 -0.9233 25 1 3.0798 1.3443 -0.1081 26 1 1.5612 1.9273 -0.8309 27 1 0.5473 2.0845 1.4266 28 1 2.0658 1.5016 2.1492 29 1 1.1540 4.4086 4.2179 30 1 3.0797 -0.6611 -1.1756 31 1 1.5611 -0.3872 -2.0627 32 1 3.4201 -2.6930 0.1075 33 1 2.8373 -5.0693 0.3778 34 1 -0.2178 -2.0371 -2.0196 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258932480.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:12 Heat of formation + Delta-G solvation = -31.559491 kcal Electronic energy + Delta-G solvation = -17815.606017 eV Core-core repulsion = 14688.493529 eV Total energy + Delta-G solvation = -3127.112488 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -49.09940 -39.63393 -37.15377 -36.53687 -33.22143 -31.58522 -31.12639 -29.26376 -26.98227 -25.26400 -23.30427 -23.01717 -21.18598 -19.95331 -17.93105 -16.84454 -16.49639 -16.12798 -15.91613 -15.05373 -14.67890 -14.58350 -14.34474 -14.10949 -13.58777 -13.34117 -13.08895 -12.62118 -12.25517 -11.92650 -11.81734 -11.56214 -11.37911 -11.21049 -11.09144 -11.00997 -10.87454 -10.58531 -9.90348 -9.46359 -9.20030 -9.13858 -8.73253 -8.35183 -7.83024 -6.01649 -4.04549 0.80541 0.89822 1.81630 3.23740 3.31759 3.36635 3.38560 3.90778 4.36939 4.44449 4.54198 4.68728 4.90232 4.99694 5.24307 5.34180 5.54599 5.56575 5.69587 5.74380 5.79403 5.88612 5.92267 6.21197 6.30364 6.39716 6.47282 6.52141 6.90304 7.39680 7.45932 7.73958 7.85410 8.04646 8.39947 9.02496 9.59256 11.09597 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.038656 B = 0.003296 C = 0.003213 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 724.158004 B = 8494.285838 C = 8713.501632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.536 5.536 3 C 0.063 3.937 4 C 0.028 3.972 5 C -0.524 4.524 6 H 0.053 0.947 7 C 0.059 3.941 8 N -0.893 5.893 9 Si 0.892 3.108 10 H -0.277 1.277 11 H -0.287 1.287 12 H -0.277 1.277 13 C 0.089 3.911 14 C -0.063 4.063 15 C -0.064 4.064 16 C -0.142 4.142 17 C 0.101 3.899 18 F -0.131 7.131 19 C -0.074 4.074 20 Cl -0.057 7.057 21 C -0.078 4.078 22 H 0.058 0.942 23 H 0.081 0.919 24 H 0.019 0.981 25 H 0.062 0.938 26 H 0.022 0.978 27 H 0.018 0.982 28 H 0.025 0.975 29 H 0.261 0.739 30 H 0.086 0.914 31 H 0.042 0.958 32 H 0.143 0.857 33 H 0.144 0.856 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.542 -16.616 -10.512 19.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 N -0.260 5.260 3 C -0.064 4.064 4 C -0.009 4.009 5 C -0.563 4.563 6 H 0.072 0.928 7 C -0.142 4.142 8 N -0.532 5.532 9 Si 0.720 3.280 10 H -0.203 1.203 11 H -0.213 1.213 12 H -0.202 1.202 13 C -0.039 4.039 14 C -0.064 4.064 15 C -0.083 4.083 16 C -0.161 4.161 17 C 0.080 3.920 18 F -0.110 7.110 19 C -0.102 4.102 20 Cl -0.028 7.028 21 C -0.097 4.097 22 H 0.076 0.924 23 H 0.099 0.901 24 H 0.038 0.962 25 H 0.081 0.919 26 H 0.040 0.960 27 H 0.036 0.964 28 H 0.043 0.957 29 H 0.071 0.929 30 H 0.104 0.896 31 H 0.060 0.940 32 H 0.160 0.840 33 H 0.162 0.838 34 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.596 -16.877 -9.956 19.603 hybrid contribution -0.225 1.066 -0.650 1.269 sum -0.820 -15.810 -10.606 19.056 Atomic orbital electron populations 1.22481 0.87898 1.01188 1.01174 1.62142 1.07873 1.16062 1.39956 1.22387 0.98601 0.84722 1.00657 1.19100 0.96982 0.94019 0.90838 1.21145 1.35361 0.97806 1.01995 0.92836 1.24986 0.95250 0.98455 0.95552 1.69960 1.40624 1.36539 1.06035 0.86658 0.79445 0.84662 0.77215 1.20298 1.21268 1.20218 1.21094 1.01000 0.88513 0.93296 1.19933 0.93411 0.96470 0.96634 1.21072 1.00075 0.91540 0.95615 1.21143 0.95710 0.97167 1.02084 1.17407 0.95021 0.78495 1.01047 1.91521 1.92673 1.32945 1.93836 1.20930 0.90533 0.94593 1.04101 1.98380 1.31904 1.87929 1.84580 1.20924 0.96962 0.92372 0.99475 0.92366 0.90055 0.96245 0.91948 0.96014 0.96402 0.95680 0.92905 0.89551 0.94032 0.83957 0.83834 0.84235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.33 8.94 60.06 0.54 0.87 16 2 N -0.54 -9.07 4.75 -244.38 -1.16 -10.23 16 3 C 0.06 1.25 4.90 -3.82 -0.02 1.23 16 4 C 0.03 0.71 4.90 -27.88 -0.14 0.57 16 5 C -0.52 -14.54 9.11 -34.44 -0.31 -14.86 16 6 H 0.05 1.43 7.74 -52.49 -0.41 1.02 16 7 C 0.06 1.67 5.46 -17.82 -0.10 1.58 16 8 N -0.89 -26.55 13.29 55.43 0.74 -25.81 16 9 Si 0.89 21.33 29.54 -169.99 -5.02 16.31 16 10 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 11 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 12 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 13 C 0.09 1.16 5.12 -4.98 -0.03 1.13 16 14 C -0.06 -0.75 4.88 -104.62 -0.51 -1.26 16 15 C -0.06 -0.69 9.70 -39.59 -0.38 -1.08 16 16 C -0.14 -1.46 10.03 -39.52 -0.40 -1.86 16 17 C 0.10 1.18 7.28 -39.39 -0.29 0.89 16 18 F -0.13 -1.60 16.84 2.25 0.04 -1.56 16 19 C -0.07 -0.87 6.33 -39.43 -0.25 -1.12 16 20 Cl -0.06 -0.64 28.62 -51.86 -1.48 -2.13 16 21 C -0.08 -0.90 7.75 -39.56 -0.31 -1.20 16 22 H 0.06 0.84 6.17 -51.93 -0.32 0.52 16 23 H 0.08 1.50 6.30 -51.93 -0.33 1.17 16 24 H 0.02 0.29 8.14 -51.93 -0.42 -0.13 16 25 H 0.06 1.21 7.93 -51.93 -0.41 0.79 16 26 H 0.02 0.43 8.12 -51.93 -0.42 0.01 16 27 H 0.02 0.48 6.47 -51.93 -0.34 0.14 16 28 H 0.02 0.69 8.14 -51.93 -0.42 0.26 16 29 H 0.26 7.35 8.31 -40.82 -0.34 7.02 16 30 H 0.09 1.04 7.87 -51.93 -0.41 0.63 16 31 H 0.04 0.51 8.06 -51.93 -0.42 0.09 16 32 H 0.14 1.34 8.06 -52.49 -0.42 0.92 16 33 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 34 H 0.14 1.47 8.03 -52.49 -0.42 1.05 16 LS Contribution 306.15 15.07 4.61 4.61 Total: -1.00 -29.52 306.15 -8.77 -38.29 By element: Atomic # 1 Polarization: -0.08 SS G_CDS: -4.30 Total: -4.38 kcal Atomic # 6 Polarization: -12.92 SS G_CDS: -2.19 Total: -15.10 kcal Atomic # 7 Polarization: -35.61 SS G_CDS: -0.43 Total: -36.04 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 0.04 Total: -1.56 kcal Atomic # 14 Polarization: 21.33 SS G_CDS: -5.02 Total: 16.31 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.48 Total: -2.13 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -29.52 -8.77 -38.29 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258932480.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.727 kcal (2) G-P(sol) polarization free energy of solvation -29.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.794 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.287 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds