Wall clock time and date at job start Mon Mar 30 2020 01:19:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.08999 * 109.47357 * 2 1 4 4 C 1.50704 * 109.46706 * 240.00714 * 2 1 3 5 5 H 1.08005 * 119.99305 * 275.02449 * 4 2 1 6 6 C 1.37873 * 120.00482 * 95.02199 * 4 2 1 7 7 N 1.31511 * 120.00292 * 184.87128 * 6 4 2 8 8 Si 1.86799 * 119.99737 * 4.87745 * 6 4 2 9 9 H 1.48504 * 109.47238 * 84.74820 * 8 6 4 10 10 H 1.48504 * 109.47362 * 204.74846 * 8 6 4 11 11 H 1.48504 * 109.47263 * 324.75047 * 8 6 4 12 12 N 1.46893 * 109.47033 * 120.00907 * 2 1 3 13 13 C 1.46908 * 110.99755 * 176.04578 * 12 2 1 14 14 C 1.38486 * 110.99957 * 299.99278 * 12 2 1 15 15 C 1.41118 * 120.30241 * 299.98357 * 14 12 2 16 16 N 1.30346 * 120.41178 * 180.02562 * 15 14 12 17 17 N 1.39865 * 121.03556 * 359.75209 * 16 15 14 18 18 C 1.46501 * 119.72614 * 180.27886 * 17 16 15 19 19 C 1.34765 * 120.55554 * 0.51090 * 17 16 15 20 20 O 1.22156 * 120.20826 * 179.77367 * 19 17 16 21 21 C 1.38305 * 120.29860 * 120.00553 * 14 12 2 22 22 Cl 1.73598 * 120.49121 * 359.95429 * 21 14 12 23 23 H 1.08999 * 109.46987 * 175.30671 * 1 2 3 24 24 H 1.09000 * 109.46513 * 295.30942 * 1 2 3 25 25 H 1.08996 * 109.46868 * 55.30220 * 1 2 3 26 26 H 0.96996 * 119.99912 * 180.02562 * 7 6 4 27 27 H 1.09005 * 109.46936 * 183.95403 * 13 12 2 28 28 H 1.08997 * 109.46775 * 303.94586 * 13 12 2 29 29 H 1.08991 * 109.47365 * 63.94901 * 13 12 2 30 30 H 1.08003 * 119.78965 * 0.04375 * 15 14 12 31 31 H 1.08992 * 109.47414 * 270.22842 * 18 17 16 32 32 H 1.09001 * 109.46712 * 30.22536 * 18 17 16 33 33 H 1.08998 * 109.47269 * 150.22258 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7103 -1.2306 5 1 2.1350 -1.7854 -1.2293 6 6 2.3606 0.0123 -2.3580 7 7 2.7070 -0.6128 -3.4620 8 14 2.3135 1.8792 -2.3173 9 1 3.5980 2.3952 -1.7795 10 1 2.1083 2.3994 -3.6930 11 1 1.1968 2.3274 -1.4469 12 7 2.0197 -0.6927 1.1993 13 6 3.4852 -0.7947 1.1868 14 6 1.5758 -0.0648 2.3510 15 6 1.9169 1.2808 2.6051 16 7 1.5007 1.8737 3.6887 17 7 0.7055 1.1983 4.6203 18 6 0.2485 1.8944 5.8256 19 6 0.3601 -0.0890 4.4207 20 8 -0.3312 -0.6740 5.2405 21 6 0.7944 -0.7509 3.2629 22 17 0.3573 -2.4067 2.9784 23 1 -0.3633 -1.0242 -0.0841 24 1 -0.3632 0.4393 0.9291 25 1 -0.3633 0.5850 -0.8449 26 1 2.9384 -0.1044 -4.2550 27 1 3.8165 -1.3725 2.0497 28 1 3.8069 -1.2916 0.2717 29 1 3.9193 0.2041 1.2299 30 1 2.5265 1.8227 1.8972 31 1 0.9817 1.7628 6.6212 32 1 0.1331 2.9566 5.6099 33 1 -0.7094 1.4818 6.1423 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000267349010.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:19:55 Heat of formation + Delta-G solvation = 43.407924 kcal Electronic energy + Delta-G solvation = -19276.750631 eV Core-core repulsion = 16172.808935 eV Total energy + Delta-G solvation = -3103.941696 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.04522 -38.56311 -36.82426 -36.08997 -33.70363 -32.55407 -30.97801 -30.19533 -27.69671 -25.60342 -24.67180 -24.16386 -22.48549 -20.02046 -18.38921 -17.77760 -17.10386 -16.27551 -16.13497 -15.24889 -15.05940 -14.23613 -14.01706 -13.61742 -13.42089 -13.24416 -12.83509 -12.64129 -12.58964 -12.16074 -11.70814 -11.65012 -11.55716 -11.20339 -10.91712 -10.74138 -10.63439 -10.47632 -10.02711 -9.86318 -9.42797 -9.40007 -8.76952 -8.42411 -7.88059 -6.27073 -4.27557 0.31496 1.69845 1.89903 2.45201 3.09966 3.19661 3.22604 3.27467 3.97538 4.20954 4.22799 4.79544 5.00705 5.07485 5.15911 5.18702 5.47234 5.47731 5.79816 5.86415 5.94373 5.96540 6.17032 6.33914 6.41492 6.61717 6.75768 7.06406 7.33986 7.49430 7.54591 7.77251 7.81437 8.40393 8.84048 9.33339 10.84938 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.025155 B = 0.006889 C = 0.005980 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1112.829536 B = 4063.500332 C = 4681.115360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C 0.185 3.815 3 H 0.010 0.990 4 C -0.504 4.504 5 H 0.087 0.913 6 C 0.078 3.922 7 N -0.887 5.887 8 Si 0.865 3.135 9 H -0.273 1.273 10 H -0.285 1.285 11 H -0.265 1.265 12 N -0.499 5.499 13 C 0.041 3.959 14 C 0.156 3.844 15 C 0.062 3.938 16 N -0.217 5.217 17 N -0.417 5.417 18 C 0.099 3.901 19 C 0.512 3.488 20 O -0.532 6.532 21 C -0.106 4.106 22 Cl 0.002 6.998 23 H 0.061 0.939 24 H 0.016 0.984 25 H 0.052 0.948 26 H 0.267 0.733 27 H 0.053 0.947 28 H 0.104 0.896 29 H 0.022 0.978 30 H 0.195 0.805 31 H 0.071 0.929 32 H 0.088 0.912 33 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.880 5.356 12.964 14.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C 0.081 3.919 3 H 0.028 0.972 4 C -0.543 4.543 5 H 0.105 0.895 6 C -0.126 4.126 7 N -0.523 5.523 8 Si 0.692 3.308 9 H -0.199 1.199 10 H -0.211 1.211 11 H -0.190 1.190 12 N -0.222 5.222 13 C -0.104 4.104 14 C 0.053 3.947 15 C -0.139 4.139 16 N -0.031 5.031 17 N -0.237 5.237 18 C -0.042 4.042 19 C 0.307 3.693 20 O -0.410 6.410 21 C -0.145 4.145 22 Cl 0.031 6.969 23 H 0.081 0.919 24 H 0.035 0.965 25 H 0.071 0.929 26 H 0.077 0.923 27 H 0.072 0.928 28 H 0.122 0.878 29 H 0.041 0.959 30 H 0.212 0.788 31 H 0.090 0.910 32 H 0.106 0.894 33 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.469 5.249 13.738 14.780 hybrid contribution 0.256 1.005 -0.645 1.221 sum -1.213 6.254 13.093 14.561 Atomic orbital electron populations 1.21991 0.97259 1.01832 0.98248 1.19933 0.92678 0.92082 0.87173 0.97246 1.20771 1.43851 0.96122 0.93528 0.89498 1.24972 0.94367 0.97955 0.95343 1.69863 1.44903 1.35889 1.01675 0.87044 0.79089 0.86753 0.77896 1.19912 1.21054 1.18953 1.59705 1.11770 1.51288 0.99438 1.22312 0.84308 0.99898 1.03896 1.20118 0.91776 0.90051 0.92736 1.24774 0.99595 0.94844 0.94724 1.75102 1.04247 1.23427 1.00285 1.49541 1.43996 1.10100 1.20075 1.21818 1.01131 0.97919 0.83365 1.16933 0.82895 0.81891 0.87611 1.91006 1.39092 1.64483 1.46383 1.22387 1.04561 0.91108 0.96441 1.98371 1.90957 1.12247 1.95284 0.91945 0.96527 0.92863 0.92262 0.92820 0.87782 0.95950 0.78830 0.91034 0.89378 0.88840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.75 9.14 37.16 0.34 -2.41 16 2 C 0.18 3.87 1.50 -68.86 -0.10 3.76 16 3 H 0.01 0.20 4.28 -51.93 -0.22 -0.02 16 4 C -0.50 -12.54 7.39 -34.44 -0.25 -12.79 16 5 H 0.09 2.42 8.05 -52.48 -0.42 2.00 16 6 C 0.08 2.00 5.47 -17.82 -0.10 1.91 16 7 N -0.89 -24.80 13.96 55.43 0.77 -24.03 16 8 Si 0.87 19.20 26.99 -169.99 -4.59 14.61 16 9 H -0.27 -5.86 7.11 56.52 0.40 -5.46 16 10 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 11 H -0.26 -5.62 6.82 56.52 0.39 -5.24 16 12 N -0.50 -9.31 4.01 -172.52 -0.69 -10.00 16 13 C 0.04 0.70 9.11 60.07 0.55 1.24 16 14 C 0.16 2.65 3.21 -83.74 -0.27 2.38 16 15 C 0.06 0.92 9.86 -17.09 -0.17 0.75 16 16 N -0.22 -3.12 11.53 30.81 0.36 -2.76 16 17 N -0.42 -6.10 3.91 -70.38 -0.27 -6.38 16 18 C 0.10 1.03 10.72 59.85 0.64 1.67 16 19 C 0.51 8.79 7.48 -15.50 -0.12 8.68 16 20 O -0.53 -10.06 16.19 4.78 0.08 -9.98 16 21 C -0.11 -1.85 6.39 -38.80 -0.25 -2.10 16 22 Cl 0.00 0.04 28.08 -51.86 -1.46 -1.42 16 23 H 0.06 1.31 8.14 -51.93 -0.42 0.88 16 24 H 0.02 0.30 7.06 -51.93 -0.37 -0.06 16 25 H 0.05 1.09 8.14 -51.93 -0.42 0.66 16 26 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 27 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 28 H 0.10 1.96 6.82 -51.93 -0.35 1.61 16 29 H 0.02 0.34 7.35 -51.93 -0.38 -0.05 16 30 H 0.20 2.53 7.06 -52.48 -0.37 2.16 16 31 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 32 H 0.09 0.73 8.14 -51.93 -0.42 0.31 16 33 H 0.09 0.97 7.41 -51.93 -0.38 0.59 16 LS Contribution 293.02 15.07 4.42 4.42 Total: -1.00 -28.91 293.02 -4.88 -33.79 By element: Atomic # 1 Polarization: 2.42 SS G_CDS: -3.77 Total: -1.35 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: 0.27 Total: 3.09 kcal Atomic # 7 Polarization: -43.33 SS G_CDS: 0.16 Total: -43.17 kcal Atomic # 8 Polarization: -10.06 SS G_CDS: 0.08 Total: -9.98 kcal Atomic # 14 Polarization: 19.20 SS G_CDS: -4.59 Total: 14.61 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -1.46 Total: -1.42 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -28.91 -4.88 -33.79 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000267349010.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.201 kcal (2) G-P(sol) polarization free energy of solvation -28.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.793 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds