Wall clock time and date at job start Mon Mar 30 2020 01:19:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.08997 * 109.46967 * 2 1 4 4 C 1.50703 * 109.47001 * 120.00121 * 2 1 3 5 5 H 1.07998 * 120.00040 * 120.00628 * 4 2 1 6 6 C 1.37880 * 119.99831 * 299.99852 * 4 2 1 7 7 N 1.31516 * 120.00035 * 0.02562 * 6 4 2 8 8 Si 1.86798 * 119.99854 * 180.02562 * 6 4 2 9 9 H 1.48504 * 109.47318 * 89.99723 * 8 6 4 10 10 H 1.48493 * 109.47401 * 210.00001 * 8 6 4 11 11 H 1.48506 * 109.47208 * 330.00082 * 8 6 4 12 12 N 1.46897 * 109.47094 * 240.00030 * 2 1 3 13 13 C 1.46904 * 111.00043 * 183.95296 * 12 2 1 14 14 C 1.38476 * 111.00007 * 59.99877 * 12 2 1 15 15 C 1.41118 * 120.30123 * 60.22122 * 14 12 2 16 16 N 1.30363 * 120.41302 * 180.28712 * 15 14 12 17 17 N 1.39871 * 121.02970 * 359.74235 * 16 15 14 18 18 C 1.46492 * 119.71875 * 179.97438 * 17 16 15 19 19 C 1.34760 * 120.55995 * 0.02562 * 17 16 15 20 20 O 1.22150 * 120.21020 * 179.97438 * 19 17 16 21 21 C 1.38307 * 120.30068 * 239.99727 * 14 12 2 22 22 Cl 1.73599 * 120.49265 * 0.02562 * 21 14 12 23 23 H 1.09007 * 109.46919 * 180.02562 * 1 2 3 24 24 H 1.08999 * 109.46851 * 299.99389 * 1 2 3 25 25 H 1.08993 * 109.47193 * 59.99900 * 1 2 3 26 26 H 0.96998 * 119.99492 * 179.97438 * 7 6 4 27 27 H 1.08998 * 109.46987 * 296.04794 * 13 12 2 28 28 H 1.09000 * 109.47122 * 56.04567 * 13 12 2 29 29 H 1.08993 * 109.47035 * 176.04877 * 13 12 2 30 30 H 1.08000 * 119.79832 * 0.02562 * 15 14 12 31 31 H 1.08996 * 109.47793 * 270.02852 * 18 17 16 32 32 H 1.09009 * 109.47140 * 30.02656 * 18 17 16 33 33 H 1.09004 * 109.47200 * 150.01943 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0324 -0.7105 1.2305 5 1 2.6533 -1.5885 1.1314 6 6 1.6993 -0.2394 2.4828 7 7 0.9428 0.8297 2.6034 8 14 2.3225 -1.1196 4.0080 9 1 3.6305 -0.5441 4.4119 10 1 1.3445 -0.9490 5.1123 11 1 2.4880 -2.5654 3.7122 12 7 2.0197 -0.6925 -1.1994 13 6 3.4851 -0.7945 -1.1870 14 6 1.5757 -0.0646 -2.3510 15 6 1.9203 1.2797 -2.6070 16 7 1.4988 1.8747 -3.6877 17 7 0.7033 1.1993 -4.6191 18 6 0.2451 1.8960 -5.8235 19 6 0.3540 -0.0865 -4.4173 20 8 -0.3413 -0.6700 -5.2346 21 6 0.7943 -0.7506 -3.2629 22 17 0.3577 -2.4067 -2.9789 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 0.5138 -0.8899 26 1 0.7082 1.1608 3.4844 27 1 3.9192 0.2044 -1.2300 28 1 3.8070 -1.2915 -0.2719 29 1 3.8164 -1.3720 -2.0500 30 1 2.5335 1.8204 -1.9013 31 1 -0.7127 2.3761 -5.6235 32 1 0.9779 2.6515 -6.1073 33 1 0.1295 1.1788 -6.6363 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000267349011.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:19:57 Heat of formation + Delta-G solvation = 43.732060 kcal Electronic energy + Delta-G solvation = -19195.951884 eV Core-core repulsion = 16092.024244 eV Total energy + Delta-G solvation = -3103.927640 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.93466 -38.42736 -36.71739 -35.99340 -33.70377 -32.59863 -30.76550 -29.42509 -27.64060 -25.54313 -24.52718 -24.05126 -22.46499 -20.13590 -18.28922 -17.65712 -16.42209 -16.19478 -16.02808 -15.27579 -14.87861 -14.12265 -14.02687 -13.53304 -13.32512 -13.24613 -12.66614 -12.58116 -12.31750 -11.90105 -11.64030 -11.46235 -11.20110 -11.04412 -10.86425 -10.53160 -10.38136 -10.33322 -10.17867 -9.83172 -9.27481 -9.17305 -8.59797 -8.31987 -7.73828 -6.17441 -4.23407 0.43079 1.81603 1.99725 2.54926 3.22477 3.30614 3.33714 3.38352 4.07392 4.27313 4.42244 4.94103 5.12380 5.16397 5.23897 5.27172 5.54813 5.57924 5.86851 5.92333 6.00715 6.12284 6.49717 6.60594 6.83323 6.86508 7.17960 7.47305 7.60057 7.63955 7.81714 7.90367 8.06858 8.29254 8.80389 9.42415 10.89348 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.028425 B = 0.005970 C = 0.005527 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 984.798904 B = 4688.725557 C = 5064.794821 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C 0.218 3.782 3 H 0.011 0.989 4 C -0.509 4.509 5 H 0.069 0.931 6 C 0.063 3.937 7 N -0.890 5.890 8 Si 0.900 3.100 9 H -0.280 1.280 10 H -0.286 1.286 11 H -0.272 1.272 12 N -0.505 5.505 13 C 0.039 3.961 14 C 0.164 3.836 15 C 0.067 3.933 16 N -0.219 5.219 17 N -0.417 5.417 18 C 0.099 3.901 19 C 0.512 3.488 20 O -0.534 6.534 21 C -0.107 4.107 22 Cl -0.001 7.001 23 H 0.041 0.959 24 H 0.091 0.909 25 H 0.000 1.000 26 H 0.263 0.737 27 H 0.024 0.976 28 H 0.095 0.905 29 H 0.051 0.949 30 H 0.198 0.802 31 H 0.071 0.929 32 H 0.087 0.913 33 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.573 1.992 -10.629 11.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C 0.115 3.885 3 H 0.028 0.972 4 C -0.547 4.547 5 H 0.087 0.913 6 C -0.139 4.139 7 N -0.528 5.528 8 Si 0.728 3.272 9 H -0.207 1.207 10 H -0.212 1.212 11 H -0.197 1.197 12 N -0.228 5.228 13 C -0.107 4.107 14 C 0.061 3.939 15 C -0.135 4.135 16 N -0.032 5.032 17 N -0.237 5.237 18 C -0.042 4.042 19 C 0.307 3.693 20 O -0.413 6.413 21 C -0.147 4.147 22 Cl 0.028 6.972 23 H 0.060 0.940 24 H 0.110 0.890 25 H 0.019 0.981 26 H 0.073 0.927 27 H 0.043 0.957 28 H 0.114 0.886 29 H 0.070 0.930 30 H 0.214 0.786 31 H 0.090 0.910 32 H 0.106 0.894 33 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 1.832 1.986 -11.464 11.778 hybrid contribution 0.414 -0.427 1.399 1.520 sum 2.246 1.559 -10.066 10.430 Atomic orbital electron populations 1.21850 0.97122 1.00353 0.99941 1.19480 0.92758 0.92077 0.84147 0.97186 1.21030 1.31831 1.12754 0.89117 0.91327 1.24910 0.94910 0.94997 0.99105 1.69875 1.36251 1.22850 1.23860 0.86456 0.78458 0.80109 0.82188 1.20656 1.21206 1.19706 1.59662 1.11103 1.51795 1.00266 1.22324 0.85150 0.99953 1.03223 1.20066 0.91454 0.89971 0.92398 1.24812 0.99323 0.94698 0.94642 1.75120 1.04343 1.23220 1.00549 1.49528 1.43959 1.10166 1.20086 1.21804 1.00373 0.97889 0.84145 1.16925 0.82920 0.81833 0.87605 1.90995 1.39045 1.64884 1.46328 1.22376 1.04627 0.91016 0.96647 1.98361 1.91067 1.12415 1.95337 0.93966 0.89035 0.98077 0.92684 0.95700 0.88631 0.93032 0.78563 0.91049 0.89415 0.88937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -3.13 8.84 37.16 0.33 -2.80 16 2 C 0.22 4.91 1.84 -68.86 -0.13 4.78 16 3 H 0.01 0.25 7.14 -51.93 -0.37 -0.12 16 4 C -0.51 -12.56 7.88 -34.44 -0.27 -12.83 16 5 H 0.07 1.68 6.41 -52.49 -0.34 1.34 16 6 C 0.06 1.60 5.30 -17.82 -0.09 1.51 16 7 N -0.89 -23.57 11.32 55.43 0.63 -22.95 16 8 Si 0.90 19.96 29.54 -169.99 -5.02 14.94 16 9 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 10 H -0.29 -6.42 7.11 56.52 0.40 -6.02 16 11 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 12 N -0.51 -9.77 4.01 -172.53 -0.69 -10.46 16 13 C 0.04 0.65 9.10 60.07 0.55 1.20 16 14 C 0.16 2.93 3.28 -83.74 -0.28 2.65 16 15 C 0.07 1.04 9.86 -17.08 -0.17 0.88 16 16 N -0.22 -3.32 11.53 30.81 0.36 -2.96 16 17 N -0.42 -6.45 3.91 -70.38 -0.27 -6.73 16 18 C 0.10 1.10 10.72 59.84 0.64 1.74 16 19 C 0.51 9.26 7.48 -15.50 -0.12 9.14 16 20 O -0.53 -10.54 16.19 4.78 0.08 -10.47 16 21 C -0.11 -1.99 6.39 -38.79 -0.25 -2.23 16 22 Cl 0.00 -0.02 28.08 -51.86 -1.46 -1.48 16 23 H 0.04 1.00 8.14 -51.92 -0.42 0.58 16 24 H 0.09 2.33 6.07 -51.93 -0.32 2.02 16 25 H 0.00 0.00 7.22 -51.93 -0.38 -0.37 16 26 H 0.26 6.71 8.31 -40.82 -0.34 6.37 16 27 H 0.02 0.37 7.33 -51.93 -0.38 -0.01 16 28 H 0.10 1.68 6.10 -51.93 -0.32 1.37 16 29 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 30 H 0.20 2.72 7.06 -52.49 -0.37 2.35 16 31 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 32 H 0.09 0.76 8.14 -51.92 -0.42 0.34 16 33 H 0.09 1.00 7.41 -51.93 -0.38 0.62 16 LS Contribution 292.22 15.07 4.40 4.40 Total: -1.00 -28.49 292.22 -5.44 -33.93 By element: Atomic # 1 Polarization: 1.41 SS G_CDS: -3.68 Total: -2.27 kcal Atomic # 6 Polarization: 3.82 SS G_CDS: 0.22 Total: 4.04 kcal Atomic # 7 Polarization: -43.11 SS G_CDS: 0.02 Total: -43.09 kcal Atomic # 8 Polarization: -10.54 SS G_CDS: 0.08 Total: -10.47 kcal Atomic # 14 Polarization: 19.96 SS G_CDS: -5.02 Total: 14.94 kcal Atomic # 17 Polarization: -0.02 SS G_CDS: -1.46 Total: -1.48 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -28.49 -5.44 -33.93 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000267349011.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.658 kcal (2) G-P(sol) polarization free energy of solvation -28.486 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.926 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds