Wall clock time and date at job start Mon Mar 30 2020 01:04:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.50697 * 109.47299 * 2 1 4 4 N 1.30412 * 125.97242 * 269.99827 * 3 2 1 5 5 N 1.39913 * 108.97754 * 180.02562 * 4 3 2 6 6 C 1.46504 * 125.74646 * 179.97438 * 5 4 3 7 7 C 1.34378 * 108.51010 * 359.97438 * 5 4 3 8 8 Cl 1.73599 * 126.32728 * 179.97438 * 7 5 4 9 9 C 1.38339 * 107.34338 * 0.02562 * 7 5 4 10 10 C 1.47236 * 126.44160 * 179.73342 * 9 7 5 11 11 O 1.21645 * 119.99418 * 90.02142 * 10 9 7 12 12 N 1.34776 * 120.00163 * 270.02504 * 10 9 7 13 13 C 1.46502 * 119.99983 * 0.02562 * 12 10 9 14 14 C 1.36992 * 120.00025 * 179.97438 * 12 10 9 15 15 H 1.08001 * 119.99747 * 22.46273 * 14 12 10 16 16 C 1.38966 * 119.99779 * 202.46089 * 14 12 10 17 17 N 1.31417 * 120.00066 * 11.57685 * 16 14 12 18 18 Si 1.86801 * 119.99823 * 191.57115 * 16 14 12 19 19 H 1.48508 * 109.46843 * 0.02562 * 18 16 14 20 20 H 1.48499 * 109.47043 * 119.99982 * 18 16 14 21 21 H 1.48498 * 109.47085 * 240.00293 * 18 16 14 22 22 H 1.09007 * 109.47282 * 300.00734 * 1 2 3 23 23 H 1.09001 * 109.47050 * 59.99934 * 1 2 3 24 24 H 1.08997 * 109.47343 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46825 * 239.99437 * 2 1 3 26 26 H 1.09002 * 109.46500 * 119.99539 * 2 1 3 27 27 H 1.08994 * 109.47036 * 269.99545 * 6 5 4 28 28 H 1.08997 * 109.47346 * 29.99730 * 6 5 4 29 29 H 1.09004 * 109.47001 * 150.00097 * 6 5 4 30 30 H 1.09001 * 109.47092 * 92.21291 * 13 12 10 31 31 H 1.08994 * 109.46895 * 212.21616 * 13 12 10 32 32 H 1.09006 * 109.46985 * 332.21677 * 13 12 10 33 33 H 0.97003 * 119.99428 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 7 2.2878 2.1430 -1.0554 5 7 2.7344 3.4043 -0.6465 6 6 3.1238 4.5034 -1.5334 7 6 2.7460 3.4379 0.6968 8 17 3.2222 4.7813 1.6879 9 6 2.3094 2.2037 1.1440 10 6 2.1661 1.7826 2.5475 11 8 1.1140 1.9610 3.1316 12 7 3.2004 1.1995 3.1852 13 6 4.4676 0.9852 2.4819 14 6 3.0672 0.8082 4.4913 15 1 2.0857 0.6223 4.9018 16 6 4.1950 0.6505 5.2878 17 7 5.3611 1.0893 4.8700 18 14 4.0532 -0.1852 6.9524 19 1 2.6424 -0.5853 7.1869 20 1 4.9197 -1.3910 6.9764 21 1 4.4848 0.7558 8.0170 22 1 -0.3634 0.5140 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 1.8933 -0.5139 -0.8900 26 1 1.8932 -0.5138 0.8901 27 1 4.1890 4.4329 -1.7531 28 1 2.5563 4.4395 -2.4619 29 1 2.9157 5.4554 -1.0451 30 1 5.1256 1.8377 2.6508 31 1 4.9430 0.0792 2.8578 32 1 4.2770 0.8793 1.4139 33 1 6.1483 0.9788 5.4259 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271209252.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:04:05 Heat of formation + Delta-G solvation = 42.194987 kcal Electronic energy + Delta-G solvation = -19203.322751 eV Core-core repulsion = 16099.328458 eV Total energy + Delta-G solvation = -3103.994293 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.06881 -37.96135 -36.60384 -34.61222 -34.39065 -31.74281 -31.41008 -29.66479 -26.92178 -26.08825 -24.51695 -23.32807 -21.66988 -19.87371 -18.84166 -17.05831 -16.66641 -15.82069 -15.40790 -14.82300 -14.64510 -14.11523 -13.98012 -13.52496 -13.11507 -12.92740 -12.89282 -12.37730 -12.25613 -11.57622 -11.45066 -11.41247 -11.29700 -11.23732 -11.14254 -10.88714 -10.84237 -10.29699 -10.28370 -10.18811 -9.00559 -8.96265 -8.55924 -8.01734 -7.62148 -6.26905 -3.82695 1.68797 1.81830 2.77142 2.81533 3.17537 3.28530 3.35778 3.82180 4.18602 4.50739 4.95076 5.09916 5.11049 5.17499 5.27288 5.33482 5.62231 5.73455 5.74828 5.88462 6.08295 6.16928 6.34368 6.46103 6.55033 6.73518 6.85466 6.97158 7.30701 7.61072 7.77820 8.18772 8.54439 9.22997 9.47344 10.05819 10.76565 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020581 B = 0.007150 C = 0.006012 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1360.125764 B = 3915.071688 C = 4656.474002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.043 4.043 3 C 0.112 3.888 4 N -0.283 5.283 5 N -0.366 5.366 6 C 0.099 3.901 7 C 0.140 3.860 8 Cl 0.006 6.994 9 C -0.206 4.206 10 C 0.518 3.482 11 O -0.580 6.580 12 N -0.431 5.431 13 C 0.118 3.882 14 C -0.303 4.303 15 H 0.101 0.899 16 C 0.031 3.969 17 N -0.880 5.880 18 Si 0.925 3.075 19 H -0.267 1.267 20 H -0.281 1.281 21 H -0.282 1.282 22 H 0.066 0.934 23 H 0.052 0.948 24 H 0.061 0.939 25 H 0.079 0.921 26 H 0.089 0.911 27 H 0.078 0.922 28 H 0.093 0.907 29 H 0.086 0.914 30 H 0.056 0.944 31 H 0.068 0.932 32 H 0.023 0.977 33 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.971 3.080 -11.474 11.920 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.082 4.082 3 C -0.055 4.055 4 N -0.106 5.106 5 N -0.150 5.150 6 C -0.042 4.042 7 C -0.014 4.014 8 Cl 0.034 6.966 9 C -0.222 4.222 10 C 0.304 3.696 11 O -0.465 6.465 12 N -0.148 5.148 13 C -0.026 4.026 14 C -0.431 4.431 15 H 0.119 0.881 16 C -0.172 4.172 17 N -0.519 5.519 18 Si 0.752 3.248 19 H -0.191 1.191 20 H -0.207 1.207 21 H -0.208 1.208 22 H 0.085 0.915 23 H 0.071 0.929 24 H 0.080 0.920 25 H 0.097 0.903 26 H 0.107 0.893 27 H 0.096 0.904 28 H 0.111 0.889 29 H 0.105 0.895 30 H 0.074 0.926 31 H 0.087 0.913 32 H 0.042 0.958 33 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -1.153 3.444 -12.353 12.876 hybrid contribution 0.465 0.090 1.636 1.703 sum -0.688 3.534 -10.717 11.305 Atomic orbital electron populations 1.21696 0.93929 1.01910 1.02677 1.20006 0.96569 0.88000 1.03645 1.22299 0.97333 0.96957 0.88881 1.77084 1.22055 0.89612 1.21869 1.48188 1.52143 1.12002 1.02645 1.21903 1.01660 0.86330 0.94340 1.21924 1.03792 0.92110 0.83594 1.98410 1.89926 1.42389 1.65894 1.20234 1.12639 0.92659 0.96677 1.16849 0.85858 0.82866 0.84027 1.90614 1.28629 1.59647 1.67579 1.43477 1.10442 1.49854 1.11075 1.21424 0.86494 1.02847 0.91786 1.19714 0.94943 1.42557 0.85907 0.88134 1.25348 0.95121 0.97238 0.99528 1.70036 0.99572 1.44019 1.38285 0.85872 0.78658 0.78727 0.81518 1.19142 1.20708 1.20801 0.91454 0.92860 0.91995 0.90279 0.89290 0.90357 0.88871 0.89502 0.92572 0.91333 0.95846 0.92364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.12 9.89 37.16 0.37 -1.75 16 2 C -0.04 -0.69 6.33 -27.88 -0.18 -0.86 16 3 C 0.11 2.10 6.20 -82.01 -0.51 1.59 16 4 N -0.28 -4.99 12.49 33.90 0.42 -4.56 16 5 N -0.37 -5.97 3.98 -64.29 -0.26 -6.23 16 6 C 0.10 1.05 11.28 59.85 0.68 1.72 16 7 C 0.14 2.68 7.54 -16.40 -0.12 2.56 16 8 Cl 0.01 0.10 28.57 -51.86 -1.48 -1.38 16 9 C -0.21 -4.45 4.08 -105.02 -0.43 -4.88 16 10 C 0.52 13.25 7.01 -12.61 -0.09 13.17 16 11 O -0.58 -16.75 16.80 5.24 0.09 -16.66 16 12 N -0.43 -11.31 3.02 -123.48 -0.37 -11.68 16 13 C 0.12 2.79 8.54 59.85 0.51 3.30 16 14 C -0.30 -8.48 9.29 -14.98 -0.14 -8.62 16 15 H 0.10 2.93 7.40 -52.49 -0.39 2.54 16 16 C 0.03 0.82 5.11 -17.46 -0.09 0.73 16 17 N -0.88 -23.51 10.61 55.50 0.59 -22.93 16 18 Si 0.93 20.74 29.57 -169.99 -5.03 15.71 16 19 H -0.27 -5.98 7.11 56.52 0.40 -5.57 16 20 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 21 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 22 H 0.07 1.16 8.14 -51.93 -0.42 0.74 16 23 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 24 H 0.06 0.76 8.14 -51.93 -0.42 0.33 16 25 H 0.08 1.07 8.14 -51.93 -0.42 0.65 16 26 H 0.09 1.53 8.00 -51.93 -0.42 1.11 16 27 H 0.08 0.71 8.14 -51.93 -0.42 0.28 16 28 H 0.09 0.82 8.14 -51.93 -0.42 0.39 16 29 H 0.09 0.79 7.78 -51.93 -0.40 0.39 16 30 H 0.06 1.39 7.53 -51.93 -0.39 0.99 16 31 H 0.07 1.66 7.07 -51.93 -0.37 1.29 16 32 H 0.02 0.49 6.55 -51.93 -0.34 0.15 16 33 H 0.27 6.72 8.31 -40.82 -0.34 6.38 16 LS Contribution 303.11 15.07 4.57 4.57 Total: -1.00 -32.42 303.11 -5.45 -37.86 By element: Atomic # 1 Polarization: 2.31 SS G_CDS: -3.98 Total: -1.67 kcal Atomic # 6 Polarization: 6.96 SS G_CDS: 0.00 Total: 6.96 kcal Atomic # 7 Polarization: -45.78 SS G_CDS: 0.38 Total: -45.40 kcal Atomic # 8 Polarization: -16.75 SS G_CDS: 0.09 Total: -16.66 kcal Atomic # 14 Polarization: 20.74 SS G_CDS: -5.03 Total: 15.71 kcal Atomic # 17 Polarization: 0.10 SS G_CDS: -1.48 Total: -1.38 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -32.42 -5.45 -37.86 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271209252.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.056 kcal (2) G-P(sol) polarization free energy of solvation -32.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.640 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.445 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.861 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds