Wall clock time and date at job start Mon Mar 30 2020 01:09:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52998 * 109.47265 * 2 1 4 4 H 1.08995 * 109.47539 * 302.84983 * 3 2 1 5 5 C 1.50707 * 109.47342 * 182.84735 * 3 2 1 6 6 H 1.07994 * 120.00478 * 245.68444 * 5 3 2 7 7 C 1.37881 * 119.99427 * 65.68226 * 5 3 2 8 8 N 1.31513 * 119.99653 * 193.19810 * 7 5 3 9 9 Si 1.86807 * 120.00170 * 13.19416 * 7 5 3 10 10 H 1.48496 * 109.46696 * 86.01810 * 9 7 5 11 11 H 1.48494 * 109.47110 * 206.01747 * 9 7 5 12 12 H 1.48495 * 109.46998 * 326.01937 * 9 7 5 13 13 N 1.46505 * 109.47007 * 62.85354 * 3 2 1 14 14 C 1.38481 * 119.99646 * 208.56059 * 13 3 2 15 15 C 1.41113 * 120.30325 * 354.51142 * 14 13 3 16 16 N 1.30360 * 120.41149 * 180.02562 * 15 14 13 17 17 N 1.39871 * 121.02933 * 359.77032 * 16 15 14 18 18 C 1.46507 * 119.71704 * 180.26266 * 17 16 15 19 19 C 1.34760 * 120.56100 * 0.51531 * 17 16 15 20 20 O 1.22151 * 120.20830 * 179.74653 * 19 17 16 21 21 C 1.38309 * 120.29522 * 174.53531 * 14 13 3 22 22 Cl 1.73600 * 120.49341 * 359.97438 * 21 14 13 23 23 H 1.08998 * 109.47394 * 304.92526 * 1 2 3 24 24 H 1.09002 * 109.47014 * 64.91869 * 1 2 3 25 25 H 1.08997 * 109.47563 * 184.91642 * 1 2 3 26 26 H 1.09001 * 109.47121 * 240.00472 * 2 1 3 27 27 H 1.09002 * 109.47060 * 119.99977 * 2 1 3 28 28 H 0.97000 * 119.99798 * 179.97438 * 8 7 5 29 29 H 0.96998 * 120.00098 * 28.55963 * 13 3 2 30 30 H 1.07995 * 119.79701 * 0.02562 * 15 14 13 31 31 H 1.09004 * 109.46905 * 270.24873 * 18 17 16 32 32 H 1.08998 * 109.46936 * 30.25194 * 18 17 16 33 33 H 1.08998 * 109.46576 * 150.25176 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6356 1.9709 -0.8633 5 6 3.5454 1.4431 -0.0706 6 1 4.1249 1.8142 0.7617 7 6 4.1828 0.9697 -1.1979 8 7 5.4747 0.7255 -1.1690 9 14 3.2112 0.6751 -2.7660 10 1 3.1296 1.9383 -3.5423 11 1 3.8902 -0.3639 -3.5811 12 1 1.8416 0.2168 -2.4209 13 7 1.6086 2.1130 1.2291 14 6 1.4058 3.4828 1.2359 15 6 1.7227 4.2552 0.0982 16 7 1.5331 5.5449 0.1025 17 7 1.0094 6.1930 1.2259 18 6 0.8027 7.6431 1.1973 19 6 0.6981 5.4955 2.3362 20 8 0.2454 6.0687 3.3153 21 6 0.8912 4.1064 2.3581 22 17 0.4915 3.1837 3.7732 23 1 -0.3634 0.5883 0.8425 24 1 -0.3633 0.4356 -0.9308 25 1 -0.3634 -1.0238 0.0881 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 5.9231 0.3921 -1.9620 29 1 1.4650 1.5974 2.0381 30 1 2.1248 3.7748 -0.7815 31 1 1.7045 8.1456 1.5472 32 1 0.5834 7.9587 0.1773 33 1 -0.0335 7.9037 1.8461 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273880167.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:09:59 Heat of formation + Delta-G solvation = 22.562939 kcal Electronic energy + Delta-G solvation = -18950.924477 eV Core-core repulsion = 15846.078875 eV Total energy + Delta-G solvation = -3104.845602 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.55639 -37.99401 -36.53938 -35.95065 -34.00706 -32.48582 -31.84654 -29.96440 -27.73069 -26.68206 -24.04458 -23.22674 -22.13364 -20.59995 -17.92856 -17.57090 -17.15677 -16.86526 -15.81821 -15.22625 -15.13950 -14.41615 -13.96510 -13.67870 -13.34099 -13.14120 -12.95693 -12.66912 -12.43073 -12.20239 -12.13643 -11.74692 -11.40479 -11.09763 -11.00101 -10.95915 -10.52957 -10.46998 -10.21368 -9.76148 -9.57203 -9.47536 -8.80075 -8.48045 -7.33542 -6.41670 -4.44493 0.84868 2.21485 2.27183 2.74139 3.03769 3.10480 3.17789 3.65530 3.74697 4.09970 4.50545 4.84068 5.02636 5.15032 5.44436 5.47682 5.60747 5.63658 5.72262 5.78892 5.92748 6.09198 6.16632 6.27672 6.34597 6.38067 6.61472 6.81559 7.23666 7.37009 7.78633 7.95259 8.15015 8.29058 8.66373 9.17382 10.70250 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020838 B = 0.006738 C = 0.005798 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1343.370047 B = 4154.330189 C = 4828.258625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.138 4.138 3 C 0.234 3.766 4 H 0.042 0.958 5 C -0.552 4.552 6 H 0.082 0.918 7 C 0.086 3.914 8 N -0.876 5.876 9 Si 0.852 3.148 10 H -0.271 1.271 11 H -0.283 1.283 12 H -0.247 1.247 13 N -0.663 5.663 14 C 0.276 3.724 15 C 0.086 3.914 16 N -0.204 5.204 17 N -0.435 5.435 18 C 0.103 3.897 19 C 0.537 3.463 20 O -0.555 6.555 21 C -0.277 4.277 22 Cl -0.045 7.045 23 H 0.050 0.950 24 H 0.047 0.953 25 H 0.046 0.954 26 H 0.079 0.921 27 H 0.064 0.936 28 H 0.269 0.731 29 H 0.404 0.596 30 H 0.207 0.793 31 H 0.065 0.935 32 H 0.083 0.917 33 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.909 4.164 0.025 9.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.177 4.177 3 C 0.131 3.869 4 H 0.059 0.941 5 C -0.589 4.589 6 H 0.100 0.900 7 C -0.120 4.120 8 N -0.511 5.511 9 Si 0.678 3.322 10 H -0.197 1.197 11 H -0.208 1.208 12 H -0.172 1.172 13 N -0.281 5.281 14 C 0.150 3.850 15 C -0.117 4.117 16 N -0.017 5.017 17 N -0.256 5.256 18 C -0.038 4.038 19 C 0.335 3.665 20 O -0.435 6.435 21 C -0.324 4.324 22 Cl -0.017 7.017 23 H 0.069 0.931 24 H 0.067 0.933 25 H 0.065 0.935 26 H 0.097 0.903 27 H 0.083 0.917 28 H 0.080 0.920 29 H 0.241 0.759 30 H 0.224 0.776 31 H 0.084 0.916 32 H 0.101 0.899 33 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -8.877 5.062 -0.120 10.220 hybrid contribution -0.289 -1.288 0.043 1.321 sum -9.166 3.775 -0.077 9.913 Atomic orbital electron populations 1.21889 0.97493 1.00723 1.01273 1.22290 0.93654 0.98496 1.03214 1.19431 0.95967 0.89562 0.81899 0.94085 1.21227 0.88268 1.44985 1.04454 0.90000 1.24870 0.94754 0.93784 0.98580 1.69923 1.09510 1.42029 1.29650 0.87424 0.81636 0.79140 0.84004 1.19652 1.20831 1.17178 1.45381 1.64350 1.03031 1.15325 1.18731 0.87756 0.86555 0.91915 1.24089 0.99710 0.88671 0.99199 1.75060 1.07646 1.10455 1.08508 1.49346 1.57271 1.09156 1.09874 1.21690 1.02780 0.75716 1.03625 1.16395 0.80056 0.86965 0.83041 1.90934 1.48513 1.71176 1.32851 1.20743 1.26917 0.92271 0.92494 1.98274 1.93111 1.71584 1.38755 0.93071 0.93336 0.93496 0.90319 0.91720 0.92048 0.75862 0.77642 0.91592 0.89858 0.89261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.27 9.85 37.15 0.37 -1.91 16 2 C -0.14 -2.40 4.86 -26.73 -0.13 -2.53 16 3 C 0.23 4.38 1.23 -69.08 -0.09 4.29 16 4 H 0.04 0.74 5.26 -51.93 -0.27 0.47 16 5 C -0.55 -12.86 9.14 -34.44 -0.31 -13.18 16 6 H 0.08 2.19 8.06 -52.49 -0.42 1.77 16 7 C 0.09 2.10 5.37 -17.82 -0.10 2.00 16 8 N -0.88 -23.65 13.96 55.43 0.77 -22.88 16 9 Si 0.85 17.48 25.87 -169.99 -4.40 13.08 16 10 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 11 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 12 H -0.25 -4.58 5.31 56.52 0.30 -4.28 16 13 N -0.66 -11.43 4.39 -53.16 -0.23 -11.67 16 14 C 0.28 4.79 6.66 -83.74 -0.56 4.24 16 15 C 0.09 1.43 10.42 -17.09 -0.18 1.25 16 16 N -0.20 -3.31 11.53 30.81 0.36 -2.95 16 17 N -0.43 -7.17 3.91 -70.38 -0.27 -7.44 16 18 C 0.10 1.28 10.72 59.85 0.64 1.92 16 19 C 0.54 10.15 7.48 -15.50 -0.12 10.03 16 20 O -0.55 -11.60 16.19 4.78 0.08 -11.52 16 21 C -0.28 -5.07 6.39 -38.79 -0.25 -5.31 16 22 Cl -0.05 -0.78 27.26 -51.86 -1.41 -2.19 16 23 H 0.05 0.72 7.55 -51.93 -0.39 0.33 16 24 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 25 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 26 H 0.08 1.44 4.69 -51.93 -0.24 1.20 16 27 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 28 H 0.27 6.85 8.31 -40.82 -0.34 6.51 16 29 H 0.40 6.67 7.35 -40.82 -0.30 6.37 16 30 H 0.21 3.25 6.27 -52.49 -0.33 2.92 16 31 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 32 H 0.08 0.83 8.14 -51.93 -0.42 0.41 16 33 H 0.09 1.09 7.40 -51.93 -0.38 0.70 16 LS Contribution 290.34 15.07 4.38 4.38 Total: -1.00 -28.09 290.34 -5.15 -33.24 By element: Atomic # 1 Polarization: 10.83 SS G_CDS: -3.70 Total: 7.14 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -0.72 Total: 0.81 kcal Atomic # 7 Polarization: -45.56 SS G_CDS: 0.62 Total: -44.94 kcal Atomic # 8 Polarization: -11.60 SS G_CDS: 0.08 Total: -11.52 kcal Atomic # 14 Polarization: 17.48 SS G_CDS: -4.40 Total: 13.08 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.41 Total: -2.19 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -28.09 -5.15 -33.24 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273880167.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.804 kcal (2) G-P(sol) polarization free energy of solvation -28.091 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.150 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.241 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.563 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds