Wall clock time and date at job start Mon Mar 30 2020 01:10:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53007 * 109.47088 * 2 1 4 4 H 1.09002 * 109.47067 * 54.72543 * 3 2 1 5 5 C 1.50701 * 109.47024 * 174.73007 * 3 2 1 6 6 H 1.07992 * 120.00174 * 120.00236 * 5 3 2 7 7 C 1.37880 * 119.99629 * 299.99345 * 5 3 2 8 8 N 1.31520 * 119.99652 * 180.02562 * 7 5 3 9 9 Si 1.86797 * 120.00381 * 0.02562 * 7 5 3 10 10 H 1.48493 * 109.47264 * 89.99548 * 9 7 5 11 11 H 1.48499 * 109.47095 * 209.99695 * 9 7 5 12 12 H 1.48503 * 109.46950 * 329.99649 * 9 7 5 13 13 N 1.46501 * 109.46723 * 294.72571 * 3 2 1 14 14 C 1.38483 * 119.99512 * 158.00381 * 13 3 2 15 15 C 1.41118 * 120.30385 * 354.69104 * 14 13 3 16 16 N 1.30349 * 120.41028 * 179.72011 * 15 14 13 17 17 N 1.39867 * 121.03632 * 0.54317 * 16 15 14 18 18 C 1.46497 * 119.72345 * 179.71993 * 17 16 15 19 19 C 1.34769 * 120.55625 * 359.73946 * 17 16 15 20 20 O 1.22147 * 120.20847 * 179.97438 * 19 17 16 21 21 C 1.38308 * 120.29946 * 174.97015 * 14 13 3 22 22 Cl 1.73601 * 120.48700 * 0.02562 * 21 14 13 23 23 H 1.09003 * 109.46954 * 185.07056 * 1 2 3 24 24 H 1.09001 * 109.47239 * 305.06691 * 1 2 3 25 25 H 1.08998 * 109.46989 * 65.07099 * 1 2 3 26 26 H 1.08990 * 109.47683 * 239.99664 * 2 1 3 27 27 H 1.09004 * 109.46967 * 119.99673 * 2 1 3 28 28 H 0.97002 * 119.99834 * 180.02562 * 8 7 5 29 29 H 0.96999 * 120.00140 * 338.00050 * 13 3 2 30 30 H 1.08001 * 119.79208 * 359.97438 * 15 14 13 31 31 H 1.08999 * 109.47280 * 270.01801 * 18 17 16 32 32 H 1.09000 * 109.46963 * 30.02106 * 18 17 16 33 33 H 1.09000 * 109.47261 * 150.01969 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 1 1.6015 1.9829 0.8390 5 6 3.5413 1.4446 0.1305 6 1 4.1501 1.8879 -0.6435 7 6 4.1377 0.8805 1.2383 8 7 5.4479 0.8826 1.3524 9 14 3.0849 0.1132 2.5770 10 1 2.8653 -1.3234 2.2717 11 1 3.7763 0.2412 3.8849 12 1 1.7759 0.8118 2.6386 13 7 1.6580 2.0955 -1.2546 14 6 1.5885 3.4769 -1.3230 15 6 1.7744 4.2575 -0.1622 16 7 1.7148 5.5581 -0.2252 17 7 1.4553 6.2103 -1.4349 18 6 1.3886 7.6733 -1.4716 19 6 1.2659 5.5043 -2.5671 20 8 1.0393 6.0804 -3.6201 21 6 1.3304 4.1037 -2.5285 22 17 1.0893 3.1707 -3.9725 23 1 -0.3633 -1.0237 0.0908 24 1 -0.3634 0.5904 0.8411 25 1 -0.3633 0.4331 -0.9319 26 1 1.8934 -0.5138 -0.8898 27 1 1.8933 -0.5138 0.8900 28 1 5.8675 0.4855 2.1316 29 1 1.4539 1.5602 -2.0374 30 1 1.9714 3.7744 0.7835 31 1 0.3638 7.9951 -1.2864 32 1 2.0434 8.0862 -0.7043 33 1 1.7089 8.0272 -2.4515 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273880170.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:10:01 Heat of formation + Delta-G solvation = 24.749152 kcal Electronic energy + Delta-G solvation = -18950.507491 eV Core-core repulsion = 15845.756690 eV Total energy + Delta-G solvation = -3104.750801 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.53741 -38.00281 -36.53075 -35.95789 -34.04805 -32.47059 -31.88528 -29.96678 -27.73040 -26.67835 -24.03702 -23.23701 -22.15712 -20.72209 -17.93613 -17.53977 -17.08970 -16.93904 -15.79551 -15.25726 -15.13688 -14.55439 -13.95334 -13.68913 -13.30543 -13.20957 -12.92552 -12.67263 -12.38805 -12.26800 -12.14350 -11.73466 -11.53665 -11.13736 -10.95111 -10.93581 -10.54537 -10.50480 -10.16814 -9.79712 -9.52127 -9.48542 -8.88709 -8.46215 -7.32652 -6.39499 -4.45572 0.87240 2.23882 2.29061 2.76041 3.01973 3.09580 3.17351 3.63356 3.78302 4.07475 4.52206 4.84981 5.03631 5.16173 5.45672 5.47125 5.53249 5.54556 5.68403 5.74421 5.93109 6.10825 6.14799 6.26198 6.27938 6.32289 6.47889 6.69881 7.19428 7.36613 7.78010 7.96112 8.16354 8.31040 8.66092 9.16769 10.72418 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021390 B = 0.006596 C = 0.005775 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1308.685844 B = 4243.901105 C = 4847.696588 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.141 4.141 3 C 0.231 3.769 4 H 0.047 0.953 5 C -0.546 4.546 6 H 0.083 0.917 7 C 0.081 3.919 8 N -0.881 5.881 9 Si 0.878 3.122 10 H -0.274 1.274 11 H -0.291 1.291 12 H -0.262 1.262 13 N -0.665 5.665 14 C 0.279 3.721 15 C 0.088 3.912 16 N -0.204 5.204 17 N -0.435 5.435 18 C 0.103 3.897 19 C 0.537 3.463 20 O -0.555 6.555 21 C -0.276 4.276 22 Cl -0.046 7.046 23 H 0.048 0.952 24 H 0.051 0.949 25 H 0.051 0.949 26 H 0.069 0.931 27 H 0.068 0.932 28 H 0.270 0.730 29 H 0.403 0.597 30 H 0.206 0.794 31 H 0.065 0.935 32 H 0.083 0.917 33 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.135 3.815 -0.665 9.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.179 4.179 3 C 0.129 3.871 4 H 0.064 0.936 5 C -0.584 4.584 6 H 0.101 0.899 7 C -0.124 4.124 8 N -0.516 5.516 9 Si 0.708 3.292 10 H -0.201 1.201 11 H -0.218 1.218 12 H -0.187 1.187 13 N -0.284 5.284 14 C 0.154 3.846 15 C -0.115 4.115 16 N -0.017 5.017 17 N -0.256 5.256 18 C -0.038 4.038 19 C 0.336 3.664 20 O -0.435 6.435 21 C -0.323 4.323 22 Cl -0.017 7.017 23 H 0.067 0.933 24 H 0.070 0.930 25 H 0.071 0.929 26 H 0.088 0.912 27 H 0.086 0.914 28 H 0.080 0.920 29 H 0.240 0.760 30 H 0.223 0.777 31 H 0.083 0.917 32 H 0.102 0.898 33 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -8.982 4.755 -0.564 10.179 hybrid contribution -0.397 -1.660 -0.151 1.714 sum -9.379 3.095 -0.715 9.902 Atomic orbital electron populations 1.21889 0.97024 1.00948 1.01519 1.22213 0.94140 0.98812 1.02749 1.19568 0.96551 0.89487 0.81534 0.93580 1.21284 0.88535 1.40729 1.07886 0.89858 1.24919 0.94854 0.95022 0.97619 1.69866 1.08879 1.43395 1.29488 0.86997 0.80687 0.80156 0.81406 1.20090 1.21755 1.18656 1.45344 1.65336 1.01872 1.15803 1.18698 0.87582 0.86449 0.91915 1.24038 0.99541 0.88479 0.99418 1.75045 1.09549 1.10536 1.06543 1.49337 1.64038 1.08093 1.04150 1.21684 1.02613 0.75361 1.04140 1.16393 0.79169 0.87114 0.83774 1.90932 1.52806 1.71532 1.28219 1.20735 1.31924 0.91485 0.88175 1.98273 1.96065 1.71015 1.36395 0.93319 0.92984 0.92941 0.91204 0.91424 0.92004 0.75983 0.77728 0.91673 0.89800 0.89272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.21 9.74 37.16 0.36 -1.85 16 2 C -0.14 -2.45 4.95 -26.73 -0.13 -2.58 16 3 C 0.23 4.35 1.28 -69.08 -0.09 4.26 16 4 H 0.05 0.84 5.49 -51.93 -0.29 0.56 16 5 C -0.55 -12.93 9.29 -34.44 -0.32 -13.25 16 6 H 0.08 2.27 8.06 -52.49 -0.42 1.84 16 7 C 0.08 2.01 5.45 -17.82 -0.10 1.92 16 8 N -0.88 -24.08 13.96 55.43 0.77 -23.30 16 9 Si 0.88 18.42 24.41 -169.99 -4.15 14.27 16 10 H -0.27 -5.66 6.83 56.52 0.39 -5.28 16 11 H -0.29 -6.28 7.11 56.52 0.40 -5.88 16 12 H -0.26 -5.00 6.53 56.52 0.37 -4.63 16 13 N -0.67 -11.45 4.73 -53.16 -0.25 -11.71 16 14 C 0.28 4.87 6.60 -83.74 -0.55 4.32 16 15 C 0.09 1.46 10.46 -17.09 -0.18 1.28 16 16 N -0.20 -3.33 11.53 30.81 0.36 -2.97 16 17 N -0.43 -7.24 3.91 -70.39 -0.27 -7.51 16 18 C 0.10 1.30 10.72 59.85 0.64 1.94 16 19 C 0.54 10.27 7.48 -15.50 -0.12 10.15 16 20 O -0.55 -11.71 16.19 4.78 0.08 -11.64 16 21 C -0.28 -5.11 6.39 -38.80 -0.25 -5.36 16 22 Cl -0.05 -0.79 27.26 -51.86 -1.41 -2.21 16 23 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 25 H 0.05 0.69 7.90 -51.93 -0.41 0.28 16 26 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 27 H 0.07 1.27 3.21 -51.93 -0.17 1.10 16 28 H 0.27 6.93 8.31 -40.82 -0.34 6.59 16 29 H 0.40 6.55 7.29 -40.82 -0.30 6.26 16 30 H 0.21 3.17 6.24 -52.49 -0.33 2.84 16 31 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 32 H 0.08 0.87 8.14 -51.93 -0.42 0.45 16 33 H 0.09 1.13 7.41 -51.93 -0.38 0.74 16 LS Contribution 289.42 15.07 4.36 4.36 Total: -1.00 -28.62 289.42 -4.84 -33.47 By element: Atomic # 1 Polarization: 10.00 SS G_CDS: -3.59 Total: 6.41 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -0.73 Total: 0.83 kcal Atomic # 7 Polarization: -46.10 SS G_CDS: 0.60 Total: -45.49 kcal Atomic # 8 Polarization: -11.71 SS G_CDS: 0.08 Total: -11.64 kcal Atomic # 14 Polarization: 18.42 SS G_CDS: -4.15 Total: 14.27 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.41 Total: -2.21 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -28.62 -4.84 -33.47 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273880170.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.217 kcal (2) G-P(sol) polarization free energy of solvation -28.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.468 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds