Wall clock time and date at job start Mon Mar 30 2020 01:15:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52998 * 109.47527 * 2 1 4 4 N 1.46498 * 109.47143 * 179.97438 * 3 2 1 5 5 C 1.37088 * 120.00111 * 264.53778 * 4 3 2 6 6 H 1.08003 * 119.99929 * 146.01633 * 5 4 3 7 7 C 1.38957 * 120.00350 * 326.02206 * 5 4 3 8 8 N 1.31411 * 119.99790 * 337.79976 * 7 5 4 9 9 Si 1.86802 * 120.00072 * 157.80094 * 7 5 4 10 10 H 1.48498 * 109.47361 * 359.97438 * 9 7 5 11 11 H 1.48494 * 109.46838 * 120.00086 * 9 7 5 12 12 H 1.48499 * 109.46979 * 239.99729 * 9 7 5 13 13 C 1.34771 * 119.99896 * 84.54321 * 4 3 2 14 14 O 1.21295 * 120.00237 * 359.97438 * 13 4 3 15 15 C 1.50698 * 120.00347 * 179.97438 * 13 4 3 16 16 N 1.46504 * 109.47422 * 179.97438 * 15 13 4 17 17 C 1.35041 * 126.03425 * 125.00358 * 16 15 13 18 18 C 1.35375 * 107.72554 * 179.97438 * 17 16 15 19 19 Cl 1.73598 * 126.04777 * 179.97438 * 18 17 16 20 20 C 1.39930 * 107.90710 * 359.97438 * 18 17 16 21 21 N 1.30849 * 108.21176 * 359.75563 * 20 18 17 22 22 H 1.09007 * 109.46862 * 59.99737 * 1 2 3 23 23 H 1.08993 * 109.47371 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.46985 * 300.00401 * 1 2 3 25 25 H 1.08998 * 109.46985 * 239.99598 * 2 1 3 26 26 H 1.09007 * 109.46862 * 120.00263 * 2 1 3 27 27 H 1.08998 * 109.46830 * 60.00009 * 3 2 1 28 28 H 1.08999 * 109.46937 * 300.00100 * 3 2 1 29 29 H 0.96996 * 119.99936 * 179.97438 * 8 7 5 30 30 H 1.08997 * 109.47181 * 300.00194 * 15 13 4 31 31 H 1.08997 * 109.47127 * 59.99780 * 15 13 4 32 32 H 1.07996 * 126.14030 * 359.93415 * 17 16 15 33 33 H 1.08002 * 125.89221 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 7 3.5051 1.4423 0.0006 5 6 4.1901 1.5555 1.1827 6 1 5.1317 1.0426 1.3124 7 6 3.6729 2.3299 2.2141 8 7 2.8022 3.2783 1.9506 9 14 4.2155 2.0230 3.9750 10 1 5.1952 0.9074 4.0039 11 1 4.8473 3.2515 4.5195 12 1 3.0347 1.6656 4.8016 13 6 4.1794 1.3311 -1.1610 14 8 3.5734 1.2307 -2.2069 15 6 5.6864 1.3316 -1.1605 16 7 6.1753 1.1993 -2.5352 17 6 7.0306 2.0381 -3.1584 18 6 7.2301 1.5671 -4.4118 19 17 8.2474 2.2834 -5.6224 20 6 6.4712 0.4007 -4.5589 21 7 5.8433 0.1766 -3.4330 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8899 25 1 1.8933 -0.5139 -0.8899 26 1 1.8933 -0.5139 0.8900 27 1 1.6768 1.9562 0.8900 28 1 1.6768 1.9563 -0.8900 29 1 2.4410 3.8186 2.6706 30 1 6.0493 2.2666 -0.7338 31 1 6.0498 0.4949 -0.5639 32 1 7.4753 2.9258 -2.7334 33 1 6.4170 -0.2116 -5.4470 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000287934083.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:15:35 Heat of formation + Delta-G solvation = 38.143526 kcal Electronic energy + Delta-G solvation = -18603.539422 eV Core-core repulsion = 15499.369445 eV Total energy + Delta-G solvation = -3104.169977 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.92770 -38.62126 -36.21989 -35.24819 -33.11935 -32.52784 -31.40907 -29.71923 -27.37320 -25.70970 -24.35098 -21.43623 -20.87762 -20.52594 -19.25870 -17.54837 -16.70363 -16.03843 -15.05897 -14.82149 -14.53366 -14.25149 -13.83614 -13.76205 -13.65517 -13.06628 -12.75658 -12.61527 -11.93285 -11.65584 -11.55210 -11.43949 -11.24063 -11.11120 -11.05455 -10.75952 -10.45144 -10.38153 -10.17407 -9.82928 -9.43405 -9.18381 -8.57927 -8.07536 -7.69751 -6.55742 -4.24578 2.05698 2.25449 2.91867 2.98153 3.10523 3.12183 3.14688 3.68821 3.94586 4.48146 4.80978 4.97132 5.08366 5.40865 5.71515 5.74135 5.77643 5.80921 5.88117 5.94049 6.12589 6.43386 6.51133 6.62244 6.66608 6.78009 7.00892 7.12084 7.21004 7.37133 7.73353 7.91846 8.18209 8.88780 9.31013 9.75212 10.44588 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021918 B = 0.004984 C = 0.004300 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1277.159306 B = 5616.672323 C = 6510.818196 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.135 4.135 3 C 0.118 3.882 4 N -0.432 5.432 5 C -0.354 4.354 6 H 0.091 0.909 7 C 0.048 3.952 8 N -0.851 5.851 9 Si 0.914 3.086 10 H -0.266 1.266 11 H -0.280 1.280 12 H -0.278 1.278 13 C 0.455 3.545 14 O -0.579 6.579 15 C 0.129 3.871 16 N -0.335 5.335 17 C 0.071 3.929 18 C -0.194 4.194 19 Cl -0.058 7.058 20 C 0.045 3.955 21 N -0.247 5.247 22 H 0.050 0.950 23 H 0.045 0.955 24 H 0.051 0.949 25 H 0.054 0.946 26 H 0.057 0.943 27 H 0.108 0.892 28 H 0.051 0.949 29 H 0.272 0.728 30 H 0.123 0.877 31 H 0.105 0.895 32 H 0.179 0.821 33 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.931 -1.913 -3.893 7.348 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.173 4.173 3 C -0.006 4.006 4 N -0.151 5.151 5 C -0.481 4.481 6 H 0.109 0.891 7 C -0.159 4.159 8 N -0.486 5.486 9 Si 0.739 3.261 10 H -0.190 1.190 11 H -0.206 1.206 12 H -0.203 1.203 13 C 0.241 3.759 14 O -0.462 6.462 15 C 0.005 3.995 16 N -0.116 5.116 17 C -0.078 4.078 18 C -0.233 4.233 19 Cl -0.030 7.030 20 C -0.143 4.143 21 N -0.068 5.068 22 H 0.069 0.931 23 H 0.064 0.936 24 H 0.070 0.930 25 H 0.073 0.927 26 H 0.076 0.924 27 H 0.126 0.874 28 H 0.070 0.930 29 H 0.082 0.918 30 H 0.141 0.859 31 H 0.123 0.877 32 H 0.197 0.803 33 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges 4.709 -2.505 -3.591 6.430 hybrid contribution 0.873 0.642 0.521 1.202 sum 5.582 -1.864 -3.071 6.638 Atomic orbital electron populations 1.21649 0.96511 1.00513 1.01372 1.21832 0.94799 0.99311 1.01407 1.21462 0.80770 0.94695 1.03628 1.43430 1.05008 1.62215 1.04472 1.19481 1.07868 1.29900 0.90860 0.89116 1.25339 0.96750 0.93279 1.00549 1.69946 1.29463 1.15805 1.33398 0.86096 0.78958 0.78661 0.82343 1.19037 1.20575 1.20310 1.20117 0.88271 0.82932 0.84570 1.90626 1.69201 1.54999 1.31412 1.21589 0.96277 1.05335 0.76298 1.48179 1.33115 1.18421 1.11920 1.22180 0.95536 0.97270 0.92800 1.20642 1.08688 1.01616 0.92312 1.98285 1.67118 1.83226 1.54404 1.23791 0.96055 0.96526 0.97884 1.77621 1.19884 1.10061 0.99197 0.93133 0.93560 0.93010 0.92728 0.92381 0.87439 0.93002 0.91770 0.85930 0.87685 0.80341 0.79852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.40 9.91 37.16 0.37 -2.04 16 2 C -0.13 -2.74 6.22 -26.73 -0.17 -2.91 16 3 C 0.12 2.74 4.90 -4.04 -0.02 2.72 16 4 N -0.43 -10.30 2.56 -114.82 -0.29 -10.60 16 5 C -0.35 -8.21 8.70 -14.94 -0.13 -8.34 16 6 H 0.09 1.96 6.97 -52.48 -0.37 1.59 16 7 C 0.05 1.12 4.92 -17.47 -0.09 1.04 16 8 N -0.85 -21.02 11.34 55.50 0.63 -20.39 16 9 Si 0.91 17.99 29.61 -169.99 -5.03 12.96 16 10 H -0.27 -5.13 7.11 56.52 0.40 -4.72 16 11 H -0.28 -5.53 7.11 56.52 0.40 -5.13 16 12 H -0.28 -5.54 7.11 56.52 0.40 -5.14 16 13 C 0.45 10.64 7.63 -10.99 -0.08 10.55 16 14 O -0.58 -15.28 15.39 5.54 0.09 -15.19 16 15 C 0.13 2.41 5.65 -5.19 -0.03 2.38 16 16 N -0.34 -6.21 3.40 -62.51 -0.21 -6.42 16 17 C 0.07 1.11 11.43 -17.16 -0.20 0.91 16 18 C -0.19 -2.97 6.65 -39.97 -0.27 -3.23 16 19 Cl -0.06 -0.76 29.30 -51.86 -1.52 -2.28 16 20 C 0.04 0.73 12.02 -17.34 -0.21 0.52 16 21 N -0.25 -4.86 11.66 30.64 0.36 -4.50 16 22 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 23 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.05 0.84 8.14 -51.93 -0.42 0.41 16 25 H 0.05 1.18 8.14 -51.93 -0.42 0.76 16 26 H 0.06 1.18 8.14 -51.93 -0.42 0.75 16 27 H 0.11 2.62 5.35 -51.93 -0.28 2.34 16 28 H 0.05 1.27 7.59 -51.93 -0.39 0.88 16 29 H 0.27 6.32 8.31 -40.82 -0.34 5.98 16 30 H 0.12 2.03 8.03 -51.93 -0.42 1.62 16 31 H 0.11 1.81 7.64 -51.93 -0.40 1.41 16 32 H 0.18 2.16 8.06 -52.49 -0.42 1.74 16 33 H 0.18 2.38 8.06 -52.49 -0.42 1.96 16 LS Contribution 303.32 15.07 4.57 4.57 Total: -1.00 -28.97 303.32 -6.18 -35.15 By element: Atomic # 1 Polarization: 9.06 SS G_CDS: -3.95 Total: 5.11 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -0.82 Total: 1.59 kcal Atomic # 7 Polarization: -42.40 SS G_CDS: 0.48 Total: -41.91 kcal Atomic # 8 Polarization: -15.28 SS G_CDS: 0.09 Total: -15.19 kcal Atomic # 14 Polarization: 17.99 SS G_CDS: -5.03 Total: 12.96 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.52 Total: -2.28 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -28.97 -6.18 -35.15 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000287934083.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.294 kcal (2) G-P(sol) polarization free energy of solvation -28.972 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.151 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds