Wall clock time and date at job start Mon Mar 30 2020 01:02:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.30858 * 125.89131 * 2 1 4 4 N 1.40081 * 108.22233 * 179.76522 * 3 2 1 5 5 C 1.46500 * 126.03730 * 180.29668 * 4 3 2 6 6 C 1.50695 * 109.47275 * 270.13988 * 5 4 3 7 7 O 1.21290 * 120.00276 * 359.97438 * 6 5 4 8 8 N 1.34778 * 120.00063 * 180.02562 * 6 5 4 9 9 C 1.46500 * 119.99806 * 359.97438 * 8 6 5 10 10 C 1.37098 * 120.00291 * 179.97438 * 8 6 5 11 11 H 1.08005 * 119.99540 * 24.39608 * 10 8 6 12 12 C 1.38944 * 120.00252 * 204.38790 * 10 8 6 13 13 N 1.31413 * 120.00134 * 12.64953 * 12 10 8 14 14 Si 1.86801 * 120.00264 * 192.64522 * 12 10 8 15 15 H 1.48501 * 109.46953 * 90.00376 * 14 12 10 16 16 H 1.48496 * 109.47256 * 210.00314 * 14 12 10 17 17 H 1.48507 * 109.46835 * 330.00354 * 14 12 10 18 18 C 1.35051 * 107.92484 * 0.41800 * 4 3 2 19 19 C 1.50700 * 126.13347 * 179.84904 * 18 4 3 20 20 C 1.35369 * 107.72953 * 359.58486 * 18 4 3 21 21 Cl 1.73604 * 126.04865 * 180.29898 * 20 18 4 22 22 H 1.09006 * 109.47370 * 269.97868 * 1 2 3 23 23 H 1.08999 * 109.47272 * 29.98089 * 1 2 3 24 24 H 1.08994 * 109.47033 * 149.98032 * 1 2 3 25 25 H 1.08997 * 109.47073 * 30.14224 * 5 4 3 26 26 H 1.09006 * 109.46742 * 150.13746 * 5 4 3 27 27 H 1.09003 * 109.47288 * 85.86776 * 9 8 6 28 28 H 1.09006 * 109.47084 * 205.86716 * 9 8 6 29 29 H 1.09007 * 109.47302 * 325.86565 * 9 8 6 30 30 H 0.96994 * 120.00522 * 179.97438 * 13 12 10 31 31 H 1.09004 * 109.47201 * 269.71113 * 19 18 4 32 32 H 1.08998 * 109.47136 * 149.71266 * 19 18 4 33 33 H 1.08994 * 109.47282 * 29.71462 * 19 18 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2742 1.0601 0.0000 4 7 3.6089 0.6350 0.0055 5 6 4.7896 1.5021 0.0134 6 6 5.1994 1.8059 -1.4046 7 8 4.5677 1.3431 -2.3308 8 7 6.2686 2.5909 -1.6436 9 6 7.0320 3.1494 -0.5249 10 6 6.6417 2.8669 -2.9337 11 1 5.9136 2.8131 -3.7296 12 6 7.9564 3.2159 -3.2171 13 7 8.8920 3.0437 -2.3105 14 14 8.3941 3.9298 -4.8869 15 1 8.2732 5.4092 -4.8398 16 1 9.7892 3.5581 -5.2339 17 1 7.4677 3.3898 -5.9143 18 6 3.6149 -0.7155 -0.0007 19 6 4.8360 -1.5987 -0.0011 20 6 2.3274 -1.1335 -0.0003 21 17 1.7892 -2.7840 0.0004 22 1 -0.3634 -0.0004 1.0277 23 1 -0.3634 0.8901 -0.5135 24 1 -0.3633 -0.8898 -0.5141 25 1 4.5539 2.4321 0.5307 26 1 5.6075 0.9975 0.5279 27 1 7.7822 2.4281 -0.2009 28 1 7.5248 4.0678 -0.8439 29 1 6.3568 3.3679 0.3026 30 1 9.8098 3.2870 -2.5084 31 1 5.1304 -1.8112 -1.0289 32 1 4.6089 -2.5330 0.5123 33 1 5.6520 -1.0908 0.5129 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000335921055.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:02:50 Heat of formation + Delta-G solvation = 39.875829 kcal Electronic energy + Delta-G solvation = -18701.931975 eV Core-core repulsion = 15597.837116 eV Total energy + Delta-G solvation = -3104.094859 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.14269 -38.48971 -36.19703 -34.89274 -33.74542 -31.93124 -31.48219 -29.56770 -26.83342 -26.65815 -25.75382 -24.05944 -20.38893 -19.97917 -18.77665 -17.07700 -16.62532 -16.21192 -15.16242 -14.95432 -14.46168 -14.16737 -13.92080 -13.73361 -13.17415 -13.05703 -12.60191 -12.41602 -12.32105 -12.05846 -11.86983 -11.68061 -11.49263 -11.39712 -11.35597 -11.01436 -10.97170 -10.42719 -10.39922 -10.18132 -9.13290 -9.11182 -8.54524 -7.96937 -7.82023 -6.45190 -4.01952 1.96785 2.24939 2.79235 3.02680 3.09060 3.19575 3.25373 3.65597 4.03965 4.64303 4.73839 4.77675 4.98443 5.10174 5.29923 5.42607 5.45210 5.56221 5.68547 5.69312 5.81687 5.92750 6.02220 6.12600 6.23768 6.66245 6.68818 7.02575 7.10418 7.45705 7.89847 7.98329 8.33599 9.03903 9.24188 9.77875 10.59480 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.032612 B = 0.004512 C = 0.004455 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 858.371068 B = 6204.057061 C = 6283.308921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 C 0.083 3.917 3 N -0.275 5.275 4 N -0.331 5.331 5 C 0.120 3.880 6 C 0.428 3.572 7 O -0.570 6.570 8 N -0.439 5.439 9 C 0.105 3.895 10 C -0.306 4.306 11 H 0.099 0.901 12 C 0.033 3.967 13 N -0.880 5.880 14 Si 0.928 3.072 15 H -0.276 1.276 16 H -0.283 1.283 17 H -0.268 1.268 18 C 0.121 3.879 19 C -0.095 4.095 20 C -0.196 4.196 21 Cl -0.055 7.055 22 H 0.076 0.924 23 H 0.074 0.926 24 H 0.077 0.923 25 H 0.111 0.889 26 H 0.111 0.889 27 H 0.056 0.944 28 H 0.079 0.921 29 H 0.026 0.974 30 H 0.269 0.731 31 H 0.089 0.911 32 H 0.085 0.915 33 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.186 -6.051 8.630 12.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.084 4.084 3 N -0.097 5.097 4 N -0.111 5.111 5 C -0.005 4.005 6 C 0.213 3.787 7 O -0.453 6.453 8 N -0.158 5.158 9 C -0.039 4.039 10 C -0.434 4.434 11 H 0.116 0.884 12 C -0.170 4.170 13 N -0.519 5.519 14 Si 0.755 3.245 15 H -0.202 1.202 16 H -0.208 1.208 17 H -0.193 1.193 18 C -0.009 4.009 19 C -0.153 4.153 20 C -0.234 4.234 21 Cl -0.027 7.027 22 H 0.094 0.906 23 H 0.093 0.907 24 H 0.096 0.904 25 H 0.129 0.871 26 H 0.129 0.871 27 H 0.074 0.926 28 H 0.098 0.902 29 H 0.044 0.956 30 H 0.080 0.920 31 H 0.107 0.893 32 H 0.104 0.896 33 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -7.142 -4.981 8.182 11.949 hybrid contribution 0.573 -0.518 -0.734 1.065 sum -6.569 -5.499 7.449 11.353 Atomic orbital electron populations 1.20154 0.86410 1.03460 1.02822 1.22127 0.97051 0.89013 1.00209 1.77403 0.86121 1.21635 1.24561 1.47740 1.05070 1.03372 1.54948 1.21660 0.84175 0.95322 0.99354 1.20069 0.85723 0.83491 0.89371 1.90596 1.55553 1.54454 1.44711 1.43546 1.24726 1.40566 1.06985 1.21590 0.94241 1.00977 0.87062 1.19660 0.94517 1.44732 0.84515 0.88364 1.25356 0.94962 0.97233 0.99479 1.69969 1.01469 1.45572 1.34898 0.85889 0.77820 0.79126 0.81708 1.20221 1.20812 1.19292 1.20632 0.96061 0.85032 0.99214 1.20517 0.92684 0.97814 1.04323 1.20136 0.92016 0.86198 1.25066 1.98266 1.89856 1.16552 1.97987 0.90557 0.90677 0.90403 0.87063 0.87106 0.92584 0.90189 0.95573 0.92047 0.89262 0.89596 0.90724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.87 10.31 36.01 0.37 -0.50 16 2 C 0.08 1.41 7.22 -82.37 -0.59 0.81 16 3 N -0.27 -5.38 12.58 33.69 0.42 -4.95 16 4 N -0.33 -6.31 3.10 -58.28 -0.18 -6.50 16 5 C 0.12 2.18 5.33 -5.20 -0.03 2.15 16 6 C 0.43 10.19 7.70 -10.99 -0.08 10.10 16 7 O -0.57 -16.04 16.14 5.55 0.09 -15.95 16 8 N -0.44 -10.79 3.01 -122.19 -0.37 -11.16 16 9 C 0.11 2.16 8.44 59.85 0.51 2.67 16 10 C -0.31 -8.34 9.24 -14.94 -0.14 -8.48 16 11 H 0.10 2.85 7.45 -52.48 -0.39 2.46 16 12 C 0.03 0.86 5.04 -17.47 -0.09 0.77 16 13 N -0.88 -22.48 10.83 55.50 0.60 -21.88 16 14 Si 0.93 20.31 29.57 -169.99 -5.03 15.28 16 15 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 16 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 17 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 18 C 0.12 2.09 6.94 -82.20 -0.57 1.52 16 19 C -0.10 -1.33 9.95 36.01 0.36 -0.98 16 20 C -0.20 -3.26 6.63 -39.97 -0.27 -3.53 16 21 Cl -0.05 -0.75 28.59 -51.86 -1.48 -2.23 16 22 H 0.08 0.79 8.14 -51.93 -0.42 0.37 16 23 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.08 0.87 8.01 -51.93 -0.42 0.46 16 25 H 0.11 1.80 7.41 -51.93 -0.38 1.42 16 26 H 0.11 1.66 7.01 -51.93 -0.36 1.30 16 27 H 0.06 1.16 7.83 -51.93 -0.41 0.75 16 28 H 0.08 1.77 6.80 -51.93 -0.35 1.42 16 29 H 0.03 0.43 6.61 -51.93 -0.34 0.08 16 30 H 0.27 6.52 8.31 -40.82 -0.34 6.18 16 31 H 0.09 1.34 8.14 -51.93 -0.42 0.92 16 32 H 0.09 0.99 7.91 -51.93 -0.41 0.58 16 33 H 0.07 0.93 7.08 -51.93 -0.37 0.57 16 LS Contribution 300.78 15.07 4.53 4.53 Total: -1.00 -32.31 300.78 -5.78 -38.09 By element: Atomic # 1 Polarization: 4.06 SS G_CDS: -3.84 Total: 0.22 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: -0.53 Total: 4.54 kcal Atomic # 7 Polarization: -44.96 SS G_CDS: 0.48 Total: -44.48 kcal Atomic # 8 Polarization: -16.04 SS G_CDS: 0.09 Total: -15.95 kcal Atomic # 14 Polarization: 20.31 SS G_CDS: -5.03 Total: 15.28 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.48 Total: -2.23 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -32.31 -5.78 -38.09 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000335921055.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.967 kcal (2) G-P(sol) polarization free energy of solvation -32.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.091 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds