Wall clock time and date at job start Mon Mar 30 2020 01:11:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 H 1.09001 * 109.47563 * 305.00337 * 3 2 1 5 5 C 1.50700 * 109.47798 * 185.00026 * 3 2 1 6 6 H 1.07998 * 120.00370 * 240.00769 * 5 3 2 7 7 C 1.37878 * 119.99824 * 59.99855 * 5 3 2 8 8 N 1.31523 * 120.00027 * 0.02562 * 7 5 3 9 9 Si 1.86802 * 119.99983 * 180.02562 * 7 5 3 10 10 H 1.48496 * 109.47138 * 359.97438 * 9 7 5 11 11 H 1.48500 * 109.47111 * 119.99988 * 9 7 5 12 12 H 1.48503 * 109.46778 * 239.99962 * 9 7 5 13 13 N 1.46502 * 109.47005 * 64.99872 * 3 2 1 14 14 C 1.34776 * 120.00080 * 275.00208 * 13 3 2 15 15 O 1.21276 * 120.00121 * 0.02562 * 14 13 3 16 16 C 1.50698 * 119.99878 * 179.97438 * 14 13 3 17 17 N 1.46503 * 109.47045 * 179.97438 * 16 14 13 18 18 C 1.35048 * 126.03308 * 125.00402 * 17 16 14 19 19 C 1.35377 * 107.72304 * 179.97438 * 18 17 16 20 20 Cl 1.73600 * 126.04465 * 179.97438 * 19 18 17 21 21 C 1.39927 * 107.91094 * 359.97438 * 19 18 17 22 22 N 1.30851 * 108.21032 * 359.75409 * 21 19 18 23 23 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 24 24 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 25 25 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47153 * 120.00216 * 2 1 3 27 27 H 1.08998 * 109.47533 * 239.99846 * 2 1 3 28 28 H 0.96993 * 119.99651 * 179.97438 * 8 7 5 29 29 H 0.97001 * 119.99703 * 95.00546 * 13 3 2 30 30 H 1.08998 * 109.47466 * 299.99891 * 16 14 13 31 31 H 1.09003 * 109.47620 * 60.00219 * 16 14 13 32 32 H 1.07997 * 126.13973 * 359.93497 * 18 17 16 33 33 H 1.08000 * 125.89655 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 3.5419 1.4443 -0.1238 6 1 4.1473 1.8887 0.6523 7 6 4.1433 0.8784 -1.2280 8 7 3.4062 0.3374 -2.1734 9 14 6.0050 0.8801 -1.3812 10 1 6.5988 1.5453 -0.1938 11 1 6.4963 -0.5190 -1.4627 12 1 6.3999 1.6157 -2.6093 13 7 1.6525 2.0974 1.2518 14 6 0.4352 2.6643 1.3670 15 8 -0.3395 2.6319 0.4345 16 6 0.0363 3.3376 2.6549 17 7 -1.3221 3.8709 2.5268 18 6 -2.3615 3.6025 3.3461 19 6 -3.4352 4.2880 2.8879 20 17 -5.0239 4.2847 3.5878 21 6 -3.0380 4.9997 1.7505 22 7 -1.7706 4.7546 1.5367 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8933 -0.5139 0.8900 27 1 1.8934 -0.5138 -0.8899 28 1 3.8292 -0.0604 -2.9503 29 1 2.2720 2.1231 1.9978 30 1 0.0673 2.6129 3.4685 31 1 0.7277 4.1529 2.8680 32 1 -2.3402 2.9564 4.2113 33 1 -3.6679 5.6432 1.1542 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000356049077.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:16 Heat of formation + Delta-G solvation = 35.111905 kcal Electronic energy + Delta-G solvation = -18445.209278 eV Core-core repulsion = 15340.907840 eV Total energy + Delta-G solvation = -3104.301438 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.26573 -39.01083 -36.44915 -35.19889 -33.23263 -32.42026 -31.02119 -30.00477 -27.84168 -26.45380 -23.15126 -21.70380 -21.19896 -20.26157 -19.44980 -17.63887 -17.18147 -16.04262 -15.41421 -15.33378 -14.59586 -14.47281 -14.27106 -13.90820 -13.38401 -13.03024 -12.85979 -12.73771 -11.89629 -11.75862 -11.46900 -11.37494 -11.31883 -11.01884 -10.89605 -10.45779 -10.37140 -10.26337 -9.75932 -9.68285 -9.12743 -9.05300 -8.56755 -8.39906 -7.94017 -6.17894 -4.27899 1.71505 1.93002 2.64870 2.76541 3.16228 3.20107 3.28281 3.30288 3.83915 4.30111 4.59446 4.65626 4.96464 5.08317 5.13633 5.26582 5.48442 5.58998 6.31920 6.36845 6.36984 6.58063 6.73248 6.94766 7.12513 7.27283 7.33691 7.54360 7.59122 7.64562 7.82644 8.10944 8.51746 8.69857 8.98347 9.39443 10.87445 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.045620 B = 0.003735 C = 0.003632 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 613.616344 B = 7495.814750 C = 7706.438053 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.127 4.127 3 C 0.272 3.728 4 H 0.050 0.950 5 C -0.535 4.535 6 H 0.062 0.938 7 C 0.067 3.933 8 N -0.881 5.881 9 Si 0.902 3.098 10 H -0.273 1.273 11 H -0.283 1.283 12 H -0.283 1.283 13 N -0.705 5.705 14 C 0.486 3.514 15 O -0.517 6.517 16 C 0.109 3.891 17 N -0.345 5.345 18 C 0.070 3.930 19 C -0.188 4.188 20 Cl -0.051 7.051 21 C 0.053 3.947 22 N -0.244 5.244 23 H 0.049 0.951 24 H 0.035 0.965 25 H 0.023 0.977 26 H 0.031 0.969 27 H 0.100 0.900 28 H 0.265 0.735 29 H 0.389 0.611 30 H 0.122 0.878 31 H 0.113 0.887 32 H 0.181 0.819 33 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.076 5.209 13.015 16.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.166 4.166 3 C 0.171 3.829 4 H 0.068 0.932 5 C -0.574 4.574 6 H 0.080 0.920 7 C -0.137 4.137 8 N -0.518 5.518 9 Si 0.729 3.271 10 H -0.197 1.197 11 H -0.209 1.209 12 H -0.209 1.209 13 N -0.355 5.355 14 C 0.268 3.732 15 O -0.393 6.393 16 C -0.016 4.016 17 N -0.126 5.126 18 C -0.078 4.078 19 C -0.227 4.227 20 Cl -0.024 7.024 21 C -0.135 4.135 22 N -0.064 5.064 23 H 0.068 0.932 24 H 0.054 0.946 25 H 0.042 0.958 26 H 0.050 0.950 27 H 0.118 0.882 28 H 0.075 0.925 29 H 0.221 0.779 30 H 0.139 0.861 31 H 0.131 0.869 32 H 0.198 0.802 33 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges -8.569 5.245 11.441 15.226 hybrid contribution 0.441 -0.313 0.869 1.023 sum -8.128 4.932 12.310 15.554 Atomic orbital electron populations 1.21826 0.98361 0.98062 1.01066 1.21942 0.92517 0.99781 1.02381 1.18816 0.94312 0.89097 0.80681 0.93226 1.21243 0.90562 1.39170 1.06406 0.91973 1.24897 0.98693 0.94751 0.95353 1.69903 1.35112 1.37506 1.09301 0.86390 0.84729 0.77789 0.78165 1.19733 1.20853 1.20852 1.46451 1.14083 1.56038 1.18893 1.20151 0.83735 0.80453 0.88836 1.90772 1.51043 1.58119 1.39350 1.21748 0.79984 1.00157 0.99682 1.47894 1.08626 1.35349 1.20751 1.22169 0.87023 1.00872 0.97721 1.20691 0.88455 1.11303 1.02202 1.98306 1.22114 1.98266 1.83666 1.23886 0.93100 1.00427 0.96096 1.77698 1.11715 1.08296 1.08676 0.93165 0.94618 0.95795 0.94980 0.88193 0.92542 0.77890 0.86054 0.86879 0.80184 0.79456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.98 8.51 37.16 0.32 -2.66 16 2 C -0.13 -2.99 5.45 -26.74 -0.15 -3.14 16 3 C 0.27 6.57 2.24 -69.08 -0.15 6.42 16 4 H 0.05 1.42 7.58 -51.93 -0.39 1.03 16 5 C -0.54 -13.63 8.73 -34.44 -0.30 -13.93 16 6 H 0.06 1.50 7.74 -52.49 -0.41 1.10 16 7 C 0.07 1.74 5.29 -17.82 -0.09 1.65 16 8 N -0.88 -24.27 11.30 55.43 0.63 -23.64 16 9 Si 0.90 20.15 29.54 -169.99 -5.02 15.12 16 10 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 11 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 12 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 13 N -0.71 -13.32 5.02 -54.94 -0.28 -13.59 16 14 C 0.49 8.84 6.43 -10.99 -0.07 8.77 16 15 O -0.52 -11.79 12.86 5.56 0.07 -11.71 16 16 C 0.11 1.36 6.99 -5.19 -0.04 1.32 16 17 N -0.34 -4.92 3.40 -62.50 -0.21 -5.14 16 18 C 0.07 0.83 11.43 -17.16 -0.20 0.63 16 19 C -0.19 -2.36 6.65 -39.97 -0.27 -2.63 16 20 Cl -0.05 -0.56 29.30 -51.86 -1.52 -2.08 16 21 C 0.05 0.73 12.02 -17.34 -0.21 0.52 16 22 N -0.24 -4.07 11.66 30.64 0.36 -3.72 16 23 H 0.05 1.20 7.85 -51.93 -0.41 0.79 16 24 H 0.03 0.75 5.64 -51.93 -0.29 0.45 16 25 H 0.02 0.47 8.14 -51.93 -0.42 0.04 16 26 H 0.03 0.71 8.14 -51.93 -0.42 0.29 16 27 H 0.10 2.63 5.95 -51.93 -0.31 2.32 16 28 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 29 H 0.39 6.04 8.54 -40.82 -0.35 5.69 16 30 H 0.12 1.00 8.07 -51.93 -0.42 0.58 16 31 H 0.11 1.16 8.14 -51.93 -0.42 0.74 16 32 H 0.18 1.45 8.06 -52.49 -0.42 1.03 16 33 H 0.19 2.05 8.06 -52.49 -0.42 1.62 16 LS Contribution 298.36 15.07 4.50 4.50 Total: -1.00 -31.96 298.36 -6.46 -38.42 By element: Atomic # 1 Polarization: 8.71 SS G_CDS: -3.83 Total: 4.89 kcal Atomic # 6 Polarization: -1.88 SS G_CDS: -1.16 Total: -3.04 kcal Atomic # 7 Polarization: -46.59 SS G_CDS: 0.50 Total: -46.09 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: 0.07 Total: -11.71 kcal Atomic # 14 Polarization: 20.15 SS G_CDS: -5.02 Total: 15.12 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.52 Total: -2.08 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -31.96 -6.46 -38.42 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000356049077.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.531 kcal (2) G-P(sol) polarization free energy of solvation -31.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.571 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.420 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds