Wall clock time and date at job start Mon Mar 30 2020 01:11:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.47015 * 2 1 4 4 N 1.46496 * 109.47413 * 180.02562 * 3 2 1 5 5 C 1.36934 * 120.00298 * 269.49826 * 4 3 2 6 6 H 1.08001 * 119.99907 * 325.91136 * 5 4 3 7 7 C 1.38812 * 120.00439 * 145.91285 * 5 4 3 8 8 N 1.31624 * 119.99594 * 336.75624 * 7 5 4 9 9 Si 1.86798 * 120.00438 * 156.75610 * 7 5 4 10 10 H 1.48501 * 109.46850 * 0.02562 * 9 7 5 11 11 H 1.48503 * 109.47383 * 119.99931 * 9 7 5 12 12 H 1.48504 * 109.47233 * 240.00098 * 9 7 5 13 13 C 1.46504 * 119.99904 * 89.49055 * 4 3 2 14 14 C 1.50702 * 109.46523 * 90.00495 * 13 4 3 15 15 C 1.38229 * 119.98062 * 269.72141 * 14 13 4 16 16 C 1.38444 * 119.99872 * 179.77122 * 15 14 13 17 17 F 1.35105 * 120.01689 * 180.25784 * 16 15 14 18 18 C 1.38458 * 119.96425 * 0.50619 * 16 15 14 19 19 C 1.38286 * 119.95771 * 359.75274 * 18 16 15 20 20 Cl 1.73605 * 119.99835 * 180.02562 * 19 18 16 21 21 C 1.38206 * 119.98393 * 90.00291 * 14 13 4 22 22 H 1.09000 * 109.47306 * 59.99391 * 1 2 3 23 23 H 1.09003 * 109.46903 * 179.97438 * 1 2 3 24 24 H 1.08996 * 109.46929 * 299.99325 * 1 2 3 25 25 H 1.09006 * 109.46849 * 240.00665 * 2 1 3 26 26 H 1.08996 * 109.47717 * 120.00341 * 2 1 3 27 27 H 1.09006 * 109.46769 * 60.00616 * 3 2 1 28 28 H 1.09000 * 109.47580 * 300.00441 * 3 2 1 29 29 H 0.97001 * 120.00016 * 179.97438 * 8 7 5 30 30 H 1.08994 * 109.47176 * 209.99888 * 13 4 3 31 31 H 1.08994 * 109.47062 * 330.00861 * 13 4 3 32 32 H 1.08003 * 120.00010 * 0.02562 * 15 14 13 33 33 H 1.08002 * 120.01841 * 179.76575 * 18 16 15 34 34 H 1.08008 * 119.97524 * 359.95021 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5049 1.4426 -0.0006 5 6 4.1902 1.4529 1.1849 6 1 3.7897 1.9844 2.0355 7 6 5.3995 0.7802 1.2935 8 7 5.6762 -0.2124 0.4745 9 14 6.6342 1.2834 2.6018 10 1 6.0869 2.4178 3.3886 11 1 6.8937 0.1342 3.5058 12 1 7.9032 1.6981 1.9515 13 6 4.2369 1.4316 -1.2697 14 6 4.4878 2.8486 -1.7170 15 6 3.5684 3.4909 -2.5250 16 6 3.7962 4.7944 -2.9323 17 9 2.8953 5.4243 -3.7177 18 6 4.9503 5.4502 -2.5385 19 6 5.8716 4.8042 -1.7346 20 17 7.3186 5.6258 -1.2397 21 6 5.6398 3.5033 -1.3240 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 1.8933 -0.5138 -0.8901 26 1 1.8934 -0.5138 0.8899 27 1 1.6767 1.9563 0.8901 28 1 1.6766 1.9564 -0.8899 29 1 6.5215 -0.6823 0.5501 30 1 5.1894 0.9190 -1.1353 31 1 3.6475 0.9112 -2.0245 32 1 2.6703 2.9774 -2.8351 33 1 5.1307 6.4657 -2.8589 34 1 6.3594 2.9992 -0.6958 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000362509830.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:44 Heat of formation + Delta-G solvation = -22.812254 kcal Electronic energy + Delta-G solvation = -18665.131820 eV Core-core repulsion = 15538.398640 eV Total energy + Delta-G solvation = -3126.733180 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.66146 -38.86027 -36.48850 -35.83875 -33.04237 -31.63285 -30.10365 -29.96683 -26.06581 -25.62094 -22.50843 -22.31582 -21.15197 -19.93205 -17.33474 -16.56784 -16.11485 -15.84066 -15.37567 -14.86968 -14.47704 -14.30204 -13.92881 -13.40472 -13.23226 -13.06493 -12.74960 -12.53686 -11.72426 -11.57953 -11.42302 -11.19399 -11.04915 -10.90521 -10.80123 -10.73029 -10.47574 -10.36357 -10.09238 -10.02567 -9.74361 -8.64096 -8.42682 -8.27821 -6.78644 -5.93972 -3.44801 1.41370 1.51944 2.31839 3.28883 3.39567 3.42622 3.87325 4.40148 4.56682 5.06045 5.19058 5.29276 5.41309 5.49542 5.70417 5.74911 5.78688 5.89538 6.08157 6.21317 6.27614 6.35318 6.46643 6.49212 6.56342 6.59119 6.67994 6.98806 7.04614 7.15879 7.21385 7.49937 7.71907 8.35571 9.02395 9.65909 10.21711 11.06892 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.012757 B = 0.008549 C = 0.005467 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2194.334899 B = 3274.391956 C = 5120.404978 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.139 4.139 3 C 0.147 3.853 4 N -0.574 5.574 5 C -0.254 4.254 6 H 0.064 0.936 7 C 0.011 3.989 8 N -0.881 5.881 9 Si 0.888 3.112 10 H -0.274 1.274 11 H -0.289 1.289 12 H -0.284 1.284 13 C 0.168 3.832 14 C -0.031 4.031 15 C -0.151 4.151 16 C 0.101 3.899 17 F -0.144 7.144 18 C -0.171 4.171 19 C -0.009 4.009 20 Cl -0.076 7.076 21 C -0.098 4.098 22 H 0.044 0.956 23 H 0.043 0.957 24 H 0.047 0.953 25 H 0.052 0.948 26 H 0.064 0.936 27 H 0.044 0.956 28 H 0.034 0.966 29 H 0.257 0.743 30 H 0.114 0.886 31 H 0.041 0.959 32 H 0.131 0.869 33 H 0.134 0.866 34 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.476 6.377 -5.567 8.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.179 4.179 3 C 0.021 3.979 4 N -0.292 5.292 5 C -0.383 4.383 6 H 0.082 0.918 7 C -0.189 4.189 8 N -0.523 5.523 9 Si 0.717 3.283 10 H -0.199 1.199 11 H -0.215 1.215 12 H -0.210 1.210 13 C 0.042 3.958 14 C -0.035 4.035 15 C -0.171 4.171 16 C 0.081 3.919 17 F -0.123 7.123 18 C -0.191 4.191 19 C -0.036 4.036 20 Cl -0.047 7.047 21 C -0.118 4.118 22 H 0.063 0.937 23 H 0.062 0.938 24 H 0.066 0.934 25 H 0.070 0.930 26 H 0.082 0.918 27 H 0.062 0.938 28 H 0.052 0.948 29 H 0.067 0.933 30 H 0.132 0.868 31 H 0.060 0.940 32 H 0.149 0.851 33 H 0.152 0.848 34 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.259 6.329 -5.514 8.693 hybrid contribution 0.652 0.517 0.592 1.021 sum -1.607 6.846 -4.923 8.584 Atomic orbital electron populations 1.21757 0.97694 1.00393 1.00727 1.22064 0.93106 1.00565 1.02204 1.20978 0.84762 0.93647 0.98467 1.43809 0.99541 1.84167 1.01683 1.19127 1.03058 1.25748 0.90369 0.91824 1.25054 1.00615 0.95084 0.98138 1.69975 1.23756 1.18945 1.39651 0.86450 0.81746 0.78453 0.81657 1.19905 1.21539 1.21023 1.20166 1.01554 0.87301 0.86779 1.21223 0.90636 1.00901 0.90728 1.21186 1.01502 0.93105 1.01300 1.17454 0.88136 0.91660 0.94610 1.91464 1.66228 1.82350 1.72219 1.20657 0.94209 1.01235 1.03011 1.20636 0.89215 0.93703 1.00003 1.98347 1.36961 1.78965 1.90470 1.21136 0.98811 0.92104 0.99717 0.93657 0.93805 0.93396 0.92969 0.91765 0.93784 0.94798 0.93330 0.86849 0.94039 0.85064 0.84789 0.84393 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.18 9.91 37.16 0.37 -1.81 16 2 C -0.14 -2.58 6.26 -26.73 -0.17 -2.75 16 3 C 0.15 2.91 5.67 -4.04 -0.02 2.89 16 4 N -0.57 -13.09 2.43 -174.61 -0.42 -13.52 16 5 C -0.25 -6.43 9.48 -15.06 -0.14 -6.57 16 6 H 0.06 1.65 7.93 -52.49 -0.42 1.24 16 7 C 0.01 0.29 4.94 -17.43 -0.09 0.21 16 8 N -0.88 -23.35 11.34 55.49 0.63 -22.72 16 9 Si 0.89 20.48 29.61 -169.99 -5.03 15.44 16 10 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 11 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 12 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 13 C 0.17 3.59 5.42 -5.19 -0.03 3.57 16 14 C -0.03 -0.59 5.46 -104.64 -0.57 -1.16 16 15 C -0.15 -2.58 9.68 -39.51 -0.38 -2.96 16 16 C 0.10 1.64 7.30 -39.42 -0.29 1.36 16 17 F -0.14 -2.26 17.27 2.25 0.04 -2.22 16 18 C -0.17 -2.69 9.81 -39.48 -0.39 -3.08 16 19 C -0.01 -0.15 6.32 -39.51 -0.25 -0.40 16 20 Cl -0.08 -1.18 28.96 -51.86 -1.50 -2.68 16 21 C -0.10 -1.86 9.48 -39.54 -0.37 -2.24 16 22 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 23 H 0.04 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.05 1.00 8.14 -51.93 -0.42 0.58 16 26 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 27 H 0.04 0.87 8.04 -51.93 -0.42 0.46 16 28 H 0.03 0.61 8.08 -51.93 -0.42 0.19 16 29 H 0.26 6.60 8.31 -40.82 -0.34 6.26 16 30 H 0.11 2.74 5.28 -51.93 -0.27 2.46 16 31 H 0.04 0.83 8.01 -51.93 -0.42 0.42 16 32 H 0.13 2.05 8.06 -52.48 -0.42 1.63 16 33 H 0.13 1.82 8.06 -52.49 -0.42 1.39 16 34 H 0.14 2.82 8.06 -52.48 -0.42 2.40 16 LS Contribution 311.19 15.07 4.69 4.69 Total: -1.00 -25.41 311.19 -8.40 -33.80 By element: Atomic # 1 Polarization: 4.61 SS G_CDS: -4.46 Total: 0.15 kcal Atomic # 6 Polarization: -10.62 SS G_CDS: -2.33 Total: -12.95 kcal Atomic # 7 Polarization: -36.44 SS G_CDS: 0.20 Total: -36.24 kcal Atomic # 9 Polarization: -2.26 SS G_CDS: 0.04 Total: -2.22 kcal Atomic # 14 Polarization: 20.48 SS G_CDS: -5.03 Total: 15.44 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.50 Total: -2.68 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -25.41 -8.40 -33.80 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000362509830.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.992 kcal (2) G-P(sol) polarization free energy of solvation -25.409 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.804 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds