Wall clock time and date at job start Mon Mar 30 2020 01:24:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46501 * 109.47168 * 2 1 4 4 C 1.36934 * 120.00156 * 275.04138 * 3 2 1 5 5 H 1.07997 * 120.00152 * 37.93263 * 4 3 2 6 6 C 1.38813 * 119.99954 * 217.92861 * 4 3 2 7 7 N 1.31617 * 120.00272 * 21.29236 * 6 4 3 8 8 Si 1.86804 * 119.99826 * 201.29033 * 6 4 3 9 9 H 1.48500 * 109.47370 * 90.00298 * 8 6 4 10 10 H 1.48504 * 109.47050 * 210.00154 * 8 6 4 11 11 H 1.48503 * 109.47122 * 330.00025 * 8 6 4 12 12 C 1.46500 * 119.99840 * 95.31575 * 3 2 1 13 13 C 1.53001 * 109.47352 * 269.72310 * 12 3 2 14 14 C 1.50702 * 109.47418 * 179.97438 * 13 12 3 15 15 C 1.38247 * 119.98241 * 264.73328 * 14 13 12 16 16 C 1.38183 * 120.03915 * 179.72567 * 15 14 13 17 17 C 1.38496 * 119.99817 * 0.54376 * 16 15 14 18 18 F 1.35098 * 120.01683 * 179.74973 * 17 16 15 19 19 C 1.38414 * 119.95956 * 359.72804 * 17 16 15 20 20 C 1.38337 * 119.96628 * 359.97438 * 19 17 16 21 21 Cl 1.73600 * 120.00132 * 179.97438 * 20 19 17 22 22 H 1.08998 * 109.47070 * 300.00140 * 1 2 3 23 23 H 1.09002 * 109.46504 * 59.99996 * 1 2 3 24 24 H 1.08994 * 109.46816 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.47598 * 240.00390 * 2 1 3 26 26 H 1.08998 * 109.47161 * 119.99713 * 2 1 3 27 27 H 0.96996 * 120.00181 * 179.97438 * 7 6 4 28 28 H 1.09002 * 109.47459 * 29.72499 * 12 3 2 29 29 H 1.09007 * 109.46997 * 149.72760 * 12 3 2 30 30 H 1.08997 * 109.47282 * 300.00088 * 13 12 3 31 31 H 1.09007 * 109.46703 * 60.00269 * 13 12 3 32 32 H 1.08003 * 119.97801 * 359.97438 * 15 14 13 33 33 H 1.08001 * 120.00130 * 180.27037 * 16 15 14 34 34 H 1.07997 * 120.01413 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1483 2.0615 -1.1813 5 1 1.4161 1.9292 -1.9640 6 6 3.2212 2.9213 -1.3726 7 7 4.3100 2.7870 -0.6454 8 14 3.1197 4.2688 -2.6624 9 1 2.5624 5.5007 -2.0484 10 1 4.4783 4.5506 -3.1918 11 1 2.2380 3.8263 -3.7723 12 6 2.3733 2.0326 1.2633 13 6 1.1445 2.7440 1.8333 14 6 1.5095 3.4135 3.1331 15 6 1.2759 2.7671 4.3327 16 6 1.6153 3.3776 5.5249 17 6 2.1795 4.6424 5.5192 18 9 2.5068 5.2417 6.6849 19 6 2.4082 5.2919 4.3185 20 6 2.0735 4.6767 3.1255 21 17 2.3593 5.4907 1.6190 22 1 -0.3633 0.5138 0.8900 23 1 -0.3632 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 1.8934 -0.5138 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 5.0598 3.3876 -0.7794 28 1 2.7211 1.2826 1.9737 29 1 3.1652 2.7606 1.0867 30 1 0.7968 3.4940 1.1229 31 1 0.3526 2.0159 2.0098 32 1 0.8316 1.7828 4.3376 33 1 1.4366 2.8703 6.4615 34 1 2.8485 6.2780 4.3130 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000428449399.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:24:44 Heat of formation + Delta-G solvation = -18.661824 kcal Electronic energy + Delta-G solvation = -18698.605023 eV Core-core repulsion = 15572.051820 eV Total energy + Delta-G solvation = -3126.553204 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -48.84501 -39.14659 -36.10730 -36.02340 -32.53693 -31.82538 -30.79480 -29.10791 -27.20132 -24.35432 -22.95888 -22.67556 -20.81357 -20.06943 -17.67021 -16.70643 -16.43821 -15.56061 -15.37047 -14.91048 -14.39657 -13.98301 -13.80703 -13.64397 -13.47097 -13.03475 -12.54731 -12.32610 -11.94217 -11.69480 -11.33694 -11.13482 -11.11516 -10.99765 -10.79801 -10.72109 -10.44802 -10.32922 -10.01298 -9.65399 -9.49763 -8.82333 -8.43857 -8.28470 -6.52932 -5.75022 -3.33799 1.17068 1.23245 2.45429 3.36117 3.44276 3.45374 3.59892 4.34656 4.49507 4.81956 4.94744 5.06750 5.32727 5.38115 5.56894 5.69340 5.93174 6.00654 6.09306 6.11320 6.23422 6.34553 6.41235 6.49992 6.55760 6.63845 6.73660 6.89232 6.92967 7.13011 7.20867 7.74766 7.86594 8.55882 9.22747 9.84900 10.43421 11.23829 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.018971 B = 0.007041 C = 0.005534 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1475.554029 B = 3976.035561 C = 5058.049658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.140 3.860 3 N -0.581 5.581 4 C -0.262 4.262 5 H 0.058 0.942 6 C 0.024 3.976 7 N -0.879 5.879 8 Si 0.883 3.117 9 H -0.285 1.285 10 H -0.291 1.291 11 H -0.277 1.277 12 C 0.153 3.847 13 C -0.108 4.108 14 C -0.058 4.058 15 C -0.086 4.086 16 C -0.149 4.149 17 C 0.088 3.912 18 F -0.142 7.142 19 C -0.146 4.146 20 C -0.011 4.011 21 Cl -0.038 7.038 22 H 0.043 0.957 23 H 0.049 0.951 24 H 0.035 0.965 25 H 0.043 0.957 26 H 0.032 0.968 27 H 0.254 0.746 28 H 0.021 0.979 29 H 0.104 0.896 30 H 0.080 0.920 31 H 0.060 0.940 32 H 0.138 0.862 33 H 0.135 0.865 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.390 1.675 10.402 11.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.013 3.987 3 N -0.301 5.301 4 C -0.391 4.391 5 H 0.076 0.924 6 C -0.178 4.178 7 N -0.521 5.521 8 Si 0.713 3.287 9 H -0.212 1.212 10 H -0.217 1.217 11 H -0.202 1.202 12 C 0.026 3.974 13 C -0.148 4.148 14 C -0.060 4.060 15 C -0.104 4.104 16 C -0.168 4.168 17 C 0.068 3.932 18 F -0.120 7.120 19 C -0.166 4.166 20 C -0.038 4.038 21 Cl -0.009 7.009 22 H 0.062 0.938 23 H 0.068 0.932 24 H 0.054 0.946 25 H 0.062 0.938 26 H 0.051 0.949 27 H 0.064 0.936 28 H 0.039 0.961 29 H 0.122 0.878 30 H 0.098 0.902 31 H 0.079 0.921 32 H 0.156 0.844 33 H 0.153 0.847 34 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -5.159 1.826 10.258 11.627 hybrid contribution 0.056 1.040 -0.467 1.141 sum -5.103 2.866 9.791 11.407 Atomic orbital electron populations 1.22374 1.00156 0.98880 1.01183 1.20859 0.91672 0.87421 0.98716 1.43755 1.75759 1.08112 1.02444 1.18945 1.04508 1.21698 0.93990 0.92392 1.25074 0.94207 1.00827 0.97648 1.69966 1.03043 1.37124 1.41973 0.86592 0.77006 0.83183 0.81941 1.21161 1.21717 1.20219 1.20949 0.94432 0.96504 0.85530 1.21601 1.02092 0.99941 0.91181 1.20240 0.96248 0.92194 0.97344 1.20888 0.99251 0.99956 0.90301 1.21143 1.01688 0.94146 0.99840 1.17371 1.02194 0.92722 0.80872 1.91478 1.90784 1.83545 1.46232 1.20919 1.03937 1.01692 0.90047 1.20634 1.01421 0.94056 0.87692 1.98432 1.94216 1.78281 1.29953 0.93793 0.93213 0.94641 0.93817 0.94911 0.93566 0.96051 0.87839 0.90186 0.92142 0.84408 0.84695 0.84245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.93 10.21 37.16 0.38 -2.55 16 2 C 0.14 2.88 6.44 -4.04 -0.03 2.85 16 3 N -0.58 -13.92 2.43 -173.24 -0.42 -14.34 16 4 C -0.26 -6.93 9.45 -15.06 -0.14 -7.07 16 5 H 0.06 1.56 7.92 -52.49 -0.42 1.14 16 6 C 0.02 0.63 4.96 -17.43 -0.09 0.55 16 7 N -0.88 -24.51 11.47 55.49 0.64 -23.87 16 8 Si 0.88 21.35 29.60 -169.99 -5.03 16.31 16 9 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 10 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 11 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 12 C 0.15 3.42 5.32 -4.04 -0.02 3.40 16 13 C -0.11 -2.05 5.18 -27.88 -0.14 -2.20 16 14 C -0.06 -0.98 5.14 -104.58 -0.54 -1.51 16 15 C -0.09 -1.19 9.67 -39.60 -0.38 -1.57 16 16 C -0.15 -1.91 10.03 -39.51 -0.40 -2.31 16 17 C 0.09 1.23 7.30 -39.42 -0.29 0.95 16 18 F -0.14 -1.95 17.27 2.25 0.04 -1.91 16 19 C -0.15 -2.18 9.81 -39.48 -0.39 -2.57 16 20 C -0.01 -0.18 6.31 -39.51 -0.25 -0.43 16 21 Cl -0.04 -0.71 27.16 -51.86 -1.41 -2.12 16 22 H 0.04 0.74 6.66 -51.93 -0.35 0.40 16 23 H 0.05 0.93 8.14 -51.93 -0.42 0.50 16 24 H 0.03 0.53 8.14 -51.93 -0.42 0.11 16 25 H 0.04 0.93 8.08 -51.93 -0.42 0.51 16 26 H 0.03 0.63 7.83 -51.93 -0.41 0.22 16 27 H 0.25 6.93 8.31 -40.82 -0.34 6.59 16 28 H 0.02 0.46 7.85 -51.93 -0.41 0.06 16 29 H 0.10 2.61 5.28 -51.93 -0.27 2.34 16 30 H 0.08 1.66 7.12 -51.93 -0.37 1.29 16 31 H 0.06 1.06 6.56 -51.93 -0.34 0.72 16 32 H 0.14 1.61 8.06 -52.48 -0.42 1.19 16 33 H 0.14 1.36 8.06 -52.49 -0.42 0.94 16 34 H 0.14 1.84 8.06 -52.49 -0.42 1.42 16 LS Contribution 305.14 15.07 4.60 4.60 Total: -1.00 -27.64 305.14 -8.10 -35.74 By element: Atomic # 1 Polarization: 2.29 SS G_CDS: -4.23 Total: -1.94 kcal Atomic # 6 Polarization: -10.18 SS G_CDS: -2.28 Total: -12.46 kcal Atomic # 7 Polarization: -38.43 SS G_CDS: 0.21 Total: -38.22 kcal Atomic # 9 Polarization: -1.95 SS G_CDS: 0.04 Total: -1.91 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.03 Total: 16.31 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.41 Total: -2.12 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -27.64 -8.10 -35.74 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000428449399.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.079 kcal (2) G-P(sol) polarization free energy of solvation -27.641 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.740 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds