Wall clock time and date at job start Mon Mar 30 2020 01:25:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46895 * 109.47255 * 2 1 4 4 C 1.46899 * 111.00179 * 165.12285 * 3 2 1 5 5 C 1.52999 * 109.47207 * 199.68007 * 4 3 2 6 6 C 1.50705 * 109.47093 * 178.76281 * 5 4 3 7 7 H 1.08003 * 119.99865 * 359.97438 * 6 5 4 8 8 C 1.37874 * 119.99858 * 180.02562 * 6 5 4 9 9 N 1.31517 * 119.99882 * 179.97438 * 8 6 5 10 10 Si 1.86803 * 120.00212 * 0.02562 * 8 6 5 11 11 H 1.48495 * 109.47348 * 89.99753 * 10 8 6 12 12 H 1.48501 * 109.46917 * 209.99999 * 10 8 6 13 13 H 1.48503 * 109.46760 * 329.99681 * 10 8 6 14 14 C 1.39919 * 111.00184 * 289.07585 * 3 2 1 15 15 C 1.38814 * 120.06432 * 295.76971 * 14 3 2 16 16 C 1.38159 * 119.96137 * 179.76318 * 15 14 3 17 17 C 1.38373 * 120.09523 * 0.50894 * 16 15 14 18 18 Cl 1.73602 * 119.93260 * 179.76364 * 17 16 15 19 19 C 1.38381 * 120.13760 * 359.74694 * 17 16 15 20 20 C 1.38283 * 120.03228 * 359.97438 * 19 17 16 21 21 F 1.35107 * 120.04619 * 179.97438 * 20 19 17 22 22 H 1.09000 * 109.46917 * 305.18845 * 1 2 3 23 23 H 1.08995 * 109.46817 * 65.18615 * 1 2 3 24 24 H 1.09002 * 109.47231 * 185.18699 * 1 2 3 25 25 H 1.09007 * 109.46886 * 239.99785 * 2 1 3 26 26 H 1.09001 * 109.47458 * 120.00274 * 2 1 3 27 27 H 1.09005 * 109.47395 * 79.67880 * 4 3 2 28 28 H 1.08994 * 109.47126 * 319.68236 * 4 3 2 29 29 H 1.09007 * 109.47190 * 298.75774 * 5 4 3 30 30 H 1.08991 * 109.47156 * 58.76252 * 5 4 3 31 31 H 0.96996 * 119.99836 * 180.02562 * 9 8 6 32 32 H 1.07998 * 120.02450 * 0.02562 * 15 14 3 33 33 H 1.07997 * 119.95817 * 180.25473 * 16 15 14 34 34 H 1.07999 * 119.98309 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0197 1.3849 0.0000 4 6 3.4448 1.4395 0.3521 5 6 3.8012 2.8523 0.8189 6 6 5.2561 2.9005 1.2089 7 1 5.8655 2.0121 1.1320 8 6 5.8088 4.0783 1.6649 9 7 7.0784 4.1203 2.0058 10 14 4.7543 5.6143 1.8000 11 1 4.1350 5.6726 3.1484 12 1 5.6013 6.8161 1.5919 13 1 3.6882 5.5751 0.7669 14 6 1.7844 2.0000 -1.2345 15 6 2.4112 1.5256 -2.3786 16 6 2.1735 2.1315 -3.5973 17 6 1.3196 3.2173 -3.6775 18 17 1.0287 3.9793 -5.2100 19 6 0.6967 3.6970 -2.5387 20 6 0.9262 3.0911 -1.3170 21 9 0.3186 3.5595 -0.2049 22 1 -0.3633 0.5922 0.8399 23 1 -0.3633 0.4313 -0.9328 24 1 -0.3634 -1.0235 0.0929 25 1 1.8933 -0.5139 -0.8900 26 1 1.8934 -0.5139 0.8899 27 1 4.0449 1.1831 -0.5210 28 1 3.6484 0.7298 1.1539 29 1 3.6184 3.5593 0.0095 30 1 3.1856 3.1170 1.6785 31 1 7.4672 4.9488 2.3270 32 1 3.0810 0.6806 -2.3169 33 1 2.6580 1.7597 -4.4880 34 1 0.0304 4.5444 -2.6042 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000440623984.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:25:07 Heat of formation + Delta-G solvation = -25.583745 kcal Electronic energy + Delta-G solvation = -18788.519969 eV Core-core repulsion = 15661.666609 eV Total energy + Delta-G solvation = -3126.853361 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.60449 -39.82121 -37.36825 -36.08873 -33.24846 -31.43199 -30.78803 -30.25943 -28.08912 -24.44258 -23.58055 -22.61031 -21.00328 -20.13510 -17.87333 -16.92487 -16.64889 -16.19577 -15.62015 -15.16824 -14.71847 -14.27725 -14.14283 -13.79354 -13.53398 -13.24188 -13.08695 -12.77702 -12.47291 -12.15048 -11.81315 -11.61667 -11.44505 -11.21711 -11.12101 -10.97068 -10.91677 -10.22571 -9.84086 -9.78910 -9.24559 -8.98172 -8.55081 -8.45366 -8.21456 -6.05480 -4.04006 0.94598 1.09684 1.94324 3.34045 3.39056 3.40829 3.48140 3.91463 4.36485 4.47012 4.67071 4.90205 5.03566 5.17464 5.26155 5.29842 5.41847 5.54783 5.61455 5.82197 5.91261 5.93336 6.01605 6.06233 6.09485 6.20420 6.32945 6.55593 6.68791 7.02415 7.30094 7.44121 7.57701 7.80514 8.49840 8.97364 9.57466 11.07595 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.015413 B = 0.006629 C = 0.005528 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1816.268090 B = 4222.711454 C = 5064.236855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.055 3.945 3 N -0.510 5.510 4 C 0.072 3.928 5 C -0.005 4.005 6 C -0.521 4.521 7 H 0.071 0.929 8 C 0.070 3.930 9 N -0.903 5.903 10 Si 0.877 3.123 11 H -0.276 1.276 12 H -0.288 1.288 13 H -0.264 1.264 14 C 0.086 3.914 15 C -0.109 4.109 16 C -0.112 4.112 17 C -0.017 4.017 18 Cl -0.067 7.067 19 C -0.148 4.148 20 C 0.136 3.864 21 F -0.120 7.120 22 H 0.065 0.935 23 H 0.048 0.952 24 H 0.057 0.943 25 H 0.036 0.964 26 H 0.081 0.919 27 H 0.037 0.963 28 H 0.075 0.925 29 H 0.012 0.988 30 H 0.022 0.978 31 H 0.263 0.737 32 H 0.140 0.860 33 H 0.137 0.863 34 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.317 -5.692 -11.493 19.222 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.071 4.071 3 N -0.232 5.232 4 C -0.052 4.052 5 C -0.043 4.043 6 C -0.560 4.560 7 H 0.089 0.911 8 C -0.131 4.131 9 N -0.542 5.542 10 Si 0.705 3.295 11 H -0.201 1.201 12 H -0.214 1.214 13 H -0.189 1.189 14 C -0.010 4.010 15 C -0.129 4.129 16 C -0.131 4.131 17 C -0.044 4.044 18 Cl -0.038 7.038 19 C -0.168 4.168 20 C 0.115 3.885 21 F -0.098 7.098 22 H 0.084 0.916 23 H 0.067 0.933 24 H 0.076 0.924 25 H 0.054 0.946 26 H 0.100 0.900 27 H 0.055 0.945 28 H 0.093 0.907 29 H 0.031 0.969 30 H 0.040 0.960 31 H 0.073 0.927 32 H 0.157 0.843 33 H 0.155 0.845 34 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -14.476 -5.255 -11.121 18.996 hybrid contribution -0.012 0.692 -0.379 0.789 sum -14.488 -4.563 -11.500 19.052 Atomic orbital electron populations 1.21777 0.95115 1.01321 1.02336 1.22193 0.95997 0.87714 1.01235 1.59848 1.21362 1.16834 1.25130 1.22366 0.81882 1.01605 0.99367 1.19517 0.97012 0.91349 0.96396 1.21020 0.93275 0.97876 1.43816 0.91062 1.24955 0.94785 0.98786 0.94580 1.69908 1.12086 1.27429 1.44731 0.86803 0.80745 0.82756 0.79244 1.20134 1.21408 1.18896 1.18947 0.96293 0.95183 0.90532 1.21505 0.99191 1.00580 0.91643 1.20917 0.98273 0.95253 0.98681 1.20500 1.00521 0.96645 0.86724 1.98366 1.95275 1.81148 1.29025 1.20880 1.03384 1.02386 0.90130 1.17350 0.94881 0.93879 0.82400 1.91529 1.80661 1.87230 1.50359 0.91584 0.93321 0.92354 0.94555 0.90016 0.94473 0.90662 0.96925 0.96010 0.92699 0.84276 0.84474 0.83727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.74 9.88 37.16 0.37 -1.37 16 2 C 0.05 0.72 5.60 -3.83 -0.02 0.70 16 3 N -0.51 -8.62 4.24 -171.01 -0.72 -9.34 16 4 C 0.07 1.42 4.85 -3.82 -0.02 1.40 16 5 C 0.00 -0.12 4.13 -27.88 -0.12 -0.23 16 6 C -0.52 -14.86 9.66 -34.44 -0.33 -15.20 16 7 H 0.07 2.15 7.99 -52.48 -0.42 1.73 16 8 C 0.07 2.07 5.47 -17.82 -0.10 1.98 16 9 N -0.90 -27.95 13.96 55.43 0.77 -27.18 16 10 Si 0.88 22.43 27.47 -169.99 -4.67 17.76 16 11 H -0.28 -6.93 7.11 56.52 0.40 -6.53 16 12 H -0.29 -7.25 7.11 56.52 0.40 -6.85 16 13 H -0.26 -6.66 6.54 56.52 0.37 -6.29 16 14 C 0.09 1.38 3.29 -83.65 -0.28 1.11 16 15 C -0.11 -1.50 8.23 -39.40 -0.32 -1.83 16 16 C -0.11 -1.39 9.82 -39.56 -0.39 -1.77 16 17 C -0.02 -0.22 6.32 -39.48 -0.25 -0.47 16 18 Cl -0.07 -0.76 28.95 -51.86 -1.50 -2.26 16 19 C -0.15 -2.04 9.80 -39.51 -0.39 -2.43 16 20 C 0.14 2.20 7.31 -39.26 -0.29 1.91 16 21 F -0.12 -2.12 17.08 2.25 0.04 -2.08 16 22 H 0.07 0.85 8.14 -51.93 -0.42 0.42 16 23 H 0.05 0.59 7.70 -51.93 -0.40 0.19 16 24 H 0.06 0.56 8.14 -51.93 -0.42 0.13 16 25 H 0.04 0.43 7.07 -51.92 -0.37 0.07 16 26 H 0.08 1.03 7.71 -51.93 -0.40 0.63 16 27 H 0.04 0.71 6.69 -51.93 -0.35 0.36 16 28 H 0.07 1.43 7.66 -51.93 -0.40 1.03 16 29 H 0.01 0.32 6.81 -51.93 -0.35 -0.04 16 30 H 0.02 0.55 7.57 -51.93 -0.39 0.15 16 31 H 0.26 7.65 8.31 -40.82 -0.34 7.31 16 32 H 0.14 1.72 7.07 -52.49 -0.37 1.35 16 33 H 0.14 1.37 8.06 -52.49 -0.42 0.95 16 34 H 0.14 1.72 8.06 -52.49 -0.42 1.30 16 LS Contribution 303.79 15.07 4.58 4.58 Total: -1.00 -30.87 303.79 -7.94 -38.81 By element: Atomic # 1 Polarization: 0.22 SS G_CDS: -4.31 Total: -4.09 kcal Atomic # 6 Polarization: -14.08 SS G_CDS: -2.13 Total: -16.21 kcal Atomic # 7 Polarization: -36.56 SS G_CDS: 0.05 Total: -36.52 kcal Atomic # 9 Polarization: -2.12 SS G_CDS: 0.04 Total: -2.08 kcal Atomic # 14 Polarization: 22.43 SS G_CDS: -4.67 Total: 17.76 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.50 Total: -2.26 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -30.87 -7.94 -38.81 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000440623984.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.227 kcal (2) G-P(sol) polarization free energy of solvation -30.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.642 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.811 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds