Wall clock time and date at job start Mon Mar 30 2020 01:15:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46503 * 109.46907 * 230.63466 * 3 2 1 5 5 C 1.36907 * 120.00166 * 271.86221 * 4 3 2 6 6 H 1.08000 * 120.00286 * 192.93358 * 5 4 3 7 7 C 1.39022 * 119.99910 * 12.94055 * 5 4 3 8 8 N 1.31387 * 119.99919 * 13.89980 * 7 5 4 9 9 Si 1.86796 * 120.00009 * 193.90138 * 7 5 4 10 10 H 1.48498 * 109.47207 * 60.00295 * 9 7 5 11 11 H 1.48506 * 109.47203 * 180.02562 * 9 7 5 12 12 H 1.48497 * 109.47458 * 299.99837 * 9 7 5 13 13 C 1.34779 * 119.99831 * 91.86576 * 4 3 2 14 14 O 1.21615 * 119.99708 * 184.32726 * 13 4 3 15 15 C 1.47585 * 120.00165 * 4.60994 * 13 4 3 16 16 C 1.41650 * 120.10078 * 308.12755 * 15 13 4 17 17 C 1.35739 * 119.54951 * 179.69274 * 16 15 13 18 18 C 1.40861 * 119.54095 * 0.59816 * 17 16 15 19 19 N 1.32518 * 133.32626 * 179.69883 * 18 17 16 20 20 N 1.28527 * 110.24969 * 179.97438 * 19 18 17 21 21 N 1.28982 * 110.84321 * 359.97438 * 20 19 18 22 22 N 1.36913 * 120.04303 * 359.67530 * 18 17 16 23 23 C 1.35517 * 120.86201 * 0.02562 * 22 18 17 24 24 H 4.40635 * 5.51474 * 179.97438 * 4 1 2 25 25 H 1.09001 * 109.47325 * 110.64037 * 3 2 1 26 26 H 1.09001 * 109.47396 * 350.63317 * 3 2 1 27 27 H 0.96994 * 119.99960 * 179.97438 * 8 7 5 28 28 H 1.07996 * 120.22863 * 359.97438 * 16 15 13 29 29 H 1.08000 * 120.23180 * 180.27160 * 17 16 15 30 30 H 1.08011 * 119.89358 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1339 0.8770 1.0679 5 6 3.3251 2.2107 0.8252 6 1 3.8748 2.8148 1.5318 7 6 2.8115 2.7875 -0.3308 8 7 1.9226 2.1395 -1.0492 9 14 3.3852 4.4838 -0.8625 10 1 4.8518 4.4602 -1.0945 11 1 2.6912 4.8703 -2.1172 12 1 3.0682 5.4698 0.2017 13 6 3.3945 0.3701 2.2892 14 8 3.7238 1.1096 3.1968 15 6 3.2864 -1.0830 2.5236 16 6 2.1067 -1.7759 2.1567 17 6 2.0217 -3.1135 2.3716 18 6 3.1029 -3.7912 2.9680 19 7 3.3102 -5.0568 3.3017 20 7 4.4745 -5.1930 3.8287 21 7 5.0924 -4.0618 3.8752 22 7 4.2326 -3.1029 3.3209 23 6 4.3296 -1.7685 3.1049 24 1 -1.0501 0.0000 -0.0003 25 1 3.0092 0.3631 -0.9617 26 1 3.0098 -1.0131 0.1673 27 1 1.5640 2.5421 -1.8555 28 1 1.2822 -1.2445 1.7048 29 1 1.1291 -3.6535 2.0921 30 1 5.2280 -1.2410 3.3899 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490963283.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:15:25 Heat of formation + Delta-G solvation = 196.300919 kcal Electronic energy + Delta-G solvation = -19939.287941 eV Core-core repulsion = 16740.868689 eV Total energy + Delta-G solvation = -3198.419252 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -43.25523 -39.70352 -37.74244 -35.62260 -34.04239 -32.60374 -31.73104 -31.52209 -30.33951 -26.91462 -25.91769 -24.29240 -24.16917 -22.68702 -20.38857 -18.69835 -18.25558 -17.31309 -16.81957 -16.80603 -16.46167 -15.48412 -14.99400 -14.50902 -14.32248 -14.01461 -13.66148 -13.04331 -12.92398 -12.56555 -12.46713 -12.34313 -11.81011 -11.64698 -11.47236 -11.18297 -10.99317 -10.80417 -10.60976 -9.94802 -9.68447 -9.56944 -9.13797 -8.93421 -8.50236 -8.29218 -6.63915 -4.19062 0.34863 0.56144 1.75295 2.15028 2.87759 3.06423 3.08016 3.09641 3.46520 3.54141 3.69136 3.83877 3.92148 4.11072 4.51611 4.63438 4.75724 4.86803 4.96016 5.25409 5.37948 5.39796 5.68082 5.76061 5.89683 5.98621 6.11778 6.40726 6.55156 6.80446 7.22120 7.60630 8.03878 8.43199 8.54846 8.74160 8.93404 9.45232 10.30354 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.031855 B = 0.005468 C = 0.004906 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 878.784817 B = 5119.344262 C = 5706.448403 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.255 4.255 2 C -0.108 4.108 3 C 0.224 3.776 4 N -0.413 5.413 5 C -0.307 4.307 6 H 0.112 0.888 7 C 0.033 3.967 8 N -0.857 5.857 9 Si 0.935 3.065 10 H -0.270 1.270 11 H -0.282 1.282 12 H -0.270 1.270 13 C 0.474 3.526 14 O -0.572 6.572 15 C -0.101 4.101 16 C -0.037 4.037 17 C -0.103 4.103 18 C 0.242 3.758 19 N -0.333 5.333 20 N -0.016 5.016 21 N -0.121 5.121 22 N -0.294 5.294 23 C 0.133 3.867 24 H 0.202 0.798 25 H 0.121 0.879 26 H 0.062 0.938 27 H 0.276 0.724 28 H 0.169 0.831 29 H 0.168 0.832 30 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.548 -5.192 -0.904 5.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.274 4.274 2 C -0.110 4.110 3 C 0.101 3.899 4 N -0.128 5.128 5 C -0.434 4.434 6 H 0.130 0.870 7 C -0.173 4.173 8 N -0.494 5.494 9 Si 0.761 3.239 10 H -0.195 1.195 11 H -0.207 1.207 12 H -0.195 1.195 13 C 0.261 3.739 14 O -0.457 6.457 15 C -0.110 4.110 16 C -0.062 4.062 17 C -0.126 4.126 18 C -0.011 4.011 19 N -0.194 5.194 20 N -0.009 5.009 21 N -0.104 5.104 22 N -0.072 5.072 23 C 0.003 3.997 24 H 0.219 0.781 25 H 0.139 0.861 26 H 0.079 0.921 27 H 0.087 0.913 28 H 0.186 0.814 29 H 0.185 0.815 30 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges -0.581 -6.044 -0.053 6.072 hybrid contribution -0.513 1.677 -0.737 1.903 sum -1.094 -4.367 -0.790 4.571 Atomic orbital electron populations 1.24340 0.95391 1.05052 1.02585 1.22794 0.94023 0.96134 0.98040 1.18568 0.84770 0.91872 0.94655 1.43683 1.53362 1.08694 1.07067 1.19828 1.33189 0.83788 1.06626 0.86986 1.25440 0.94737 1.00535 0.96561 1.69949 1.24501 1.38586 1.16332 0.85832 0.79071 0.80844 0.78144 1.19518 1.20683 1.19522 1.17170 0.88260 0.84770 0.83658 1.90704 1.54196 1.58889 1.41899 1.20435 0.93446 0.96949 1.00208 1.22101 0.97894 0.93324 0.92929 1.20265 0.97046 0.93795 1.01533 1.23009 0.90127 0.89420 0.98586 1.75098 1.10575 1.12822 1.20917 1.77778 0.99649 1.15747 1.07774 1.82776 1.13382 0.91260 1.22983 1.48713 1.12735 1.09052 1.36700 1.21954 1.01505 0.78584 0.97657 0.78091 0.86144 0.92055 0.91317 0.81379 0.81486 0.79553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.25 -4.35 18.79 29.55 0.56 -3.80 16 2 C -0.11 -2.02 8.60 -37.12 -0.32 -2.34 16 3 C 0.22 4.23 4.75 -6.83 -0.03 4.20 16 4 N -0.41 -8.98 2.58 -119.10 -0.31 -9.29 16 5 C -0.31 -7.37 9.43 -14.99 -0.14 -7.51 16 6 H 0.11 2.83 7.30 -52.49 -0.38 2.44 16 7 C 0.03 0.75 5.13 -17.45 -0.09 0.66 16 8 N -0.86 -19.36 8.55 55.50 0.47 -18.89 16 9 Si 0.94 18.26 29.58 -169.99 -5.03 13.23 16 10 H -0.27 -5.23 7.11 56.52 0.40 -4.83 16 11 H -0.28 -5.44 7.11 56.52 0.40 -5.04 16 12 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 13 C 0.47 9.98 7.14 -12.45 -0.09 9.89 16 14 O -0.57 -14.05 16.68 5.26 0.09 -13.96 16 15 C -0.10 -1.68 4.77 -104.98 -0.50 -2.18 16 16 C -0.04 -0.52 7.68 -39.18 -0.30 -0.82 16 17 C -0.10 -1.32 10.08 -39.48 -0.40 -1.72 16 18 C 0.24 3.77 8.02 -156.26 -1.25 2.52 16 19 N -0.33 -5.65 12.26 31.10 0.38 -5.26 16 20 N -0.02 -0.29 13.35 60.35 0.81 0.52 16 21 N -0.12 -2.09 13.99 60.35 0.84 -1.24 16 22 N -0.29 -4.78 3.92 -11.79 -0.05 -4.82 16 23 C 0.13 2.07 10.94 -16.12 -0.18 1.89 16 24 H 0.20 2.74 7.80 -54.08 -0.42 2.32 16 25 H 0.12 2.44 6.39 -51.93 -0.33 2.10 16 26 H 0.06 0.98 5.86 -51.93 -0.30 0.67 16 27 H 0.28 6.03 8.31 -40.82 -0.34 5.69 16 28 H 0.17 2.43 4.57 -52.49 -0.24 2.19 16 29 H 0.17 1.60 8.06 -52.49 -0.42 1.17 16 30 H 0.19 2.64 8.06 -52.48 -0.42 2.22 16 LS Contribution 273.91 15.07 4.13 4.13 Total: -1.00 -27.81 273.91 -3.07 -30.88 By element: Atomic # 1 Polarization: 5.60 SS G_CDS: -1.66 Total: 3.94 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: -2.75 Total: 0.78 kcal Atomic # 7 Polarization: -41.14 SS G_CDS: 2.15 Total: -38.99 kcal Atomic # 8 Polarization: -14.05 SS G_CDS: 0.09 Total: -13.96 kcal Atomic # 14 Polarization: 18.26 SS G_CDS: -5.03 Total: 13.23 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -27.81 -3.07 -30.88 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490963283.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 227.177 kcal (2) G-P(sol) polarization free energy of solvation -27.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 199.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.876 kcal (6) G-S(sol) free energy of system = (1) + (5) 196.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds