Wall clock time and date at job start Mon Mar 30 2020 01:10:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.47302 * 2 1 4 4 H 1.09002 * 109.46525 * 304.24754 * 3 2 1 5 5 C 1.50695 * 109.46981 * 184.24886 * 3 2 1 6 6 H 1.07995 * 120.00300 * 239.99586 * 5 3 2 7 7 C 1.37878 * 120.00128 * 59.99851 * 5 3 2 8 8 N 1.31518 * 120.00114 * 0.02562 * 7 5 3 9 9 Si 1.86796 * 120.00079 * 179.97438 * 7 5 3 10 10 H 1.48496 * 109.47313 * 0.02562 * 9 7 5 11 11 H 1.48495 * 109.47182 * 120.00197 * 9 7 5 12 12 H 1.48504 * 109.47517 * 240.00195 * 9 7 5 13 13 N 1.46897 * 109.47366 * 64.24497 * 3 2 1 14 14 C 1.46897 * 111.00344 * 205.88844 * 13 3 2 15 15 C 1.50704 * 109.47138 * 174.79579 * 14 13 3 16 16 C 1.38205 * 119.99454 * 260.02408 * 15 14 13 17 17 C 1.38437 * 119.98790 * 180.02562 * 16 15 14 18 18 F 1.35097 * 120.01331 * 179.97438 * 17 16 15 19 19 C 1.38478 * 119.97537 * 0.02562 * 17 16 15 20 20 C 1.38175 * 119.98640 * 359.97314 * 19 17 16 21 21 C 1.38333 * 119.99117 * 80.00091 * 15 14 13 22 22 Cl 1.73601 * 119.98653 * 359.72641 * 21 15 14 23 23 H 1.08998 * 109.47028 * 294.87526 * 1 2 3 24 24 H 1.08998 * 109.47000 * 54.86971 * 1 2 3 25 25 H 1.08998 * 109.47372 * 174.86923 * 1 2 3 26 26 H 1.09000 * 109.47087 * 239.99634 * 2 1 3 27 27 H 1.08999 * 109.46977 * 119.99633 * 2 1 3 28 28 H 0.96997 * 120.00135 * 179.97438 * 8 7 5 29 29 H 1.00907 * 110.99854 * 81.93447 * 13 3 2 30 30 H 1.09004 * 109.46696 * 54.80035 * 14 13 3 31 31 H 1.08997 * 109.47000 * 294.80228 * 14 13 3 32 32 H 1.08000 * 120.00886 * 359.97438 * 16 15 14 33 33 H 1.07996 * 120.00842 * 179.97438 * 19 17 16 34 34 H 1.07995 * 119.99051 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6159 1.9778 -0.8495 5 6 3.5434 1.4437 -0.1053 6 1 4.1391 1.8917 0.6762 7 6 4.1583 0.8730 -1.1994 8 7 3.4329 0.3279 -2.1514 9 14 6.0217 0.8751 -1.3302 10 1 6.6008 1.5453 -0.1383 11 1 6.5147 -0.5239 -1.3992 12 1 6.4311 1.6052 -2.5569 13 7 1.6360 2.1048 1.2474 14 6 1.5389 3.5590 1.0638 15 6 1.0009 4.1894 2.3225 16 6 -0.3333 4.5408 2.4034 17 6 -0.8274 5.1203 3.5595 18 9 -2.1314 5.4644 3.6389 19 6 0.0158 5.3482 4.6341 20 6 1.3496 4.9965 4.5520 21 6 1.8424 4.4159 3.3968 22 17 3.5165 3.9673 3.2972 23 1 -0.3633 0.4323 0.9323 24 1 -0.3633 0.5913 -0.8405 25 1 -0.3634 -1.0235 -0.0919 26 1 1.8934 -0.5139 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 3.8655 -0.0733 -2.9213 29 1 2.2689 1.8767 1.9994 30 1 0.8676 3.7763 0.2330 31 1 2.5273 3.9647 0.8480 32 1 -0.9903 4.3640 1.5646 33 1 -0.3689 5.8007 5.5360 34 1 2.0071 5.1738 5.3902 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000566429115.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:10:19 Heat of formation + Delta-G solvation = -41.023035 kcal Electronic energy + Delta-G solvation = -18394.719349 eV Core-core repulsion = 15267.196490 eV Total energy + Delta-G solvation = -3127.522858 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.93755 -39.29170 -36.24503 -36.16185 -33.17825 -31.59383 -30.55221 -29.82103 -26.68819 -24.60748 -22.84774 -22.58707 -21.16014 -19.51592 -17.30441 -16.87944 -16.52297 -16.37318 -15.65891 -14.87253 -14.47852 -14.12643 -13.74469 -13.66116 -13.27894 -13.01368 -12.70848 -12.37204 -11.97143 -11.76830 -11.39902 -11.27088 -11.10627 -11.07198 -10.87359 -10.66587 -10.54903 -10.16742 -9.61986 -9.59212 -9.06898 -9.01005 -8.47826 -8.39686 -7.32047 -6.01318 -4.13517 0.97930 1.13152 2.26745 3.25007 3.33915 3.37123 3.43450 4.16198 4.38718 4.61881 4.73159 5.03778 5.21026 5.24908 5.57351 5.66201 5.78142 5.80746 5.99746 6.09466 6.34286 6.39868 6.50166 6.53568 6.70295 6.73041 7.10351 7.16359 7.40504 7.56197 7.76748 8.05155 8.10894 8.27947 8.60433 8.98204 9.54186 10.99252 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021650 B = 0.005673 C = 0.004734 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1292.995299 B = 4934.369876 C = 5913.592568 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.106 4.106 3 C 0.215 3.785 4 H 0.033 0.967 5 C -0.543 4.543 6 H 0.056 0.944 7 C 0.068 3.932 8 N -0.885 5.885 9 Si 0.886 3.114 10 H -0.275 1.275 11 H -0.284 1.284 12 H -0.284 1.284 13 N -0.681 5.681 14 C 0.095 3.905 15 C -0.024 4.024 16 C -0.129 4.129 17 C 0.099 3.901 18 F -0.140 7.140 19 C -0.154 4.154 20 C -0.084 4.084 21 C -0.046 4.046 22 Cl -0.053 7.053 23 H 0.046 0.954 24 H 0.036 0.964 25 H 0.024 0.976 26 H 0.091 0.909 27 H 0.030 0.970 28 H 0.261 0.739 29 H 0.332 0.668 30 H 0.076 0.924 31 H 0.052 0.948 32 H 0.144 0.856 33 H 0.139 0.861 34 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.387 8.797 10.938 15.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.144 4.144 3 C 0.108 3.892 4 H 0.051 0.949 5 C -0.582 4.582 6 H 0.074 0.926 7 C -0.134 4.134 8 N -0.523 5.523 9 Si 0.714 3.286 10 H -0.199 1.199 11 H -0.210 1.210 12 H -0.210 1.210 13 N -0.311 5.311 14 C -0.035 4.035 15 C -0.026 4.026 16 C -0.148 4.148 17 C 0.080 3.920 18 F -0.118 7.118 19 C -0.174 4.174 20 C -0.103 4.103 21 C -0.074 4.074 22 Cl -0.024 7.024 23 H 0.065 0.935 24 H 0.056 0.944 25 H 0.043 0.957 26 H 0.109 0.891 27 H 0.049 0.951 28 H 0.071 0.929 29 H 0.149 0.851 30 H 0.094 0.906 31 H 0.070 0.930 32 H 0.162 0.838 33 H 0.157 0.843 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -5.941 8.555 10.621 14.875 hybrid contribution 1.916 0.218 -0.156 1.935 sum -4.024 8.772 10.465 14.236 Atomic orbital electron populations 1.21691 0.98981 0.98326 1.00352 1.21498 0.92087 0.99085 1.01758 1.19189 0.92927 0.91181 0.85931 0.94882 1.21893 0.92579 1.37882 1.05850 0.92584 1.24915 0.97869 0.94995 0.95668 1.69884 1.34766 1.38153 1.09538 0.86630 0.86226 0.77757 0.77943 1.19933 1.20963 1.21039 1.61012 1.55646 1.04071 1.10342 1.20856 0.99859 0.91108 0.91660 1.19923 0.91877 0.94891 0.95866 1.21023 0.95527 1.00460 0.97802 1.17734 0.78433 1.00203 0.95639 1.91495 1.33538 1.90070 1.96729 1.20968 0.93305 1.04305 0.98782 1.20835 0.94919 0.97725 0.96807 1.20952 0.87054 1.03365 0.96022 1.98406 1.14697 1.91096 1.98164 0.93494 0.94441 0.95664 0.89064 0.95066 0.92940 0.85148 0.90574 0.93003 0.83848 0.84330 0.84308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.76 9.73 37.16 0.36 -2.40 16 2 C -0.11 -2.49 5.45 -26.73 -0.15 -2.63 16 3 C 0.22 5.15 1.98 -68.87 -0.14 5.02 16 4 H 0.03 0.87 7.70 -51.93 -0.40 0.47 16 5 C -0.54 -14.24 8.47 -34.44 -0.29 -14.53 16 6 H 0.06 1.47 7.73 -52.49 -0.41 1.07 16 7 C 0.07 1.83 5.29 -17.82 -0.09 1.73 16 8 N -0.88 -24.57 11.30 55.43 0.63 -23.95 16 9 Si 0.89 20.94 29.54 -169.99 -5.02 15.92 16 10 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 11 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 12 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 13 N -0.68 -13.84 5.72 -109.22 -0.62 -14.46 16 14 C 0.09 1.70 5.08 -4.98 -0.03 1.67 16 15 C -0.02 -0.37 5.44 -104.60 -0.57 -0.94 16 16 C -0.13 -1.77 9.65 -39.52 -0.38 -2.15 16 17 C 0.10 1.26 7.30 -39.42 -0.29 0.98 16 18 F -0.14 -1.80 17.27 2.25 0.04 -1.76 16 19 C -0.15 -1.71 10.03 -39.52 -0.40 -2.11 16 20 C -0.08 -0.97 9.83 -39.55 -0.39 -1.36 16 21 C -0.05 -0.66 6.31 -39.50 -0.25 -0.91 16 22 Cl -0.05 -0.80 26.72 -51.86 -1.39 -2.18 16 23 H 0.05 0.91 7.88 -51.93 -0.41 0.50 16 24 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 25 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 26 H 0.09 2.40 5.97 -51.93 -0.31 2.09 16 27 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 28 H 0.26 6.93 8.31 -40.82 -0.34 6.59 16 29 H 0.33 6.85 7.62 -39.29 -0.30 6.55 16 30 H 0.08 1.34 7.79 -51.93 -0.40 0.94 16 31 H 0.05 1.00 7.33 -51.93 -0.38 0.62 16 32 H 0.14 1.85 8.04 -52.49 -0.42 1.43 16 33 H 0.14 1.17 8.06 -52.49 -0.42 0.75 16 34 H 0.14 1.27 8.06 -52.49 -0.42 0.85 16 LS Contribution 305.33 15.07 4.60 4.60 Total: -1.00 -26.95 305.33 -8.65 -35.59 By element: Atomic # 1 Polarization: 8.15 SS G_CDS: -4.28 Total: 3.87 kcal Atomic # 6 Polarization: -15.03 SS G_CDS: -2.60 Total: -17.63 kcal Atomic # 7 Polarization: -38.41 SS G_CDS: 0.00 Total: -38.41 kcal Atomic # 9 Polarization: -1.80 SS G_CDS: 0.04 Total: -1.76 kcal Atomic # 14 Polarization: 20.94 SS G_CDS: -5.02 Total: 15.92 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.39 Total: -2.18 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -26.95 -8.65 -35.59 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000566429115.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.429 kcal (2) G-P(sol) polarization free energy of solvation -26.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.594 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds