Wall clock time and date at job start Mon Mar 30 2020 00:54:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46499 * 109.46869 * 22.75539 * 3 2 1 5 5 C 1.36957 * 120.00284 * 264.69694 * 4 3 2 6 6 H 1.07995 * 120.00617 * 190.00999 * 5 4 3 7 7 C 1.38963 * 119.99481 * 10.01361 * 5 4 3 8 8 N 1.31420 * 120.00387 * 30.57707 * 7 5 4 9 9 Si 1.86799 * 119.99607 * 210.57927 * 7 5 4 10 10 H 1.48502 * 109.47439 * 94.99466 * 9 7 5 11 11 H 1.48502 * 109.47207 * 214.99793 * 9 7 5 12 12 H 1.48503 * 109.47458 * 334.99192 * 9 7 5 13 13 C 1.34779 * 120.00104 * 84.70386 * 4 3 2 14 14 O 1.21735 * 120.00096 * 4.58813 * 13 4 3 15 15 C 1.46580 * 120.00085 * 184.59209 * 13 4 3 16 16 C 1.40391 * 126.57160 * 310.00300 * 15 13 4 17 17 N 1.30986 * 108.77873 * 180.02562 * 16 15 13 18 18 N 1.39904 * 109.58155 * 0.02562 * 17 16 15 19 19 N 1.40017 * 132.51185 * 180.02562 * 18 17 16 20 20 C 1.30845 * 120.65964 * 179.97438 * 19 18 17 21 21 C 1.39721 * 120.97098 * 0.25417 * 20 19 18 22 22 C 1.36600 * 119.93813 * 359.48663 * 21 20 19 23 23 C 1.36778 * 107.88275 * 359.97438 * 18 17 16 24 24 H 1.08991 * 109.47328 * 262.75777 * 3 2 1 25 25 H 1.09000 * 109.47091 * 142.75082 * 3 2 1 26 26 H 0.97005 * 120.00308 * 180.02562 * 8 7 5 27 27 H 1.07998 * 125.60870 * 0.05834 * 16 15 13 28 28 H 1.07998 * 119.51745 * 179.97438 * 20 19 18 29 29 H 1.08000 * 120.03195 * 179.74545 * 21 20 19 30 30 H 1.08001 * 120.44744 * 180.26927 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.2728 -0.5343 5 6 3.4289 -2.2912 0.3192 6 1 3.9384 -3.1662 -0.0565 7 6 3.1102 -2.1986 1.6686 8 7 2.0450 -1.5288 2.0478 9 14 4.1959 -3.0262 2.9436 10 1 5.1766 -2.0439 3.4714 11 1 3.3540 -3.5324 4.0572 12 1 4.9203 -4.1604 2.3158 13 6 3.2200 -1.4423 -1.8657 14 8 3.0052 -0.5114 -2.6202 15 6 3.6123 -2.7475 -2.4052 16 6 4.7029 -3.5295 -1.9929 17 7 4.7294 -4.6266 -2.7080 18 7 3.6668 -4.6189 -3.6180 19 7 3.2489 -5.5334 -4.5925 20 6 2.1977 -5.2871 -5.3316 21 6 1.4683 -4.1060 -5.1734 22 6 1.8443 -3.1938 -4.2286 23 6 2.9678 -3.4571 -3.4377 24 1 2.9713 0.1304 1.0194 25 1 2.9710 0.8188 -0.6220 26 1 1.8227 -1.4638 2.9898 27 1 5.4042 -3.2696 -1.2138 28 1 1.8920 -6.0052 -6.0781 29 1 0.6054 -3.9163 -5.7945 30 1 1.2839 -2.2802 -4.0963 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000574472921.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:54:45 Heat of formation + Delta-G solvation = 156.943476 kcal Electronic energy + Delta-G solvation = -19988.120847 eV Core-core repulsion = 16787.994928 eV Total energy + Delta-G solvation = -3200.125919 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -41.45142 -38.78405 -37.48298 -35.62828 -34.53690 -32.96393 -31.82619 -30.91031 -29.53001 -27.35714 -25.09684 -24.48414 -23.07648 -21.68625 -19.42552 -18.28379 -17.74841 -17.03647 -16.55453 -15.88258 -15.70808 -15.35669 -14.65644 -14.50068 -13.84088 -13.66677 -13.26085 -13.11446 -12.71620 -12.34982 -12.30033 -12.02369 -11.61964 -11.41430 -11.31007 -11.05838 -10.63127 -10.61797 -10.52991 -10.34514 -10.20887 -9.42101 -9.27172 -8.88131 -8.26586 -7.65769 -6.72538 -4.09672 0.47793 1.25905 1.69940 2.72110 3.01985 3.14774 3.16852 3.23309 3.47442 3.91116 4.01981 4.07214 4.38107 4.61038 4.63995 4.70007 4.76757 4.95184 5.17849 5.34931 5.51967 5.70777 5.86892 5.98812 6.19639 6.27750 6.37340 6.51192 6.73824 7.24514 7.30026 7.61165 7.74262 8.06784 8.76727 8.79865 9.14631 9.55564 10.32854 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.018750 B = 0.007246 C = 0.005880 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1492.943121 B = 3863.249444 C = 4760.811209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.477 5.477 2 C 0.251 3.749 3 C 0.226 3.774 4 N -0.423 5.423 5 C -0.355 4.355 6 H 0.115 0.885 7 C 0.045 3.955 8 N -0.848 5.848 9 Si 0.914 3.086 10 H -0.272 1.272 11 H -0.284 1.284 12 H -0.265 1.265 13 C 0.528 3.472 14 O -0.598 6.598 15 C -0.193 4.193 16 C 0.093 3.907 17 N -0.262 5.262 18 N -0.182 5.182 19 N -0.224 5.224 20 C 0.113 3.887 21 C -0.184 4.184 22 C -0.008 4.008 23 C 0.068 3.932 24 H 0.127 0.873 25 H 0.096 0.904 26 H 0.277 0.723 27 H 0.212 0.788 28 H 0.200 0.800 29 H 0.152 0.848 30 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.322 -3.360 -7.766 8.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.157 5.157 2 C -0.067 4.067 3 C 0.100 3.900 4 N -0.141 5.141 5 C -0.481 4.481 6 H 0.133 0.867 7 C -0.163 4.163 8 N -0.484 5.484 9 Si 0.740 3.260 10 H -0.197 1.197 11 H -0.210 1.210 12 H -0.189 1.189 13 C 0.317 3.683 14 O -0.484 6.484 15 C -0.210 4.210 16 C -0.086 4.086 17 N -0.088 5.088 18 N -0.051 5.051 19 N -0.036 5.036 20 C -0.080 4.080 21 C -0.209 4.209 22 C -0.036 4.036 23 C -0.056 4.056 24 H 0.144 0.856 25 H 0.114 0.886 26 H 0.087 0.913 27 H 0.228 0.772 28 H 0.216 0.784 29 H 0.170 0.830 30 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.842 -4.710 -7.956 9.428 hybrid contribution -0.307 0.732 1.044 1.312 sum 1.534 -3.978 -6.912 8.121 Atomic orbital electron populations 1.80869 1.13663 1.09477 1.11662 1.29300 0.95349 0.91652 0.90382 1.18656 0.81419 0.87527 1.02413 1.43574 1.54587 1.11794 1.04113 1.19935 1.38360 1.01282 0.88560 0.86731 1.25238 0.94962 0.97469 0.98587 1.70096 1.19436 1.40566 1.18280 0.86100 0.80236 0.79705 0.79997 1.19737 1.21027 1.18908 1.16781 0.83287 0.86223 0.82018 1.90689 1.57745 1.41895 1.58106 1.19865 1.00516 0.99560 1.01040 1.24382 0.97564 0.89616 0.97033 1.77564 1.04260 1.22573 1.04376 1.50688 1.19639 1.11123 1.23631 1.75635 1.15703 1.12865 0.99419 1.24073 0.90258 0.97446 0.96267 1.21528 1.03111 0.94837 1.01384 1.20985 0.92198 0.99750 0.90642 1.19598 0.96316 0.90281 0.99384 0.85559 0.88647 0.91271 0.77177 0.78399 0.82988 0.82454 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -11.79 18.54 42.15 0.78 -11.01 16 2 C 0.25 5.85 13.96 -20.76 -0.29 5.56 16 3 C 0.23 4.75 5.12 -6.83 -0.03 4.71 16 4 N -0.42 -9.50 2.60 -119.45 -0.31 -9.81 16 5 C -0.35 -8.02 8.98 -14.99 -0.13 -8.15 16 6 H 0.12 2.50 4.51 -52.49 -0.24 2.26 16 7 C 0.05 1.02 4.70 -17.46 -0.08 0.94 16 8 N -0.85 -20.20 9.85 55.50 0.55 -19.65 16 9 Si 0.91 17.67 29.65 -169.99 -5.04 12.63 16 10 H -0.27 -5.14 7.11 56.52 0.40 -4.73 16 11 H -0.28 -5.73 7.11 56.52 0.40 -5.32 16 12 H -0.26 -5.08 7.11 56.52 0.40 -4.68 16 13 C 0.53 11.89 7.43 -12.90 -0.10 11.80 16 14 O -0.60 -14.42 16.75 5.16 0.09 -14.33 16 15 C -0.19 -4.02 5.31 -104.72 -0.56 -4.57 16 16 C 0.09 1.77 9.71 -17.10 -0.17 1.60 16 17 N -0.26 -5.15 12.61 30.76 0.39 -4.77 16 18 N -0.18 -3.48 5.25 32.45 0.17 -3.31 16 19 N -0.22 -3.58 11.96 30.59 0.37 -3.21 16 20 C 0.11 1.26 11.28 -17.42 -0.20 1.06 16 21 C -0.18 -2.08 10.04 -39.62 -0.40 -2.48 16 22 C -0.01 -0.12 10.09 -39.55 -0.40 -0.52 16 23 C 0.07 1.31 6.87 -84.04 -0.58 0.73 16 24 H 0.13 2.57 6.22 -51.93 -0.32 2.25 16 25 H 0.10 1.79 7.52 -51.93 -0.39 1.40 16 26 H 0.28 6.33 8.31 -40.82 -0.34 5.99 16 27 H 0.21 3.38 7.31 -52.49 -0.38 3.00 16 28 H 0.20 1.13 8.06 -52.49 -0.42 0.71 16 29 H 0.15 1.09 8.06 -52.49 -0.42 0.67 16 30 H 0.16 2.44 8.06 -52.49 -0.42 2.02 16 LS Contribution 280.07 15.07 4.22 4.22 Total: -1.00 -31.56 280.07 -3.46 -35.02 By element: Atomic # 1 Polarization: 5.30 SS G_CDS: -1.74 Total: 3.56 kcal Atomic # 6 Polarization: 13.60 SS G_CDS: -2.93 Total: 10.67 kcal Atomic # 7 Polarization: -53.71 SS G_CDS: 1.94 Total: -51.77 kcal Atomic # 8 Polarization: -14.42 SS G_CDS: 0.09 Total: -14.33 kcal Atomic # 14 Polarization: 17.67 SS G_CDS: -5.04 Total: 12.63 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -31.56 -3.46 -35.02 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000574472921.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 191.959 kcal (2) G-P(sol) polarization free energy of solvation -31.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 160.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.458 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.016 kcal (6) G-S(sol) free energy of system = (1) + (5) 156.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds