Wall clock time and date at job start Mon Mar 30 2020 00:49:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.36940 * 120.00103 * 2 1 4 4 H 1.07998 * 119.99872 * 202.53235 * 3 2 1 5 5 C 1.38813 * 119.99660 * 22.52645 * 3 2 1 6 6 N 1.31615 * 120.00391 * 11.40343 * 5 3 2 7 7 Si 1.86801 * 119.99468 * 191.40006 * 5 3 2 8 8 H 1.48506 * 109.47265 * 60.00299 * 7 5 3 9 9 H 1.48503 * 109.47259 * 180.02562 * 7 5 3 10 10 H 1.48495 * 109.47230 * 299.99972 * 7 5 3 11 11 C 1.46500 * 119.99973 * 179.97438 * 2 1 3 12 12 C 1.50696 * 109.47235 * 270.00702 * 11 2 1 13 13 C 1.38293 * 119.98391 * 259.99853 * 12 11 2 14 14 C 1.38201 * 120.14211 * 179.97438 * 13 12 11 15 15 C 1.38289 * 120.14591 * 0.02562 * 14 13 12 16 16 C 1.38502 * 120.02709 * 359.97438 * 15 14 13 17 17 C 1.38502 * 119.98782 * 79.72281 * 12 11 2 18 18 O 1.36496 * 131.53793 * 0.02803 * 17 12 11 19 19 C 1.43993 * 105.48513 * 197.28931 * 18 17 12 20 20 F 1.39896 * 110.56976 * 91.43553 * 19 18 17 21 21 F 1.39899 * 110.56932 * 214.15905 * 19 18 17 22 22 O 1.36504 * 131.53844 * 180.02562 * 16 15 14 23 23 H 1.08997 * 109.47449 * 274.06075 * 1 2 3 24 24 H 1.09007 * 109.46751 * 34.05931 * 1 2 3 25 25 H 1.08997 * 109.47018 * 154.05284 * 1 2 3 26 26 H 0.97004 * 119.99878 * 180.02562 * 6 5 3 27 27 H 1.08997 * 109.47068 * 30.00354 * 11 2 1 28 28 H 1.08996 * 109.47232 * 150.00496 * 11 2 1 29 29 H 1.08001 * 119.92443 * 359.97438 * 13 12 11 30 30 H 1.08006 * 119.92902 * 179.97438 * 14 13 12 31 31 H 1.08001 * 119.98426 * 179.97438 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1498 1.1859 0.0000 4 1 3.1679 1.2216 -0.3584 5 6 1.5351 2.3422 0.4606 6 7 0.3878 2.2672 1.1011 7 14 2.3365 4.0046 0.1713 8 1 2.4861 4.2348 -1.2882 9 1 1.4866 5.0724 0.7567 10 1 3.6741 4.0282 0.8158 11 6 2.1975 -1.2687 0.0006 12 6 2.4486 -1.7032 1.4215 13 6 3.6834 -1.4826 2.0038 14 6 3.9170 -1.8792 3.3069 15 6 2.9172 -2.4990 4.0341 16 6 1.6781 -2.7232 3.4573 17 6 1.4407 -2.3182 2.1457 18 8 0.1568 -2.6423 1.8147 19 6 -0.5164 -2.8727 3.0665 20 9 -1.1072 -1.6928 3.5314 21 9 -1.4767 -3.8809 2.9299 22 8 0.5432 -3.3026 3.9470 23 1 -0.3634 0.0728 1.0250 24 1 -0.3633 0.8514 -0.5756 25 1 -0.3633 -0.9241 -0.4496 26 1 -0.0419 3.0753 1.4226 27 1 1.6085 -2.0286 -0.5130 28 1 3.1500 -1.1386 -0.5132 29 1 4.4668 -0.9992 1.4390 30 1 4.8828 -1.7056 3.7581 31 1 3.1027 -2.8083 5.0521 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000591257606.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:49:21 Heat of formation + Delta-G solvation = -110.680550 kcal Electronic energy + Delta-G solvation = -21539.825987 eV Core-core repulsion = 17845.113083 eV Total energy + Delta-G solvation = -3694.712905 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -49.17894 -47.62209 -41.82938 -37.79932 -36.65486 -35.39484 -32.01309 -30.10806 -29.45852 -26.16833 -25.68871 -24.90835 -23.01093 -22.31159 -20.60935 -18.88263 -18.73631 -18.38391 -17.04850 -16.56950 -15.57883 -15.22280 -14.89285 -14.55393 -14.37976 -14.24913 -13.87711 -13.69839 -13.67510 -13.48419 -13.36940 -13.00361 -12.81630 -12.14055 -11.76572 -11.49247 -11.24121 -10.89751 -10.80568 -10.67123 -10.31194 -10.08449 -9.96910 -8.62439 -8.39296 -8.14054 -6.87631 -5.80459 -3.25445 1.33443 1.48174 2.00185 2.60428 3.34056 3.39627 3.40602 3.88849 4.19652 4.34129 4.44364 4.58259 5.08197 5.20461 5.28517 5.44766 5.48338 5.61226 5.70494 6.03208 6.23570 6.28762 6.49022 6.51735 6.60595 6.79645 6.89696 7.21159 7.35586 7.69201 7.76794 8.29737 9.13445 9.75148 10.24770 11.23225 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021075 B = 0.007287 C = 0.006342 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1328.264134 B = 3841.647912 C = 4414.241394 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.165 3.835 2 N -0.585 5.585 3 C -0.259 4.259 4 H 0.072 0.928 5 C 0.005 3.995 6 N -0.899 5.899 7 Si 0.908 3.092 8 H -0.282 1.282 9 H -0.290 1.290 10 H -0.282 1.282 11 C 0.178 3.822 12 C -0.045 4.045 13 C -0.092 4.092 14 C -0.104 4.104 15 C -0.106 4.106 16 C 0.016 3.984 17 C 0.035 3.965 18 O -0.280 6.280 19 C 0.566 3.434 20 F -0.151 7.151 21 F -0.127 7.127 22 O -0.297 6.297 23 H 0.028 0.972 24 H 0.047 0.953 25 H 0.000 1.000 26 H 0.255 0.745 27 H 0.053 0.947 28 H 0.063 0.937 29 H 0.139 0.861 30 H 0.136 0.864 31 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.716 -10.088 3.773 11.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 N -0.305 5.305 3 C -0.389 4.389 4 H 0.090 0.910 5 C -0.194 4.194 6 N -0.542 5.542 7 Si 0.737 3.263 8 H -0.209 1.209 9 H -0.216 1.216 10 H -0.208 1.208 11 C 0.051 3.949 12 C -0.050 4.050 13 C -0.111 4.111 14 C -0.123 4.123 15 C -0.125 4.125 16 C -0.028 4.028 17 C -0.009 4.009 18 O -0.199 6.199 19 C 0.458 3.542 20 F -0.133 7.133 21 F -0.109 7.109 22 O -0.217 6.217 23 H 0.047 0.953 24 H 0.066 0.934 25 H 0.019 0.981 26 H 0.066 0.934 27 H 0.071 0.929 28 H 0.082 0.918 29 H 0.156 0.844 30 H 0.154 0.846 31 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.327 -10.051 3.766 11.237 hybrid contribution -0.278 0.994 0.362 1.094 sum 3.049 -9.057 4.128 10.410 Atomic orbital electron populations 1.20837 0.81859 0.95813 0.99455 1.44215 1.02199 1.00141 1.83923 1.19222 0.98587 0.84966 1.36090 0.90995 1.25128 0.97623 0.98806 0.97876 1.70080 1.17660 1.27543 1.38926 0.86294 0.78557 0.83450 0.77970 1.20877 1.21572 1.20787 1.20057 0.97314 0.89058 0.88513 1.20476 0.90046 0.92314 1.02138 1.20908 0.95912 0.99214 0.95063 1.20914 0.98465 0.98533 0.94344 1.19869 0.89430 1.02818 1.00432 1.19562 0.89285 1.01254 0.92661 1.19327 0.84833 1.03272 0.93490 1.87614 1.21735 1.84676 1.25890 1.22026 0.79845 0.74590 0.77781 1.93294 1.84437 1.47510 1.88037 1.93189 1.62829 1.59835 1.95002 1.87585 1.15862 1.66690 1.51610 0.95322 0.93416 0.98134 0.93439 0.92865 0.91824 0.84369 0.84623 0.85018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 4.18 8.95 59.85 0.54 4.71 16 2 N -0.59 -14.55 2.91 -182.50 -0.53 -15.08 16 3 C -0.26 -6.87 9.67 -15.06 -0.15 -7.02 16 4 H 0.07 1.81 7.85 -52.49 -0.41 1.40 16 5 C 0.01 0.14 5.13 -17.43 -0.09 0.05 16 6 N -0.90 -26.12 10.60 55.49 0.59 -25.53 16 7 Si 0.91 21.36 29.57 -169.99 -5.03 16.33 16 8 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 9 H -0.29 -6.94 7.11 56.52 0.40 -6.53 16 10 H -0.28 -6.49 7.11 56.52 0.40 -6.08 16 11 C 0.18 3.60 5.84 -5.20 -0.03 3.57 16 12 C -0.04 -0.86 5.47 -104.51 -0.57 -1.43 16 13 C -0.09 -1.49 9.66 -39.57 -0.38 -1.88 16 14 C -0.10 -1.46 10.04 -39.58 -0.40 -1.86 16 15 C -0.11 -1.59 10.06 -39.47 -0.40 -1.99 16 16 C 0.02 0.28 7.15 -39.08 -0.28 0.01 16 17 C 0.04 0.70 6.84 -39.08 -0.27 0.43 16 18 O -0.28 -5.65 11.28 -45.67 -0.52 -6.17 16 19 C 0.57 10.51 3.70 101.05 0.37 10.88 16 20 F -0.15 -3.01 17.58 2.25 0.04 -2.97 16 21 F -0.13 -2.10 17.56 2.25 0.04 -2.06 16 22 O -0.30 -5.35 11.37 -45.70 -0.52 -5.87 16 23 H 0.03 0.80 7.42 -51.93 -0.39 0.41 16 24 H 0.05 1.28 7.19 -51.93 -0.37 0.91 16 25 H 0.00 0.00 7.85 -51.93 -0.41 -0.40 16 26 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 27 H 0.05 1.02 7.86 -51.93 -0.41 0.61 16 28 H 0.06 1.16 7.89 -51.93 -0.41 0.75 16 29 H 0.14 1.99 8.03 -52.49 -0.42 1.57 16 30 H 0.14 1.41 8.06 -52.48 -0.42 0.98 16 31 H 0.13 1.58 8.06 -52.49 -0.42 1.16 16 LS Contribution 283.22 15.07 4.27 4.27 Total: -1.00 -29.97 283.22 -6.11 -36.08 By element: Atomic # 1 Polarization: -1.69 SS G_CDS: -2.80 Total: -4.49 kcal Atomic # 6 Polarization: 7.14 SS G_CDS: -1.65 Total: 5.49 kcal Atomic # 7 Polarization: -40.67 SS G_CDS: 0.06 Total: -40.61 kcal Atomic # 8 Polarization: -11.01 SS G_CDS: -1.04 Total: -12.04 kcal Atomic # 9 Polarization: -5.11 SS G_CDS: 0.08 Total: -5.03 kcal Atomic # 14 Polarization: 21.36 SS G_CDS: -5.03 Total: 16.33 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.97 -6.11 -36.08 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000591257606.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.601 kcal (2) G-P(sol) polarization free energy of solvation -29.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.080 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.681 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds