Wall clock time and date at job start Mon Mar 30 2020 01:26:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42902 * 109.47380 * 2 1 4 4 C 1.35536 * 117.00349 * 180.02562 * 3 2 1 5 5 N 1.32754 * 120.46793 * 359.97438 * 4 3 2 6 6 C 1.32453 * 120.65739 * 179.72838 * 5 4 3 7 7 N 1.38452 * 119.17691 * 180.02562 * 6 5 4 8 8 C 1.46502 * 119.99864 * 359.97438 * 7 6 5 9 9 C 1.46496 * 120.00334 * 180.02562 * 7 6 5 10 10 C 1.50699 * 109.47453 * 89.99598 * 9 7 6 11 11 H 1.08000 * 119.99660 * 0.02562 * 10 9 7 12 12 C 1.37877 * 120.00239 * 180.02562 * 10 9 7 13 13 N 1.31513 * 119.99918 * 359.97438 * 12 10 9 14 14 Si 1.86795 * 120.00006 * 180.02562 * 12 10 9 15 15 H 1.48504 * 109.47657 * 89.99752 * 14 12 10 16 16 H 1.48506 * 109.47268 * 209.99828 * 14 12 10 17 17 H 1.48500 * 109.47421 * 329.99536 * 14 12 10 18 18 N 1.32464 * 121.64966 * 0.02562 * 6 5 4 19 19 C 1.32460 * 120.89298 * 359.97438 * 18 6 5 20 20 C 1.38308 * 119.25250 * 359.97438 * 19 18 6 21 21 Cl 1.73605 * 120.75471 * 180.02562 * 20 19 18 22 22 H 1.08993 * 109.47358 * 179.97438 * 1 2 3 23 23 H 1.08994 * 109.47227 * 300.00181 * 1 2 3 24 24 H 1.09006 * 109.46949 * 59.99932 * 1 2 3 25 25 H 1.09002 * 109.47078 * 240.00097 * 2 1 3 26 26 H 1.08998 * 109.47551 * 120.00054 * 2 1 3 27 27 H 1.08999 * 109.47184 * 90.00261 * 8 7 6 28 28 H 1.08999 * 109.47318 * 209.99941 * 8 7 6 29 29 H 1.09001 * 109.47118 * 330.00353 * 8 7 6 30 30 H 1.09004 * 109.47412 * 210.00089 * 9 7 6 31 31 H 1.09001 * 109.46811 * 329.99850 * 9 7 6 32 32 H 0.97000 * 119.99950 * 180.02562 * 13 12 10 33 33 H 1.07999 * 120.37119 * 179.97438 * 19 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3500 1.5249 -0.0005 5 7 4.1673 0.4787 -0.0005 6 6 5.4810 0.6479 -0.0065 7 7 6.3048 -0.4648 -0.0068 8 6 5.7210 -1.8084 -0.0001 9 6 7.7603 -0.2986 -0.0127 10 6 8.2649 -0.2379 1.4060 11 1 7.5707 -0.3159 2.2297 12 6 9.6126 -0.0830 1.6524 13 7 10.4578 0.0114 0.6493 14 14 10.2380 -0.0085 3.4110 15 1 10.5632 -1.3798 3.8793 16 1 11.4581 0.8361 3.4671 17 1 9.1899 0.5773 4.2848 18 7 6.0263 1.8551 -0.0121 19 6 5.2703 2.9429 -0.0124 20 6 3.8937 2.8092 -0.0074 21 17 2.8660 4.2083 -0.0084 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 1.8933 -0.5138 -0.8900 26 1 1.8934 -0.5138 0.8899 27 1 5.5717 -2.1448 -1.0260 28 1 6.3948 -2.4948 0.5128 29 1 4.7623 -1.7854 0.5180 30 1 8.2204 -1.1429 -0.5262 31 1 8.0183 0.6256 -0.5299 32 1 11.4060 0.1200 0.8227 33 1 5.7239 3.9230 -0.0166 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000593459975.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:54 Heat of formation + Delta-G solvation = 15.498204 kcal Electronic energy + Delta-G solvation = -18518.603377 eV Core-core repulsion = 15413.451425 eV Total energy + Delta-G solvation = -3105.151952 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.75737 -38.53007 -36.44178 -35.73806 -33.06754 -32.62616 -31.62351 -29.88506 -27.92106 -25.78356 -24.22814 -23.54459 -22.36453 -21.10340 -18.29615 -17.58227 -16.61343 -16.29969 -15.79682 -15.62002 -14.74272 -14.65822 -14.22702 -13.66194 -13.52084 -13.29701 -12.68502 -12.61971 -12.19251 -11.80722 -11.75283 -11.59529 -11.29078 -11.00311 -10.96156 -10.91619 -10.74285 -10.65040 -10.16217 -10.00489 -9.71177 -8.84664 -8.70122 -8.46627 -7.15438 -6.08916 -4.15031 1.48941 1.61566 2.47619 2.92706 3.26942 3.33897 3.36921 3.47849 4.26006 4.40022 4.49116 4.92952 4.93623 5.07613 5.11919 5.24587 5.32792 5.47457 5.64861 5.73793 5.80687 5.92137 5.97369 6.24949 6.34502 6.79773 7.14831 7.25021 7.40986 7.64423 7.84919 8.13386 8.14347 8.74108 8.92244 9.49715 10.97660 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021735 B = 0.005224 C = 0.004608 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1287.912324 B = 5358.277363 C = 6074.453273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.064 3.936 3 O -0.295 6.295 4 C 0.415 3.585 5 N -0.625 5.625 6 C 0.603 3.397 7 N -0.555 5.555 8 C 0.103 3.897 9 C 0.253 3.747 10 C -0.526 4.526 11 H 0.056 0.944 12 C 0.065 3.935 13 N -0.893 5.893 14 Si 0.898 3.102 15 H -0.280 1.280 16 H -0.284 1.284 17 H -0.275 1.275 18 N -0.548 5.548 19 C 0.234 3.766 20 C -0.248 4.248 21 Cl -0.063 7.063 22 H 0.077 0.923 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.044 0.956 28 H 0.074 0.926 29 H 0.067 0.933 30 H 0.036 0.964 31 H 0.054 0.946 32 H 0.264 0.736 33 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.724 1.348 -2.460 15.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.011 4.011 3 O -0.199 6.199 4 C 0.224 3.776 5 N -0.367 5.367 6 C 0.248 3.752 7 N -0.264 5.264 8 C -0.041 4.041 9 C 0.134 3.866 10 C -0.565 4.565 11 H 0.074 0.926 12 C -0.138 4.138 13 N -0.532 5.532 14 Si 0.726 3.274 15 H -0.207 1.207 16 H -0.210 1.210 17 H -0.200 1.200 18 N -0.273 5.273 19 C 0.063 3.937 20 C -0.285 4.285 21 Cl -0.035 7.035 22 H 0.096 0.904 23 H 0.083 0.917 24 H 0.083 0.917 25 H 0.085 0.915 26 H 0.086 0.914 27 H 0.063 0.937 28 H 0.093 0.907 29 H 0.085 0.915 30 H 0.054 0.946 31 H 0.072 0.928 32 H 0.074 0.926 33 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -15.087 0.576 -2.511 15.305 hybrid contribution -0.143 0.622 1.033 1.214 sum -15.230 1.198 -1.478 15.348 Atomic orbital electron populations 1.21805 0.93053 1.02726 1.03271 1.22634 0.94590 0.81065 1.02805 1.86278 1.16243 1.30656 1.86753 1.19294 0.84098 0.87915 0.86295 1.67595 1.04942 1.32669 1.31459 1.19041 0.83161 0.87078 0.85878 1.47001 1.07484 1.01365 1.70570 1.21553 0.99086 0.82864 1.00617 1.19501 0.70319 0.98901 0.97887 1.21375 0.92401 1.50692 0.92012 0.92579 1.24886 0.96575 0.94953 0.97369 1.69922 1.03071 1.49596 1.30594 0.86503 0.78392 0.77947 0.84605 1.20660 1.21014 1.19969 1.68333 1.38306 0.97035 1.23648 1.22829 0.86673 0.98057 0.86119 1.21179 0.93082 0.86858 1.27402 1.98299 1.67639 1.39631 1.97915 0.90386 0.91671 0.91696 0.91453 0.91436 0.93743 0.90715 0.91455 0.94577 0.92781 0.92629 0.80885 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.33 10.28 37.15 0.38 -0.95 16 2 C 0.06 0.78 6.06 37.15 0.23 1.00 16 3 O -0.30 -4.47 9.68 -18.30 -0.18 -4.65 16 4 C 0.41 7.19 7.52 -16.69 -0.13 7.06 16 5 N -0.62 -11.73 8.05 -13.96 -0.11 -11.84 16 6 C 0.60 12.76 8.18 -322.83 -2.64 10.12 16 7 N -0.55 -11.98 2.96 -185.33 -0.55 -12.53 16 8 C 0.10 1.78 10.44 59.85 0.62 2.40 16 9 C 0.25 6.34 5.16 -5.20 -0.03 6.31 16 10 C -0.53 -14.36 9.39 -34.44 -0.32 -14.68 16 11 H 0.06 1.57 7.81 -52.49 -0.41 1.16 16 12 C 0.06 1.78 5.46 -17.82 -0.10 1.68 16 13 N -0.89 -25.55 13.29 55.43 0.74 -24.81 16 14 Si 0.90 21.35 29.54 -169.99 -5.02 16.32 16 15 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 16 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 17 H -0.27 -6.57 7.11 56.52 0.40 -6.16 16 18 N -0.55 -11.68 9.11 -13.97 -0.13 -11.80 16 19 C 0.23 4.06 11.10 -17.25 -0.19 3.87 16 20 C -0.25 -4.12 6.38 -39.10 -0.25 -4.37 16 21 Cl -0.06 -0.89 28.63 -51.86 -1.48 -2.38 16 22 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 23 H 0.06 0.57 8.14 -51.93 -0.42 0.14 16 24 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 25 H 0.07 0.81 8.12 -51.93 -0.42 0.39 16 26 H 0.07 0.84 8.12 -51.93 -0.42 0.42 16 27 H 0.04 0.69 8.14 -51.93 -0.42 0.26 16 28 H 0.07 1.27 8.07 -51.93 -0.42 0.85 16 29 H 0.07 1.09 7.33 -51.93 -0.38 0.71 16 30 H 0.04 0.93 8.07 -51.93 -0.42 0.51 16 31 H 0.05 1.47 7.33 -51.93 -0.38 1.09 16 32 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 33 H 0.17 2.44 8.06 -52.49 -0.42 2.01 16 LS Contribution 306.33 15.07 4.62 4.62 Total: -1.00 -29.96 306.33 -8.64 -38.61 By element: Atomic # 1 Polarization: 0.12 SS G_CDS: -4.10 Total: -3.98 kcal Atomic # 6 Polarization: 14.87 SS G_CDS: -2.42 Total: 12.44 kcal Atomic # 7 Polarization: -60.94 SS G_CDS: -0.05 Total: -60.99 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -0.18 Total: -4.65 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.02 Total: 16.32 kcal Atomic # 17 Polarization: -0.89 SS G_CDS: -1.48 Total: -2.38 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -29.96 -8.64 -38.61 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000593459975.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.103 kcal (2) G-P(sol) polarization free energy of solvation -29.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.641 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.605 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds