Wall clock time and date at job start Mon Mar 30 2020 01:26:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42903 * 109.47126 * 2 1 4 4 C 1.35529 * 117.00053 * 180.02562 * 3 2 1 5 5 N 1.32748 * 120.47047 * 359.97438 * 4 3 2 6 6 C 1.32459 * 120.65510 * 179.97438 * 5 4 3 7 7 N 1.38457 * 119.17173 * 180.02562 * 6 5 4 8 8 C 1.46503 * 119.99581 * 180.02562 * 7 6 5 9 9 H 1.09002 * 109.47197 * 35.00075 * 8 7 6 10 10 C 1.52997 * 109.47171 * 274.99508 * 8 7 6 11 11 C 1.50709 * 109.46643 * 154.99626 * 8 7 6 12 12 H 1.07999 * 120.00252 * 35.00579 * 11 8 7 13 13 C 1.37880 * 119.99697 * 214.99990 * 11 8 7 14 14 N 1.31514 * 119.99804 * 184.92220 * 13 11 8 15 15 Si 1.86802 * 120.00029 * 4.91852 * 13 11 8 16 16 H 1.48491 * 109.47052 * 84.83523 * 15 13 11 17 17 H 1.48503 * 109.46638 * 204.83186 * 15 13 11 18 18 H 1.48501 * 109.46852 * 324.83194 * 15 13 11 19 19 N 1.32466 * 121.65120 * 0.02562 * 6 5 4 20 20 C 1.32456 * 120.89293 * 359.97438 * 19 6 5 21 21 C 1.38309 * 119.25501 * 359.97438 * 20 19 6 22 22 Cl 1.73598 * 120.75517 * 180.02562 * 21 20 19 23 23 H 1.08994 * 109.46763 * 60.00586 * 1 2 3 24 24 H 1.08995 * 109.46814 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.47109 * 300.00550 * 1 2 3 26 26 H 1.08995 * 109.47390 * 239.99889 * 2 1 3 27 27 H 1.09007 * 109.47017 * 119.99327 * 2 1 3 28 28 H 0.97000 * 120.00183 * 0.02562 * 7 6 5 29 29 H 1.09002 * 109.47089 * 295.03542 * 10 8 7 30 30 H 1.08997 * 109.47163 * 55.03343 * 10 8 7 31 31 H 1.08996 * 109.47179 * 175.03963 * 10 8 7 32 32 H 0.97001 * 119.99859 * 180.02562 * 14 13 11 33 33 H 1.07999 * 120.36951 * 179.97438 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.3500 1.5249 -0.0005 5 7 4.1672 0.4788 -0.0005 6 6 5.4810 0.6481 -0.0016 7 7 6.3049 -0.4646 -0.0021 8 6 7.7604 -0.2982 -0.0026 9 1 8.0261 0.5793 0.5868 10 6 8.2523 -0.1153 -1.4398 11 6 8.4059 -1.5207 0.5975 12 1 7.9715 -2.4959 0.4344 13 6 9.5512 -1.3941 1.3547 14 7 10.1688 -2.4675 1.7974 15 14 10.2256 0.3021 1.7517 16 1 9.5383 0.8392 2.9534 17 1 11.6835 0.2053 2.0172 18 1 9.9913 1.2099 0.6001 19 7 6.0262 1.8554 -0.0021 20 6 5.2703 2.9430 -0.0022 21 6 3.8937 2.8094 -0.0022 22 17 2.8659 4.2084 -0.0029 23 1 -0.3632 0.5137 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8899 26 1 1.8934 -0.5138 -0.8899 27 1 1.8934 -0.5138 0.8901 28 1 5.9184 -1.3543 -0.0020 29 1 8.0655 -1.0275 -2.0066 30 1 7.7202 0.7155 -1.9030 31 1 9.3215 0.0961 -1.4338 32 1 10.9744 -2.3784 2.3304 33 1 5.7238 3.9232 -0.0023 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000593462087.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:56 Heat of formation + Delta-G solvation = 4.421155 kcal Electronic energy + Delta-G solvation = -18407.711778 eV Core-core repulsion = 15302.079489 eV Total energy + Delta-G solvation = -3105.632289 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.89747 -38.63490 -36.51457 -35.82374 -33.18109 -32.77228 -31.75639 -30.41065 -28.61258 -25.40329 -24.66131 -23.19612 -22.58459 -20.46589 -18.65099 -18.11610 -17.00971 -16.44572 -15.92015 -15.62289 -15.11165 -14.65423 -14.22982 -13.73124 -13.53567 -13.07924 -12.72528 -12.61105 -12.53845 -12.19993 -11.76795 -11.59696 -11.23780 -11.07883 -11.04329 -11.00398 -10.81082 -10.58380 -10.12087 -9.92432 -9.31352 -9.16712 -8.91694 -8.72862 -7.44697 -6.30457 -4.35407 1.33077 1.44423 2.34052 2.82442 3.20494 3.29453 3.34520 3.49716 4.09182 4.25563 4.36580 4.83622 4.90566 4.98390 4.99270 5.19839 5.29117 5.34135 5.60511 5.70731 5.88694 6.08328 6.25628 6.49653 6.59555 6.80896 6.98158 7.14734 7.19428 7.34564 7.63733 7.92145 8.36705 8.65752 8.77511 9.29807 10.81048 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.023589 B = 0.005123 C = 0.004492 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1186.725841 B = 5464.028141 C = 6231.492397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.063 3.937 3 O -0.294 6.294 4 C 0.419 3.581 5 N -0.624 5.624 6 C 0.600 3.400 7 N -0.654 5.654 8 C 0.240 3.760 9 H 0.058 0.942 10 C -0.146 4.146 11 C -0.533 4.533 12 H 0.079 0.921 13 C 0.083 3.917 14 N -0.885 5.885 15 Si 0.875 3.125 16 H -0.273 1.273 17 H -0.285 1.285 18 H -0.257 1.257 19 N -0.572 5.572 20 C 0.235 3.765 21 C -0.247 4.247 22 Cl -0.059 7.059 23 H 0.064 0.936 24 H 0.079 0.921 25 H 0.064 0.936 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.409 0.591 29 H 0.046 0.954 30 H 0.030 0.970 31 H 0.055 0.945 32 H 0.269 0.731 33 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.564 8.931 -3.900 17.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.012 4.012 3 O -0.198 6.198 4 C 0.228 3.772 5 N -0.366 5.366 6 C 0.243 3.757 7 N -0.283 5.283 8 C 0.138 3.862 9 H 0.076 0.924 10 C -0.205 4.205 11 C -0.571 4.571 12 H 0.097 0.903 13 C -0.122 4.122 14 N -0.521 5.521 15 Si 0.701 3.299 16 H -0.198 1.198 17 H -0.211 1.211 18 H -0.181 1.181 19 N -0.299 5.299 20 C 0.066 3.934 21 C -0.285 4.285 22 Cl -0.031 7.031 23 H 0.083 0.917 24 H 0.097 0.903 25 H 0.084 0.916 26 H 0.087 0.913 27 H 0.088 0.912 28 H 0.246 0.754 29 H 0.065 0.935 30 H 0.049 0.951 31 H 0.074 0.926 32 H 0.079 0.921 33 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges -13.876 8.258 -3.789 16.586 hybrid contribution -0.323 0.979 0.321 1.080 sum -14.199 9.237 -3.467 17.290 Atomic orbital electron populations 1.21809 0.92930 1.02850 1.03269 1.22687 0.94704 0.80795 1.03051 1.86280 1.16078 1.30948 1.86473 1.19336 0.84238 0.87871 0.85726 1.67671 1.04833 1.32823 1.31227 1.19360 0.83512 0.87502 0.85293 1.45645 1.06881 1.03947 1.71848 1.19289 0.74178 0.98665 0.94042 0.92422 1.22226 1.00472 0.99314 0.98519 1.20992 1.10338 0.92993 1.32823 0.90268 1.24939 0.96129 0.96984 0.94170 1.69877 1.18722 1.28698 1.34807 0.86877 0.78183 0.84761 0.80053 1.19828 1.21134 1.18121 1.68230 1.38802 0.97309 1.25581 1.22766 0.86852 0.97875 0.85943 1.21149 0.93087 0.87046 1.27209 1.98308 1.67543 1.39376 1.97888 0.91680 0.90267 0.91648 0.91290 0.91206 0.75406 0.93485 0.95125 0.92604 0.92092 0.80818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.30 10.28 37.16 0.38 -0.92 16 2 C 0.06 0.74 6.06 37.16 0.23 0.97 16 3 O -0.29 -4.25 9.68 -18.28 -0.18 -4.43 16 4 C 0.42 6.86 7.52 -16.69 -0.13 6.73 16 5 N -0.62 -11.14 9.40 -13.96 -0.13 -11.27 16 6 C 0.60 11.68 8.40 -322.81 -2.71 8.96 16 7 N -0.65 -13.39 5.22 -56.92 -0.30 -13.68 16 8 C 0.24 5.46 2.21 -69.08 -0.15 5.31 16 9 H 0.06 1.38 4.66 -51.93 -0.24 1.14 16 10 C -0.15 -3.05 9.48 37.16 0.35 -2.70 16 11 C -0.53 -13.98 9.05 -34.43 -0.31 -14.29 16 12 H 0.08 2.22 8.06 -52.49 -0.42 1.80 16 13 C 0.08 2.26 5.47 -17.82 -0.10 2.16 16 14 N -0.89 -25.55 13.96 55.43 0.77 -24.78 16 15 Si 0.87 20.65 26.99 -169.99 -4.59 16.06 16 16 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 17 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 18 H -0.26 -5.83 6.82 56.52 0.39 -5.44 16 19 N -0.57 -10.79 9.20 -13.97 -0.13 -10.92 16 20 C 0.23 3.61 11.10 -17.26 -0.19 3.42 16 21 C -0.25 -3.78 6.38 -39.09 -0.25 -4.02 16 22 Cl -0.06 -0.77 28.63 -51.86 -1.48 -2.26 16 23 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 24 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 25 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 26 H 0.07 0.82 8.12 -51.93 -0.42 0.40 16 27 H 0.07 0.85 8.12 -51.92 -0.42 0.43 16 28 H 0.41 7.94 8.71 -40.82 -0.36 7.58 16 29 H 0.05 0.95 8.14 -51.93 -0.42 0.52 16 30 H 0.03 0.59 8.14 -51.93 -0.42 0.17 16 31 H 0.05 1.16 8.14 -51.93 -0.42 0.74 16 32 H 0.27 7.29 8.31 -40.82 -0.34 6.95 16 33 H 0.17 2.06 8.06 -52.49 -0.42 1.64 16 LS Contribution 302.93 15.07 4.57 4.57 Total: -1.00 -28.80 302.93 -8.32 -37.12 By element: Atomic # 1 Polarization: 7.94 SS G_CDS: -3.97 Total: 3.97 kcal Atomic # 6 Polarization: 8.50 SS G_CDS: -2.88 Total: 5.62 kcal Atomic # 7 Polarization: -60.87 SS G_CDS: 0.22 Total: -60.65 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -0.18 Total: -4.43 kcal Atomic # 14 Polarization: 20.65 SS G_CDS: -4.59 Total: 16.06 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.48 Total: -2.26 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -28.80 -8.32 -37.12 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000593462087.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.546 kcal (2) G-P(sol) polarization free energy of solvation -28.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.323 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.125 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds