Wall clock time and date at job start Mon Mar 30 2020 01:20:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.08995 * 109.47431 * 2 1 4 4 C 1.50705 * 109.46860 * 119.99945 * 2 1 3 5 5 H 1.08000 * 120.00079 * 119.99948 * 4 2 1 6 6 C 1.37869 * 120.00049 * 299.99579 * 4 2 1 7 7 N 1.31525 * 119.99935 * 0.02562 * 6 4 2 8 8 Si 1.86800 * 120.00366 * 180.02562 * 6 4 2 9 9 H 1.48505 * 109.46879 * 59.99830 * 8 6 4 10 10 H 1.48493 * 109.47351 * 179.97438 * 8 6 4 11 11 H 1.48503 * 109.46927 * 300.00185 * 8 6 4 12 12 N 1.46500 * 109.47027 * 239.99636 * 2 1 3 13 13 C 1.46506 * 119.99885 * 300.00167 * 12 2 1 14 14 C 1.34775 * 120.00120 * 119.99967 * 12 2 1 15 15 O 1.21645 * 119.99773 * 354.83025 * 14 12 2 16 16 C 1.47031 * 120.00028 * 175.10534 * 14 12 2 17 17 C 1.38541 * 126.90382 * 99.60202 * 16 14 12 18 18 Cl 1.73599 * 127.33945 * 359.97438 * 17 16 14 19 19 C 1.39810 * 105.32173 * 179.97438 * 17 16 14 20 20 N 1.30834 * 107.88136 * 359.97438 * 19 17 16 21 21 N 1.28439 * 110.97801 * 359.75477 * 20 19 17 22 22 C 1.46498 * 125.18706 * 180.23991 * 21 20 19 23 23 H 1.08995 * 109.47431 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.46694 * 300.00205 * 1 2 3 25 25 H 1.09001 * 109.47254 * 60.00054 * 1 2 3 26 26 H 0.97000 * 120.00072 * 179.97438 * 7 6 4 27 27 H 1.08996 * 109.47402 * 274.88676 * 13 12 2 28 28 H 1.08993 * 109.47020 * 34.89016 * 13 12 2 29 29 H 1.09003 * 109.46729 * 154.88344 * 13 12 2 30 30 H 1.08000 * 126.05768 * 180.02562 * 19 17 16 31 31 H 1.09001 * 109.47117 * 265.17074 * 22 21 20 32 32 H 1.09000 * 109.47152 * 25.17143 * 22 21 20 33 33 H 1.08997 * 109.47402 * 145.16831 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7104 1.2305 5 1 2.6532 -1.5885 1.1315 6 6 1.6993 -0.2393 2.4827 7 7 0.9428 0.8298 2.6033 8 14 2.3224 -1.1194 4.0080 9 1 3.8075 -1.1190 4.0078 10 1 1.8279 -0.4190 5.2204 11 1 1.8279 -2.5197 4.0083 12 7 2.0184 -0.6907 -1.1961 13 6 1.6644 -2.0933 -1.4279 14 6 2.7932 -0.0358 -2.0834 15 8 3.0098 1.1527 -1.9408 16 6 3.3717 -0.7565 -3.2269 17 6 2.8960 -0.7711 -4.5280 18 17 1.4992 0.0526 -5.1477 19 6 3.7807 -1.5904 -5.2356 20 7 4.6943 -2.0118 -4.3992 21 7 4.4912 -1.5419 -3.2213 22 6 5.3285 -1.8100 -2.0495 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 0.7082 1.1610 3.4843 27 1 2.3666 -2.7375 -0.8989 28 1 0.6547 -2.2785 -1.0616 29 1 1.7084 -2.3074 -2.4958 30 1 3.7210 -1.8320 -6.2865 31 1 4.9076 -2.6419 -1.4848 32 1 6.3373 -2.0648 -2.3743 33 1 5.3637 -0.9227 -1.4173 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597144383.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:20:47 Heat of formation + Delta-G solvation = 45.042959 kcal Electronic energy + Delta-G solvation = -19192.929237 eV Core-core repulsion = 16089.058442 eV Total energy + Delta-G solvation = -3103.870795 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -42.51254 -38.94145 -36.44143 -35.49312 -33.34601 -32.95631 -30.87911 -29.16299 -27.12871 -26.30442 -25.30939 -23.35950 -21.69245 -20.56905 -18.88274 -17.36156 -16.53250 -16.46416 -15.64987 -15.46482 -14.91120 -14.53824 -14.04722 -13.84414 -13.19135 -13.06028 -12.72866 -12.68192 -12.36519 -11.80561 -11.66442 -11.64472 -11.53357 -11.15798 -10.90603 -10.81207 -10.42445 -10.36794 -10.25870 -9.49137 -9.31451 -9.14141 -8.63298 -8.52293 -7.79338 -6.16615 -4.26148 1.62057 1.92218 2.50088 2.64010 3.16745 3.20912 3.27086 3.27345 3.69196 4.30119 4.55101 4.74771 5.06272 5.10506 5.14656 5.37137 5.41776 5.46984 5.62681 5.94656 6.18002 6.19804 6.60190 6.70517 6.76124 6.95792 7.25437 7.36491 7.59861 7.89405 7.95182 8.05083 8.30860 8.61756 8.81176 9.40562 10.88643 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.025432 B = 0.006135 C = 0.005362 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1100.726823 B = 4562.550780 C = 5220.567152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.259 3.741 3 H 0.066 0.934 4 C -0.530 4.530 5 H 0.059 0.941 6 C 0.067 3.933 7 N -0.885 5.885 8 Si 0.900 3.100 9 H -0.277 1.277 10 H -0.285 1.285 11 H -0.276 1.276 12 N -0.574 5.574 13 C 0.085 3.915 14 C 0.574 3.426 15 O -0.526 6.526 16 C 0.015 3.985 17 C -0.128 4.128 18 Cl -0.024 7.024 19 C 0.020 3.980 20 N -0.281 5.281 21 N -0.267 5.267 22 C 0.087 3.913 23 H 0.031 0.969 24 H 0.096 0.904 25 H 0.015 0.985 26 H 0.265 0.735 27 H 0.050 0.950 28 H 0.078 0.922 29 H 0.053 0.947 30 H 0.192 0.808 31 H 0.091 0.909 32 H 0.101 0.899 33 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.680 -6.963 -10.952 13.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.160 3.840 3 H 0.083 0.917 4 C -0.569 4.569 5 H 0.077 0.923 6 C -0.136 4.136 7 N -0.522 5.522 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.202 1.202 12 N -0.304 5.304 13 C -0.058 4.058 14 C 0.356 3.644 15 O -0.401 6.401 16 C -0.116 4.116 17 C -0.166 4.166 18 Cl 0.004 6.996 19 C -0.158 4.158 20 N -0.112 5.112 21 N -0.054 5.054 22 C -0.053 4.053 23 H 0.051 0.949 24 H 0.114 0.886 25 H 0.034 0.966 26 H 0.076 0.924 27 H 0.069 0.931 28 H 0.096 0.904 29 H 0.072 0.928 30 H 0.209 0.791 31 H 0.109 0.891 32 H 0.120 0.880 33 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 4.628 -6.824 -10.511 13.359 hybrid contribution -0.552 -0.062 0.715 0.906 sum 4.076 -6.886 -9.795 12.648 Atomic orbital electron populations 1.22098 0.97817 0.99591 1.01168 1.19069 0.91330 0.94451 0.79172 0.91659 1.21212 1.32443 1.13153 0.90100 0.92282 1.24884 0.94842 0.94927 0.98955 1.69869 1.35882 1.22408 1.24080 0.86535 0.79178 0.79597 0.81953 1.20232 1.21074 1.20186 1.48266 1.47647 1.11859 1.22648 1.21593 1.02019 0.82679 0.99542 1.16933 0.80376 0.86343 0.80743 1.90827 1.61327 1.14139 1.73837 1.21688 0.92766 1.00578 0.96603 1.21175 0.96667 1.06442 0.92294 1.98340 1.37840 1.77191 1.86238 1.23420 0.92545 0.99572 1.00263 1.73187 1.25270 1.21643 0.91102 1.45487 1.19133 1.32710 1.08111 1.22302 0.94914 1.04542 0.83563 0.94946 0.88595 0.96631 0.92448 0.93123 0.90374 0.92831 0.79150 0.89092 0.88038 0.88261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.46 8.94 37.16 0.33 -3.13 16 2 C 0.26 6.37 2.63 -69.08 -0.18 6.19 16 3 H 0.07 1.86 6.91 -51.93 -0.36 1.50 16 4 C -0.53 -13.58 8.37 -34.44 -0.29 -13.87 16 5 H 0.06 1.46 7.51 -52.49 -0.39 1.06 16 6 C 0.07 1.75 5.30 -17.82 -0.09 1.65 16 7 N -0.88 -24.18 11.32 55.43 0.63 -23.55 16 8 Si 0.90 20.12 29.54 -169.99 -5.02 15.10 16 9 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 10 H -0.29 -6.39 7.11 56.52 0.40 -5.99 16 11 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 12 N -0.57 -11.97 2.75 -176.68 -0.49 -12.46 16 13 C 0.09 1.46 9.57 59.85 0.57 2.03 16 14 C 0.57 12.06 6.95 -12.70 -0.09 11.97 16 15 O -0.53 -13.04 16.45 5.24 0.09 -12.96 16 16 C 0.01 0.26 4.80 -82.00 -0.39 -0.13 16 17 C -0.13 -2.03 6.85 -38.88 -0.27 -2.29 16 18 Cl -0.02 -0.37 29.24 -51.86 -1.52 -1.89 16 19 C 0.02 0.27 12.04 -17.39 -0.21 0.07 16 20 N -0.28 -4.08 11.89 30.61 0.36 -3.71 16 21 N -0.27 -4.04 3.75 -63.85 -0.24 -4.28 16 22 C 0.09 1.04 11.11 59.85 0.66 1.70 16 23 H 0.03 0.69 6.69 -51.93 -0.35 0.35 16 24 H 0.10 2.45 6.07 -51.93 -0.32 2.13 16 25 H 0.01 0.33 8.14 -51.93 -0.42 -0.09 16 26 H 0.27 6.93 8.31 -40.82 -0.34 6.59 16 27 H 0.05 0.81 7.99 -51.93 -0.41 0.39 16 28 H 0.08 1.31 6.45 -51.93 -0.33 0.98 16 29 H 0.05 0.83 6.76 -51.93 -0.35 0.48 16 30 H 0.19 1.85 8.06 -52.49 -0.42 1.43 16 31 H 0.09 0.98 8.14 -51.93 -0.42 0.55 16 32 H 0.10 0.94 8.14 -51.93 -0.42 0.51 16 33 H 0.10 1.30 7.93 -51.93 -0.41 0.89 16 LS Contribution 299.90 15.07 4.52 4.52 Total: -1.00 -30.28 299.90 -5.37 -35.66 By element: Atomic # 1 Polarization: 3.13 SS G_CDS: -3.75 Total: -0.62 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: 0.05 Total: 4.19 kcal Atomic # 7 Polarization: -44.27 SS G_CDS: 0.27 Total: -44.00 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: 0.09 Total: -12.96 kcal Atomic # 14 Polarization: 20.12 SS G_CDS: -5.02 Total: 15.10 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -1.52 Total: -1.89 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -30.28 -5.37 -35.66 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597144383.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.698 kcal (2) G-P(sol) polarization free energy of solvation -30.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.655 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds