Wall clock time and date at job start Mon Mar 30 2020 01:28:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 N 1.28438 * 125.18607 * 2 1 4 4 C 1.30835 * 110.97952 * 179.73981 * 3 2 1 5 5 C 1.39808 * 107.87480 * 0.41336 * 4 3 2 6 6 Cl 1.73606 * 127.33155 * 179.86659 * 5 4 3 7 7 C 1.36744 * 125.18525 * 180.02562 * 2 1 3 8 8 C 1.47029 * 126.91023 * 359.97416 * 7 2 1 9 9 O 1.21647 * 119.99623 * 92.98789 * 8 7 2 10 10 N 1.34772 * 119.99879 * 272.99051 * 8 7 2 11 11 C 1.46505 * 119.99415 * 185.28468 * 10 8 7 12 12 C 1.53005 * 109.46751 * 180.02562 * 11 10 8 13 13 C 1.52997 * 109.47146 * 180.02562 * 12 11 10 14 14 C 1.50693 * 109.47302 * 180.02562 * 13 12 11 15 15 H 1.07999 * 120.00022 * 359.97438 * 14 13 12 16 16 C 1.37883 * 120.00203 * 180.02562 * 14 13 12 17 17 N 1.31513 * 119.99810 * 359.97438 * 16 14 13 18 18 Si 1.86801 * 120.00110 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.46888 * 89.99689 * 18 16 14 20 20 H 1.48491 * 109.47138 * 209.99752 * 18 16 14 21 21 H 1.48499 * 109.47202 * 329.99713 * 18 16 14 22 22 H 1.09006 * 109.46543 * 274.74351 * 1 2 3 23 23 H 1.08997 * 109.47458 * 34.74497 * 1 2 3 24 24 H 1.08998 * 109.46681 * 154.74844 * 1 2 3 25 25 H 1.07998 * 126.06099 * 180.30094 * 4 3 2 26 26 H 0.96993 * 120.00658 * 5.29421 * 10 8 7 27 27 H 1.08994 * 109.47490 * 300.00028 * 11 10 8 28 28 H 1.09006 * 109.46874 * 60.00826 * 11 10 8 29 29 H 1.08999 * 109.47502 * 300.00511 * 12 11 10 30 30 H 1.08998 * 109.46956 * 60.00514 * 12 11 10 31 31 H 1.08999 * 109.47003 * 300.00408 * 13 12 11 32 32 H 1.09004 * 109.47147 * 59.99734 * 13 12 11 33 33 H 0.96996 * 119.99789 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.2052 1.0497 0.0000 4 6 3.4735 0.7286 0.0055 5 6 3.5630 -0.6666 -0.0001 6 17 5.0079 -1.6289 0.0004 7 6 2.2530 -1.1176 -0.0005 8 6 1.8010 -2.5167 -0.0006 9 8 1.6659 -3.1121 -1.0528 10 7 1.5363 -3.1394 1.1650 11 6 1.1983 -4.5649 1.1735 12 6 0.9450 -5.0203 2.6121 13 6 0.5926 -6.5091 2.6212 14 6 0.3426 -6.9575 4.0379 15 1 0.4270 -6.2514 4.8507 16 6 0.0070 -8.2696 4.2967 17 7 -0.0953 -9.1296 3.3071 18 14 -0.3023 -8.8256 6.0531 19 1 -1.7403 -8.6532 6.3808 20 1 0.0690 -10.2567 6.1919 21 1 0.5187 -8.0089 6.9827 22 1 -0.3632 0.0850 1.0242 23 1 -0.3634 0.8444 -0.5857 24 1 -0.3632 -0.9295 -0.4384 25 1 4.3040 1.4189 0.0114 26 1 1.5695 -2.6439 1.9981 27 1 0.3006 -4.7290 0.5775 28 1 2.0246 -5.1368 0.7512 29 1 1.8424 -4.8560 3.2086 30 1 0.1186 -4.4484 3.0340 31 1 -0.3046 -6.6737 2.0246 32 1 1.4193 -7.0807 2.1992 33 1 -0.3317 -10.0526 3.4891 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597150693.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:28:08 Heat of formation + Delta-G solvation = 23.019020 kcal Electronic energy + Delta-G solvation = -17810.501652 eV Core-core repulsion = 14705.675827 eV Total energy + Delta-G solvation = -3104.825825 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.86604 -39.43233 -36.77082 -35.58830 -33.70567 -33.41924 -31.69761 -30.67171 -27.52962 -26.88994 -24.02134 -22.42169 -21.98337 -20.83622 -19.98602 -18.23453 -16.84658 -16.50102 -16.17569 -15.61007 -15.58831 -14.79611 -14.52394 -14.41733 -13.78680 -13.54626 -13.45874 -13.09795 -12.34964 -12.09626 -11.93966 -11.90120 -11.81848 -10.94839 -10.83606 -10.75344 -10.67304 -10.34489 -9.95226 -9.58959 -9.50106 -9.18313 -9.03786 -9.00224 -8.41476 -6.06093 -4.09444 1.21092 1.53766 2.14123 2.18868 2.58877 3.11786 3.28029 3.34867 3.37568 4.17959 4.38736 4.42464 4.69759 4.71293 5.01336 5.02031 5.09148 5.29929 5.56273 5.64990 5.85680 6.03658 6.22069 6.25938 6.48789 6.68079 6.90145 7.38290 7.57776 7.58555 7.69304 7.91878 7.99780 8.32834 8.97055 9.55123 11.05153 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.027799 B = 0.003467 C = 0.003331 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1006.989245 B = 8075.224390 C = 8404.295257 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.266 5.266 3 N -0.273 5.273 4 C 0.024 3.976 5 C -0.117 4.117 6 Cl -0.017 7.017 7 C -0.007 4.007 8 C 0.583 3.417 9 O -0.515 6.515 10 N -0.706 5.706 11 C 0.115 3.885 12 C -0.121 4.121 13 C 0.024 3.976 14 C -0.524 4.524 15 H 0.055 0.945 16 C 0.058 3.942 17 N -0.893 5.893 18 Si 0.893 3.107 19 H -0.280 1.280 20 H -0.286 1.286 21 H -0.274 1.274 22 H 0.093 0.907 23 H 0.103 0.897 24 H 0.098 0.902 25 H 0.195 0.805 26 H 0.402 0.598 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.019 0.981 32 H 0.020 0.980 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.399 19.982 -5.671 21.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.054 5.054 3 N -0.104 5.104 4 C -0.155 4.155 5 C -0.155 4.155 6 Cl 0.011 6.989 7 C -0.138 4.138 8 C 0.364 3.636 9 O -0.390 6.390 10 N -0.357 5.357 11 C -0.007 4.007 12 C -0.159 4.159 13 C -0.014 4.014 14 C -0.562 4.562 15 H 0.074 0.926 16 C -0.144 4.144 17 N -0.532 5.532 18 Si 0.721 3.279 19 H -0.207 1.207 20 H -0.212 1.212 21 H -0.199 1.199 22 H 0.111 0.889 23 H 0.121 0.879 24 H 0.117 0.883 25 H 0.212 0.788 26 H 0.236 0.764 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 3.476 20.150 -6.479 21.450 hybrid contribution 0.536 -0.894 1.340 1.698 sum 4.012 19.256 -5.139 20.330 Atomic orbital electron populations 1.22327 0.71991 1.05993 1.05191 1.45519 1.07756 1.01471 1.50701 1.73234 1.03309 1.13314 1.20534 1.23518 0.93905 0.92634 1.05395 1.21255 0.87400 0.92564 1.14251 1.98370 1.32982 1.70270 1.97241 1.21409 0.90917 0.89876 1.11550 1.16880 0.78218 0.83566 0.84891 1.90884 1.50827 1.66091 1.31159 1.46212 1.68652 1.12638 1.08170 1.21816 1.01062 0.77506 1.00337 1.21911 1.00838 1.01205 0.91955 1.19029 0.97140 0.87735 0.97447 1.21184 1.47402 0.94809 0.92810 0.92630 1.25025 0.95425 0.96832 0.97116 1.69959 1.48209 1.03991 1.31049 0.86579 0.78502 0.77933 0.84903 1.20652 1.21173 1.19867 0.88880 0.87874 0.88333 0.78770 0.76362 0.91167 0.91157 0.92483 0.92619 0.96224 0.96157 0.92877 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.61 11.22 59.85 0.67 1.28 16 2 N -0.27 -2.92 3.75 -63.85 -0.24 -3.16 16 3 N -0.27 -3.07 11.89 30.61 0.36 -2.71 16 4 C 0.02 0.25 12.04 -17.39 -0.21 0.04 16 5 C -0.12 -1.43 6.89 -38.88 -0.27 -1.70 16 6 Cl -0.02 -0.21 29.24 -51.86 -1.52 -1.72 16 7 C -0.01 -0.09 6.72 -82.00 -0.55 -0.64 16 8 C 0.58 8.62 6.91 -12.70 -0.09 8.53 16 9 O -0.52 -9.49 17.12 5.24 0.09 -9.40 16 10 N -0.71 -9.66 5.55 -61.50 -0.34 -10.00 16 11 C 0.11 1.88 5.68 -4.04 -0.02 1.86 16 12 C -0.12 -2.24 5.27 -26.73 -0.14 -2.38 16 13 C 0.02 0.59 4.97 -27.89 -0.14 0.45 16 14 C -0.52 -14.28 9.11 -34.44 -0.31 -14.59 16 15 H 0.06 1.46 7.74 -52.49 -0.41 1.05 16 16 C 0.06 1.61 5.46 -17.82 -0.10 1.52 16 17 N -0.89 -26.34 13.29 55.43 0.74 -25.60 16 18 Si 0.89 21.13 29.54 -169.99 -5.02 16.11 16 19 H -0.28 -6.54 7.11 56.52 0.40 -6.13 16 20 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 21 H -0.27 -6.33 7.11 56.52 0.40 -5.93 16 22 H 0.09 0.50 8.14 -51.93 -0.42 0.07 16 23 H 0.10 0.55 8.14 -51.93 -0.42 0.13 16 24 H 0.10 0.73 7.66 -51.93 -0.40 0.33 16 25 H 0.20 1.37 8.06 -52.49 -0.42 0.95 16 26 H 0.40 4.58 8.46 -40.82 -0.35 4.23 16 27 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 28 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 29 H 0.06 1.03 8.14 -51.93 -0.42 0.60 16 30 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 31 H 0.02 0.51 8.14 -51.93 -0.42 0.08 16 32 H 0.02 0.53 8.14 -51.93 -0.42 0.10 16 33 H 0.26 7.28 8.31 -40.82 -0.34 6.95 16 LS Contribution 311.32 15.07 4.69 4.69 Total: -1.00 -32.70 311.32 -6.48 -39.18 By element: Atomic # 1 Polarization: 2.33 SS G_CDS: -4.09 Total: -1.76 kcal Atomic # 6 Polarization: -4.47 SS G_CDS: -1.16 Total: -5.63 kcal Atomic # 7 Polarization: -41.99 SS G_CDS: 0.52 Total: -41.47 kcal Atomic # 8 Polarization: -9.49 SS G_CDS: 0.09 Total: -9.40 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -5.02 Total: 16.11 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.52 Total: -1.72 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -32.70 -6.48 -39.18 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597150693.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.204 kcal (2) G-P(sol) polarization free energy of solvation -32.701 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.185 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.019 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds