Wall clock time and date at job start Mon Mar 30 2020 01:22:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46498 * 109.47018 * 2 1 4 4 N 1.28434 * 125.19055 * 84.87672 * 3 2 1 5 5 C 1.30835 * 110.98484 * 179.97438 * 4 3 2 6 6 C 1.39809 * 107.87663 * 0.02562 * 5 4 3 7 7 Cl 1.73595 * 127.33483 * 180.02562 * 6 5 4 8 8 C 1.36750 * 125.18746 * 264.85833 * 3 2 1 9 9 C 1.47030 * 126.90623 * 0.03807 * 8 3 2 10 10 O 1.21643 * 120.00073 * 93.57813 * 9 8 3 11 11 N 1.34774 * 120.00058 * 273.58469 * 9 8 3 12 12 C 1.46501 * 120.00141 * 5.31814 * 11 9 8 13 13 C 1.46495 * 120.00263 * 185.31693 * 11 9 8 14 14 C 1.50697 * 109.47250 * 89.99666 * 13 11 9 15 15 H 1.08001 * 119.99966 * 0.02562 * 14 13 11 16 16 C 1.37883 * 119.99997 * 180.02562 * 14 13 11 17 17 N 1.31509 * 120.00067 * 0.02562 * 16 14 13 18 18 Si 1.86801 * 119.99642 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.47277 * 60.00548 * 18 16 14 20 20 H 1.48505 * 109.46933 * 180.02562 * 18 16 14 21 21 H 1.48499 * 109.47308 * 299.99752 * 18 16 14 22 22 H 1.08990 * 109.47301 * 304.94846 * 1 2 3 23 23 H 1.09001 * 109.47312 * 64.95668 * 1 2 3 24 24 H 1.09001 * 109.46671 * 184.95022 * 1 2 3 25 25 H 1.09004 * 109.47375 * 239.99937 * 2 1 3 26 26 H 1.08997 * 109.47049 * 120.00088 * 2 1 3 27 27 H 1.08004 * 126.05774 * 179.97438 * 5 4 3 28 28 H 1.08997 * 109.47679 * 93.28575 * 12 11 9 29 29 H 1.09002 * 109.47244 * 213.29311 * 12 11 9 30 30 H 1.09009 * 109.47018 * 333.28544 * 12 11 9 31 31 H 1.09005 * 109.47533 * 210.00139 * 13 11 9 32 32 H 1.09001 * 109.47126 * 329.99943 * 13 11 9 33 33 H 0.97001 * 119.99922 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.1766 2.1103 1.0454 5 6 2.6269 3.2964 0.7257 6 6 2.7740 3.3393 -0.6640 7 17 3.3377 4.6725 -1.6223 8 6 2.3754 2.0908 -1.1131 9 6 2.3422 1.6230 -2.5066 10 8 1.3639 1.8375 -3.1971 11 7 3.3956 0.9565 -3.0190 12 6 4.5239 0.5959 -2.1570 13 6 3.4124 0.5927 -4.4380 14 6 4.0489 1.7028 -5.2338 15 1 4.4058 2.5905 -4.7326 16 6 4.1759 1.5853 -6.6017 17 7 3.7409 0.5046 -7.2120 18 14 4.9656 2.9611 -7.5880 19 1 6.3574 3.1730 -7.1156 20 1 4.9814 2.5928 -9.0266 21 1 4.1853 4.2114 -7.4063 22 1 -0.3633 0.5886 0.8423 23 1 -0.3634 0.4350 -0.9310 24 1 -0.3633 -1.0239 0.0887 25 1 1.8934 -0.5139 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 2.8454 4.1000 1.4133 28 1 4.3752 -0.4105 -1.7658 29 1 5.4476 0.6283 -2.7349 30 1 4.5886 1.3018 -1.3289 31 1 3.9857 -0.3248 -4.5711 32 1 2.3910 0.4364 -4.7851 33 1 3.8299 0.4221 -8.1744 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000598617973.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:22:31 Heat of formation + Delta-G solvation = 39.826960 kcal Electronic energy + Delta-G solvation = -19039.340011 eV Core-core repulsion = 15935.243033 eV Total energy + Delta-G solvation = -3104.096978 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.53329 -38.79525 -36.35468 -34.98884 -34.56135 -32.69257 -30.70882 -29.79409 -27.86229 -26.02609 -24.28709 -23.60914 -21.83422 -21.09950 -18.96362 -17.39307 -16.59755 -16.15931 -15.86399 -15.26106 -15.17729 -14.40866 -14.22673 -14.13488 -13.63064 -12.96015 -12.88692 -12.43413 -12.28436 -12.17699 -11.96106 -11.69776 -11.54560 -11.38811 -11.28294 -10.96254 -10.63849 -10.33272 -10.21917 -9.73815 -9.45177 -9.15212 -8.58298 -8.46729 -7.84914 -6.09347 -4.14132 1.65220 1.95007 2.53527 2.68771 3.12400 3.31282 3.35287 3.39862 3.73173 4.41069 4.41890 4.72033 4.78030 4.93496 5.01753 5.25691 5.28761 5.42613 5.48626 5.58023 5.63114 5.78491 5.94837 6.13037 6.23007 6.64849 6.89773 7.27662 7.37649 7.86686 7.97241 8.13571 8.15594 8.67896 8.91851 9.51183 10.98980 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021583 B = 0.006538 C = 0.005506 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1297.021514 B = 4281.328648 C = 5083.889323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.118 3.882 3 N -0.268 5.268 4 N -0.281 5.281 5 C 0.020 3.980 6 C -0.126 4.126 7 Cl -0.019 7.019 8 C 0.014 3.986 9 C 0.576 3.424 10 O -0.516 6.516 11 N -0.583 5.583 12 C 0.080 3.920 13 C 0.245 3.755 14 C -0.530 4.530 15 H 0.060 0.940 16 C 0.064 3.936 17 N -0.895 5.895 18 Si 0.898 3.102 19 H -0.276 1.276 20 H -0.286 1.286 21 H -0.275 1.275 22 H 0.068 0.932 23 H 0.070 0.930 24 H 0.082 0.918 25 H 0.101 0.899 26 H 0.105 0.895 27 H 0.191 0.809 28 H 0.046 0.954 29 H 0.080 0.920 30 H 0.058 0.942 31 H 0.038 0.962 32 H 0.048 0.952 33 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.983 -0.400 15.966 16.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.002 4.002 3 N -0.057 5.057 4 N -0.111 5.111 5 C -0.158 4.158 6 C -0.164 4.164 7 Cl 0.009 6.991 8 C -0.117 4.117 9 C 0.358 3.642 10 O -0.390 6.390 11 N -0.314 5.314 12 C -0.064 4.064 13 C 0.127 3.873 14 C -0.569 4.569 15 H 0.079 0.921 16 C -0.139 4.139 17 N -0.533 5.533 18 Si 0.725 3.275 19 H -0.201 1.201 20 H -0.211 1.211 21 H -0.201 1.201 22 H 0.087 0.913 23 H 0.089 0.911 24 H 0.101 0.899 25 H 0.119 0.881 26 H 0.123 0.877 27 H 0.208 0.792 28 H 0.064 0.936 29 H 0.099 0.901 30 H 0.076 0.924 31 H 0.056 0.944 32 H 0.066 0.934 33 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -1.841 -1.122 16.198 16.341 hybrid contribution 0.854 1.432 -1.313 2.123 sum -0.986 0.310 14.885 14.921 Atomic orbital electron populations 1.22176 0.93127 1.03614 1.03995 1.22064 0.96515 0.76309 1.05324 1.45704 1.45833 1.12231 1.01919 1.73133 1.19956 1.04260 1.13774 1.23428 1.04070 0.95601 0.92732 1.21232 1.11796 0.90855 0.92502 1.98362 1.87429 1.42651 1.70639 1.21735 1.06275 0.93251 0.90427 1.16863 0.84250 0.79637 0.83413 1.90836 1.32830 1.55509 1.59870 1.48158 1.16931 1.53603 1.12731 1.21695 0.91103 0.98862 0.94699 1.19422 0.99233 0.96093 0.72574 1.21384 1.39652 1.03700 0.92142 0.92144 1.24910 0.95477 0.95962 0.97521 1.69912 1.46395 1.27096 1.09924 0.86558 0.79769 0.82378 0.78790 1.20129 1.21119 1.20053 0.91335 0.91064 0.89918 0.88084 0.87710 0.79195 0.93555 0.90097 0.92374 0.94428 0.93425 0.92570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.79 10.24 37.16 0.38 -1.41 16 2 C 0.12 1.32 6.91 -4.04 -0.03 1.30 16 3 N -0.27 -3.94 3.35 -57.11 -0.19 -4.13 16 4 N -0.28 -4.01 11.89 30.61 0.36 -3.65 16 5 C 0.02 0.28 12.04 -17.39 -0.21 0.07 16 6 C -0.13 -2.09 6.86 -38.88 -0.27 -2.36 16 7 Cl -0.02 -0.33 29.24 -51.86 -1.52 -1.84 16 8 C 0.01 0.25 4.74 -82.00 -0.39 -0.14 16 9 C 0.58 12.29 6.77 -12.70 -0.09 12.21 16 10 O -0.52 -13.11 16.66 5.24 0.09 -13.02 16 11 N -0.58 -12.24 2.86 -184.38 -0.53 -12.77 16 12 C 0.08 1.31 10.37 59.85 0.62 1.93 16 13 C 0.25 6.22 5.22 -5.20 -0.03 6.20 16 14 C -0.53 -14.79 9.39 -34.44 -0.32 -15.12 16 15 H 0.06 1.70 7.81 -52.49 -0.41 1.29 16 16 C 0.06 1.79 5.46 -17.82 -0.10 1.70 16 17 N -0.89 -26.08 13.29 55.43 0.74 -25.35 16 18 Si 0.90 21.76 29.54 -169.99 -5.02 16.74 16 19 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 20 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 21 H -0.28 -6.73 7.11 56.52 0.40 -6.33 16 22 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 23 H 0.07 0.93 8.14 -51.93 -0.42 0.50 16 24 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.10 1.16 7.65 -51.93 -0.40 0.76 16 26 H 0.10 0.89 8.14 -51.93 -0.42 0.47 16 27 H 0.19 1.92 8.06 -52.48 -0.42 1.50 16 28 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 29 H 0.08 1.33 8.10 -51.93 -0.42 0.91 16 30 H 0.06 0.89 6.64 -51.92 -0.34 0.55 16 31 H 0.04 0.95 8.07 -51.93 -0.42 0.53 16 32 H 0.05 1.35 7.35 -51.93 -0.38 0.97 16 33 H 0.26 7.31 8.31 -40.82 -0.34 6.98 16 LS Contribution 308.83 15.07 4.65 4.65 Total: -1.00 -32.76 308.83 -5.88 -38.64 By element: Atomic # 1 Polarization: 0.40 SS G_CDS: -4.05 Total: -3.64 kcal Atomic # 6 Polarization: 4.79 SS G_CDS: -0.43 Total: 4.37 kcal Atomic # 7 Polarization: -46.28 SS G_CDS: 0.38 Total: -45.89 kcal Atomic # 8 Polarization: -13.11 SS G_CDS: 0.09 Total: -13.02 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -5.02 Total: 16.74 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -1.52 Total: -1.84 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -32.76 -5.88 -38.64 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598617973.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.470 kcal (2) G-P(sol) polarization free energy of solvation -32.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.643 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds