Wall clock time and date at job start Mon Mar 30 2020 01:22:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46498 * 109.47018 * 2 1 4 4 N 1.28434 * 125.19055 * 84.87672 * 3 2 1 5 5 C 1.30835 * 110.98484 * 179.97438 * 4 3 2 6 6 C 1.39809 * 107.87663 * 0.02562 * 5 4 3 7 7 Cl 1.73595 * 127.33483 * 180.02562 * 6 5 4 8 8 C 1.36750 * 125.18746 * 264.85833 * 3 2 1 9 9 C 1.47030 * 126.90623 * 0.03807 * 8 3 2 10 10 O 1.21643 * 120.00073 * 93.57813 * 9 8 3 11 11 N 1.34774 * 120.00058 * 273.58469 * 9 8 3 12 12 C 1.46501 * 120.00141 * 5.31814 * 11 9 8 13 13 C 1.46495 * 120.00263 * 185.31693 * 11 9 8 14 14 C 1.50697 * 109.47250 * 89.99666 * 13 11 9 15 15 H 1.08001 * 119.99966 * 0.02562 * 14 13 11 16 16 C 1.37883 * 119.99997 * 180.02562 * 14 13 11 17 17 N 1.31509 * 120.00067 * 0.02562 * 16 14 13 18 18 Si 1.86801 * 119.99642 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.47277 * 60.00548 * 18 16 14 20 20 H 1.48505 * 109.46933 * 180.02562 * 18 16 14 21 21 H 1.48499 * 109.47308 * 299.99752 * 18 16 14 22 22 H 1.08990 * 109.47301 * 304.94846 * 1 2 3 23 23 H 1.09001 * 109.47312 * 64.95668 * 1 2 3 24 24 H 1.09001 * 109.46671 * 184.95022 * 1 2 3 25 25 H 1.09004 * 109.47375 * 239.99937 * 2 1 3 26 26 H 1.08997 * 109.47049 * 120.00088 * 2 1 3 27 27 H 1.08004 * 126.05774 * 179.97438 * 5 4 3 28 28 H 1.08997 * 109.47679 * 93.28575 * 12 11 9 29 29 H 1.09002 * 109.47244 * 213.29311 * 12 11 9 30 30 H 1.09009 * 109.47018 * 333.28544 * 12 11 9 31 31 H 1.09005 * 109.47533 * 210.00139 * 13 11 9 32 32 H 1.09001 * 109.47126 * 329.99943 * 13 11 9 33 33 H 0.97001 * 119.99922 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.1766 2.1103 1.0454 5 6 2.6269 3.2964 0.7257 6 6 2.7740 3.3393 -0.6640 7 17 3.3377 4.6725 -1.6223 8 6 2.3754 2.0908 -1.1131 9 6 2.3422 1.6230 -2.5066 10 8 1.3639 1.8375 -3.1971 11 7 3.3956 0.9565 -3.0190 12 6 4.5239 0.5959 -2.1570 13 6 3.4124 0.5927 -4.4380 14 6 4.0489 1.7028 -5.2338 15 1 4.4058 2.5905 -4.7326 16 6 4.1759 1.5853 -6.6017 17 7 3.7409 0.5046 -7.2120 18 14 4.9656 2.9611 -7.5880 19 1 6.3574 3.1730 -7.1156 20 1 4.9814 2.5928 -9.0266 21 1 4.1853 4.2114 -7.4063 22 1 -0.3633 0.5886 0.8423 23 1 -0.3634 0.4350 -0.9310 24 1 -0.3633 -1.0239 0.0887 25 1 1.8934 -0.5139 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 2.8454 4.1000 1.4133 28 1 4.3752 -0.4105 -1.7658 29 1 5.4476 0.6283 -2.7349 30 1 4.5886 1.3018 -1.3289 31 1 3.9857 -0.3248 -4.5711 32 1 2.3910 0.4364 -4.7851 33 1 3.8299 0.4221 -8.1744 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000598617973.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:22:30 Heat of formation + Delta-G solvation = 18.361381 kcal Electronic energy + Delta-G solvation = -19040.270828 eV Core-core repulsion = 15935.243033 eV Total energy + Delta-G solvation = -3105.027795 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -43.72644 -40.49926 -37.64787 -36.78148 -35.56077 -34.77203 -32.10859 -30.82739 -29.73939 -27.57969 -25.76941 -24.99517 -23.25188 -22.41910 -20.29843 -18.84604 -18.71065 -17.68460 -17.14544 -16.81533 -16.53119 -16.23490 -15.55153 -15.30307 -14.87046 -14.50982 -14.22936 -14.01075 -13.79538 -13.55770 -13.23649 -13.13029 -12.88792 -12.87495 -12.75666 -12.59190 -12.35558 -12.23170 -11.77163 -11.57994 -11.19302 -10.65254 -10.33022 -9.84369 -9.63507 -8.24702 -6.38035 0.35535 0.73049 1.26179 1.37251 1.40482 1.41171 1.47901 1.69634 2.20256 2.39134 3.06154 3.29166 3.42801 3.89505 3.92187 4.12780 4.19856 4.20896 4.31987 4.52695 4.63449 4.73427 4.80575 4.92215 5.08862 5.13093 5.17527 5.44738 5.56215 5.73537 6.01525 6.43792 6.68621 6.81490 7.03705 7.32742 8.82799 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.021583 B = 0.006538 C = 0.005506 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1297.021514 B = 4281.328648 C = 5083.889323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.107 3.893 3 N -0.259 5.259 4 N -0.272 5.272 5 C 0.032 3.968 6 C -0.135 4.135 7 Cl -0.029 7.029 8 C -0.010 4.010 9 C 0.580 3.420 10 O -0.570 6.570 11 N -0.585 5.585 12 C 0.079 3.921 13 C 0.260 3.740 14 C -0.546 4.546 15 H 0.053 0.947 16 C 0.015 3.985 17 N -0.924 5.924 18 Si 0.960 3.040 19 H -0.261 1.261 20 H -0.276 1.276 21 H -0.279 1.279 22 H 0.070 0.930 23 H 0.036 0.964 24 H 0.113 0.887 25 H 0.095 0.905 26 H 0.142 0.858 27 H 0.228 0.772 28 H 0.079 0.921 29 H 0.078 0.922 30 H 0.071 0.929 31 H 0.037 0.963 32 H 0.008 0.992 33 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.018 -0.227 17.967 17.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C -0.012 4.012 3 N -0.048 5.048 4 N -0.102 5.102 5 C -0.146 4.146 6 C -0.173 4.173 7 Cl -0.001 7.001 8 C -0.141 4.141 9 C 0.364 3.636 10 O -0.449 6.449 11 N -0.315 5.315 12 C -0.063 4.063 13 C 0.140 3.860 14 C -0.585 4.585 15 H 0.071 0.929 16 C -0.185 4.185 17 N -0.563 5.563 18 Si 0.784 3.216 19 H -0.185 1.185 20 H -0.201 1.201 21 H -0.205 1.205 22 H 0.089 0.911 23 H 0.056 0.944 24 H 0.131 0.869 25 H 0.113 0.887 26 H 0.160 0.840 27 H 0.245 0.755 28 H 0.098 0.902 29 H 0.097 0.903 30 H 0.090 0.910 31 H 0.055 0.945 32 H 0.026 0.974 33 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -0.807 -0.972 18.244 18.287 hybrid contribution 0.508 1.325 -1.864 2.343 sum -0.299 0.353 16.380 16.386 Atomic orbital electron populations 1.22149 0.92629 1.05310 1.02194 1.22450 0.96950 0.74924 1.06833 1.46024 1.44890 1.13026 1.00867 1.73177 1.19455 1.04423 1.13128 1.23974 1.02659 0.96167 0.91795 1.21485 1.11989 0.90147 0.93682 1.98357 1.87523 1.43022 1.71168 1.21172 1.09095 0.94470 0.89366 1.17224 0.83212 0.78460 0.84687 1.90795 1.34771 1.57472 1.61827 1.48101 1.18353 1.53403 1.11654 1.21920 0.89196 1.01045 0.94178 1.18925 0.96470 0.95541 0.75066 1.21635 1.39892 1.04029 0.92906 0.92860 1.25739 0.95901 0.98268 0.98567 1.70013 1.47208 1.28763 1.10361 0.85584 0.79363 0.78984 0.77659 1.18509 1.20116 1.20513 0.91062 0.94438 0.86854 0.88664 0.84046 0.75522 0.90239 0.90311 0.91024 0.94522 0.97378 0.92267 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -3.22 10.24 71.98 0.74 -2.48 16 2 C 0.11 2.17 6.91 86.38 0.60 2.77 16 3 N -0.26 -7.09 3.35 -334.59 -1.12 -8.22 16 4 N -0.27 -6.92 11.89 -57.06 -0.68 -7.60 16 5 C 0.03 0.78 12.04 85.22 1.03 1.80 16 6 C -0.13 -4.29 6.86 22.72 0.16 -4.13 16 7 Cl -0.03 -0.97 29.24 -2.72 -0.08 -1.05 16 8 C -0.01 -0.35 4.74 40.76 0.19 -0.16 16 9 C 0.58 25.23 6.77 86.55 0.59 25.81 16 10 O -0.57 -30.35 16.66 -4.17 -0.07 -30.42 16 11 N -0.59 -24.87 2.86 -855.50 -2.44 -27.32 16 12 C 0.08 2.47 10.37 127.77 1.32 3.79 16 13 C 0.26 13.65 5.22 85.63 0.45 14.10 16 14 C -0.55 -31.08 9.39 25.60 0.24 -30.84 16 15 H 0.05 3.04 7.81 -2.91 -0.02 3.02 16 16 C 0.01 0.85 5.46 84.66 0.46 1.31 16 17 N -0.92 -54.71 13.29 21.45 0.28 -54.42 16 18 Si 0.96 44.67 29.54 68.60 2.03 46.70 16 19 H -0.26 -11.43 7.11 99.48 0.71 -10.72 16 20 H -0.28 -12.35 7.11 99.48 0.71 -11.65 16 21 H -0.28 -13.14 7.11 99.48 0.71 -12.43 16 22 H 0.07 1.35 8.14 -2.39 -0.02 1.33 16 23 H 0.04 0.98 8.14 -2.39 -0.02 0.96 16 24 H 0.11 1.48 8.14 -2.39 -0.02 1.47 16 25 H 0.10 2.07 7.65 -2.39 -0.02 2.05 16 26 H 0.14 1.86 8.14 -2.39 -0.02 1.84 16 27 H 0.23 3.65 8.06 -2.91 -0.02 3.63 16 28 H 0.08 1.96 8.14 -2.39 -0.02 1.95 16 29 H 0.08 2.50 8.10 -2.39 -0.02 2.49 16 30 H 0.07 2.07 6.64 -2.38 -0.02 2.05 16 31 H 0.04 1.90 8.07 -2.38 -0.02 1.89 16 32 H 0.01 0.49 7.35 -2.39 -0.02 0.47 16 33 H 0.27 14.95 8.31 -92.71 -0.77 14.18 16 Total: -1.00 -72.64 308.83 4.80 -67.84 By element: Atomic # 1 Polarization: 1.39 SS G_CDS: 1.12 Total: 2.50 kcal Atomic # 6 Polarization: 6.21 SS G_CDS: 5.77 Total: 11.98 kcal Atomic # 7 Polarization: -93.59 SS G_CDS: -3.96 Total: -97.55 kcal Atomic # 8 Polarization: -30.35 SS G_CDS: -0.07 Total: -30.42 kcal Atomic # 14 Polarization: 44.67 SS G_CDS: 2.03 Total: 46.70 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -0.08 Total: -1.05 kcal Total: -72.64 4.80 -67.84 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598617973.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.203 kcal (2) G-P(sol) polarization free energy of solvation -72.645 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -67.842 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds