Wall clock time and date at job start Mon Mar 30 2020 01:22:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46497 * 109.47053 * 2 1 4 4 N 1.28441 * 125.18797 * 275.20449 * 3 2 1 5 5 C 1.30835 * 110.98353 * 180.25979 * 4 3 2 6 6 C 1.39808 * 107.87385 * 359.73687 * 5 4 3 7 7 Cl 1.73599 * 127.33449 * 179.97438 * 6 5 4 8 8 C 1.36747 * 125.19351 * 95.01227 * 3 2 1 9 9 C 1.47037 * 126.89862 * 0.02562 * 8 3 2 10 10 O 1.21649 * 119.99714 * 269.38644 * 9 8 3 11 11 N 1.34769 * 120.00254 * 89.38985 * 9 8 3 12 12 C 1.46499 * 120.00196 * 174.92652 * 11 9 8 13 13 C 1.52997 * 109.47271 * 180.27566 * 12 11 9 14 14 C 1.50701 * 109.47179 * 180.02562 * 13 12 11 15 15 H 1.08000 * 120.00091 * 359.97438 * 14 13 12 16 16 C 1.37874 * 120.00398 * 179.97438 * 14 13 12 17 17 N 1.31522 * 119.99733 * 0.02562 * 16 14 13 18 18 Si 1.86793 * 120.00427 * 179.97438 * 16 14 13 19 19 H 1.48507 * 109.47051 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.47360 * 120.00101 * 18 16 14 21 21 H 1.48502 * 109.47555 * 240.00038 * 18 16 14 22 22 H 1.09004 * 109.47043 * 300.00283 * 1 2 3 23 23 H 1.08993 * 109.46893 * 59.99973 * 1 2 3 24 24 H 1.08994 * 109.47051 * 180.02562 * 1 2 3 25 25 H 1.08993 * 109.47075 * 239.99235 * 2 1 3 26 26 H 1.09002 * 109.47212 * 119.99515 * 2 1 3 27 27 H 1.07994 * 126.05970 * 179.75449 * 5 4 3 28 28 H 0.96999 * 119.99901 * 355.20523 * 11 9 8 29 29 H 1.09004 * 109.47201 * 300.27944 * 12 11 9 30 30 H 1.08999 * 109.47152 * 60.27397 * 12 11 9 31 31 H 1.08999 * 109.47067 * 299.99937 * 13 12 11 32 32 H 1.08999 * 109.47170 * 59.99842 * 13 12 11 33 33 H 0.96993 * 120.00118 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.1753 2.1108 -1.0454 5 6 2.6307 3.2950 -0.7262 6 6 2.7779 3.3379 0.6635 7 17 3.3472 4.6691 1.6213 8 6 2.3731 2.0917 1.1132 9 6 2.3381 1.6245 2.5070 10 8 1.3380 1.7907 3.1792 11 7 3.4141 1.0123 3.0397 12 6 3.4212 0.6466 4.4583 13 6 4.7521 -0.0234 4.8056 14 6 4.7591 -0.4001 6.2648 15 1 3.9004 -0.1830 6.8827 16 6 5.8618 -1.0219 6.8110 17 7 6.9078 -1.2859 6.0586 18 14 5.8708 -1.4883 8.6197 19 1 4.5838 -1.0850 9.2413 20 1 6.0448 -2.9571 8.7514 21 1 6.9908 -0.7939 9.3045 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0276 0.0005 25 1 1.8933 -0.5139 -0.8899 26 1 1.8934 -0.5138 0.8900 27 1 2.8532 4.0972 -1.4141 28 1 4.1854 0.8174 2.4847 29 1 3.2964 1.5433 5.0653 30 1 2.6030 -0.0449 4.6593 31 1 4.8768 -0.9201 4.1986 32 1 5.5703 0.6681 4.6046 33 1 7.6837 -1.7230 6.4429 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000598696534.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:22:32 Heat of formation + Delta-G solvation = 22.203817 kcal Electronic energy + Delta-G solvation = -18187.702013 eV Core-core repulsion = 15082.840839 eV Total energy + Delta-G solvation = -3104.861175 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -42.72641 -39.13938 -36.63365 -35.04308 -34.73353 -32.95998 -31.17314 -29.97721 -29.44117 -25.25437 -24.31210 -22.88159 -21.73352 -21.02416 -19.89252 -18.15236 -16.61965 -16.24875 -16.12344 -15.49506 -15.15615 -14.61250 -14.58657 -14.39590 -13.94558 -13.39940 -13.09667 -12.96873 -12.40108 -12.36382 -11.93374 -11.75550 -11.58583 -11.29053 -11.10688 -10.69978 -10.58844 -10.44179 -10.18156 -9.65323 -9.41091 -9.31305 -8.84481 -8.73202 -8.45908 -6.14524 -4.17853 1.39783 1.69644 2.32938 2.36225 2.78677 3.25291 3.32618 3.35877 3.42161 4.25855 4.36838 4.60783 4.68959 4.76721 4.89711 5.08495 5.22910 5.24986 5.32994 5.49039 5.81381 6.02634 6.17773 6.21315 6.46071 6.57496 6.66913 7.42375 7.52638 7.71594 7.76851 7.83134 8.17007 8.31459 8.88083 9.47562 10.97067 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.022724 B = 0.004318 C = 0.003940 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1231.897326 B = 6482.352803 C = 7104.018843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.115 3.885 3 N -0.263 5.263 4 N -0.274 5.274 5 C 0.022 3.978 6 C -0.119 4.119 7 Cl -0.020 7.020 8 C -0.002 4.002 9 C 0.580 3.420 10 O -0.523 6.523 11 N -0.702 5.702 12 C 0.120 3.880 13 C 0.012 3.988 14 C -0.522 4.522 15 H 0.061 0.939 16 C 0.060 3.940 17 N -0.893 5.893 18 Si 0.897 3.103 19 H -0.271 1.271 20 H -0.283 1.283 21 H -0.283 1.283 22 H 0.070 0.930 23 H 0.068 0.932 24 H 0.084 0.916 25 H 0.108 0.892 26 H 0.103 0.897 27 H 0.194 0.806 28 H 0.401 0.599 29 H 0.062 0.938 30 H 0.062 0.938 31 H 0.023 0.977 32 H 0.025 0.975 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.189 5.213 -14.602 17.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.005 4.005 3 N -0.052 5.052 4 N -0.104 5.104 5 C -0.157 4.157 6 C -0.157 4.157 7 Cl 0.009 6.991 8 C -0.133 4.133 9 C 0.361 3.639 10 O -0.398 6.398 11 N -0.352 5.352 12 C -0.001 4.001 13 C -0.025 4.025 14 C -0.561 4.561 15 H 0.079 0.921 16 C -0.142 4.142 17 N -0.532 5.532 18 Si 0.724 3.276 19 H -0.195 1.195 20 H -0.209 1.209 21 H -0.209 1.209 22 H 0.089 0.911 23 H 0.087 0.913 24 H 0.103 0.897 25 H 0.126 0.874 26 H 0.121 0.879 27 H 0.211 0.789 28 H 0.235 0.765 29 H 0.080 0.920 30 H 0.080 0.920 31 H 0.041 0.959 32 H 0.043 0.957 33 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -9.063 4.532 -14.891 18.012 hybrid contribution 0.858 0.309 1.406 1.676 sum -8.205 4.841 -13.485 16.511 Atomic orbital electron populations 1.22179 0.92982 1.03863 1.03876 1.22136 0.96601 0.75999 1.05722 1.45752 1.45372 1.12278 1.01758 1.73189 1.19418 1.04214 1.13615 1.23481 1.03751 0.95703 0.92717 1.21241 1.11126 0.90724 0.92645 1.98362 1.87237 1.42900 1.70626 1.21501 1.08050 0.93528 0.90198 1.16913 0.84317 0.78866 0.83820 1.90847 1.31959 1.55652 1.61321 1.46367 1.17434 1.57752 1.13638 1.21889 1.01865 0.99610 0.76755 1.19343 0.89942 0.95766 0.97473 1.21053 1.01724 1.39141 0.94165 0.92114 1.24991 0.95395 0.95547 0.98279 1.69962 1.05376 1.42037 1.35818 0.86455 0.78207 0.78148 0.84756 1.19544 1.20924 1.20885 0.91135 0.91289 0.89734 0.87397 0.87873 0.78946 0.76452 0.91978 0.91989 0.95870 0.95711 0.92831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.53 10.24 37.16 0.38 -1.15 16 2 C 0.11 1.12 6.91 -4.04 -0.03 1.10 16 3 N -0.26 -3.37 3.35 -57.11 -0.19 -3.57 16 4 N -0.27 -3.49 11.89 30.61 0.36 -3.13 16 5 C 0.02 0.26 12.04 -17.39 -0.21 0.05 16 6 C -0.12 -1.67 6.89 -38.89 -0.27 -1.94 16 7 Cl -0.02 -0.27 29.24 -51.86 -1.52 -1.79 16 8 C 0.00 -0.03 6.72 -82.00 -0.55 -0.58 16 9 C 0.58 9.96 6.91 -12.70 -0.09 9.87 16 10 O -0.52 -10.64 17.12 5.23 0.09 -10.55 16 11 N -0.70 -11.97 5.55 -61.51 -0.34 -12.31 16 12 C 0.12 2.43 5.62 -4.04 -0.02 2.41 16 13 C 0.01 0.29 5.09 -27.88 -0.14 0.15 16 14 C -0.52 -14.06 9.11 -34.44 -0.31 -14.37 16 15 H 0.06 1.60 7.74 -52.49 -0.41 1.20 16 16 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 17 N -0.89 -25.60 13.29 55.43 0.74 -24.86 16 18 Si 0.90 20.95 29.54 -169.99 -5.02 15.93 16 19 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 20 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 21 H -0.28 -6.57 7.11 56.52 0.40 -6.16 16 22 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 23 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.08 0.56 8.14 -51.93 -0.42 0.14 16 25 H 0.11 0.81 8.14 -51.93 -0.42 0.39 16 26 H 0.10 1.01 7.65 -51.93 -0.40 0.61 16 27 H 0.19 1.62 8.06 -52.49 -0.42 1.20 16 28 H 0.40 6.14 8.46 -40.82 -0.35 5.80 16 29 H 0.06 1.31 8.14 -51.93 -0.42 0.89 16 30 H 0.06 1.27 8.14 -51.93 -0.42 0.85 16 31 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 32 H 0.02 0.62 8.14 -51.93 -0.42 0.20 16 33 H 0.26 7.09 8.31 -40.82 -0.34 6.75 16 LS Contribution 311.62 15.07 4.70 4.70 Total: -1.00 -31.30 311.62 -6.61 -37.91 By element: Atomic # 1 Polarization: 4.68 SS G_CDS: -4.09 Total: 0.59 kcal Atomic # 6 Polarization: -1.58 SS G_CDS: -1.34 Total: -2.92 kcal Atomic # 7 Polarization: -44.43 SS G_CDS: 0.57 Total: -43.87 kcal Atomic # 8 Polarization: -10.64 SS G_CDS: 0.09 Total: -10.55 kcal Atomic # 14 Polarization: 20.95 SS G_CDS: -5.02 Total: 15.93 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -1.52 Total: -1.79 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -31.30 -6.61 -37.91 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598696534.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.111 kcal (2) G-P(sol) polarization free energy of solvation -31.296 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.611 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.907 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds