Wall clock time and date at job start Mon Mar 30 2020 01:22:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46497 * 109.47053 * 2 1 4 4 N 1.28441 * 125.18797 * 275.20449 * 3 2 1 5 5 C 1.30835 * 110.98353 * 180.25979 * 4 3 2 6 6 C 1.39808 * 107.87385 * 359.73687 * 5 4 3 7 7 Cl 1.73599 * 127.33449 * 179.97438 * 6 5 4 8 8 C 1.36747 * 125.19351 * 95.01227 * 3 2 1 9 9 C 1.47037 * 126.89862 * 0.02562 * 8 3 2 10 10 O 1.21649 * 119.99714 * 269.38644 * 9 8 3 11 11 N 1.34769 * 120.00254 * 89.38985 * 9 8 3 12 12 C 1.46499 * 120.00196 * 174.92652 * 11 9 8 13 13 C 1.52997 * 109.47271 * 180.27566 * 12 11 9 14 14 C 1.50701 * 109.47179 * 180.02562 * 13 12 11 15 15 H 1.08000 * 120.00091 * 359.97438 * 14 13 12 16 16 C 1.37874 * 120.00398 * 179.97438 * 14 13 12 17 17 N 1.31522 * 119.99733 * 0.02562 * 16 14 13 18 18 Si 1.86793 * 120.00427 * 179.97438 * 16 14 13 19 19 H 1.48507 * 109.47051 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.47360 * 120.00101 * 18 16 14 21 21 H 1.48502 * 109.47555 * 240.00038 * 18 16 14 22 22 H 1.09004 * 109.47043 * 300.00283 * 1 2 3 23 23 H 1.08993 * 109.46893 * 59.99973 * 1 2 3 24 24 H 1.08994 * 109.47051 * 180.02562 * 1 2 3 25 25 H 1.08993 * 109.47075 * 239.99235 * 2 1 3 26 26 H 1.09002 * 109.47212 * 119.99515 * 2 1 3 27 27 H 1.07994 * 126.05970 * 179.75449 * 5 4 3 28 28 H 0.96999 * 119.99901 * 355.20523 * 11 9 8 29 29 H 1.09004 * 109.47201 * 300.27944 * 12 11 9 30 30 H 1.08999 * 109.47152 * 60.27397 * 12 11 9 31 31 H 1.08999 * 109.47067 * 299.99937 * 13 12 11 32 32 H 1.08999 * 109.47170 * 59.99842 * 13 12 11 33 33 H 0.96993 * 120.00118 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.1753 2.1108 -1.0454 5 6 2.6307 3.2950 -0.7262 6 6 2.7779 3.3379 0.6635 7 17 3.3472 4.6691 1.6213 8 6 2.3731 2.0917 1.1132 9 6 2.3381 1.6245 2.5070 10 8 1.3380 1.7907 3.1792 11 7 3.4141 1.0123 3.0397 12 6 3.4212 0.6466 4.4583 13 6 4.7521 -0.0234 4.8056 14 6 4.7591 -0.4001 6.2648 15 1 3.9004 -0.1830 6.8827 16 6 5.8618 -1.0219 6.8110 17 7 6.9078 -1.2859 6.0586 18 14 5.8708 -1.4883 8.6197 19 1 4.5838 -1.0850 9.2413 20 1 6.0448 -2.9571 8.7514 21 1 6.9908 -0.7939 9.3045 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0276 0.0005 25 1 1.8933 -0.5139 -0.8899 26 1 1.8934 -0.5138 0.8900 27 1 2.8532 4.0972 -1.4141 28 1 4.1854 0.8174 2.4847 29 1 3.2964 1.5433 5.0653 30 1 2.6030 -0.0449 4.6593 31 1 4.8768 -0.9201 4.1986 32 1 5.5703 0.6681 4.6046 33 1 7.6837 -1.7230 6.4429 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000598696534.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:22:32 Heat of formation + Delta-G solvation = 1.559429 kcal Electronic energy + Delta-G solvation = -18188.597221 eV Core-core repulsion = 15082.840839 eV Total energy + Delta-G solvation = -3105.756383 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -43.74363 -40.59357 -37.70349 -36.72299 -35.58828 -34.88777 -32.52155 -31.11844 -30.83076 -27.04409 -25.25838 -24.25309 -22.90149 -22.62625 -21.09110 -19.36198 -18.52166 -17.46078 -17.32610 -16.70689 -16.55027 -16.45530 -15.88235 -15.45306 -15.00191 -14.84409 -14.44471 -14.31654 -13.92905 -13.24964 -13.14685 -12.97096 -12.91045 -12.80826 -12.54054 -12.37383 -12.29502 -11.80113 -11.62778 -11.52825 -11.22922 -10.61924 -10.42532 -10.21995 -9.89908 -8.24079 -6.34272 0.29528 0.65193 1.11181 1.37620 1.41723 1.43442 1.55593 1.63069 2.09757 2.42803 3.11546 3.37042 3.41481 3.86353 3.88508 4.10861 4.18636 4.25559 4.43205 4.45688 4.63695 4.72696 4.81797 5.06641 5.08488 5.11791 5.43853 5.51386 5.56099 5.77059 6.13650 6.29931 6.77356 6.78418 6.89554 7.35418 8.88000 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.022724 B = 0.004318 C = 0.003940 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1231.897326 B = 6482.352803 C = 7104.018843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C 0.104 3.896 3 N -0.258 5.258 4 N -0.274 5.274 5 C 0.029 3.971 6 C -0.127 4.127 7 Cl -0.022 7.022 8 C -0.025 4.025 9 C 0.590 3.410 10 O -0.557 6.557 11 N -0.695 5.695 12 C 0.140 3.860 13 C 0.022 3.978 14 C -0.544 4.544 15 H 0.061 0.939 16 C 0.009 3.991 17 N -0.927 5.927 18 Si 0.963 3.037 19 H -0.264 1.264 20 H -0.277 1.277 21 H -0.279 1.279 22 H 0.043 0.957 23 H 0.071 0.929 24 H 0.110 0.890 25 H 0.135 0.865 26 H 0.100 0.900 27 H 0.228 0.772 28 H 0.411 0.589 29 H 0.053 0.947 30 H 0.060 0.940 31 H 0.012 0.988 32 H 0.008 0.992 33 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.541 5.088 -15.361 18.298 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.014 4.014 3 N -0.047 5.047 4 N -0.104 5.104 5 C -0.149 4.149 6 C -0.165 4.165 7 Cl 0.006 6.994 8 C -0.156 4.156 9 C 0.373 3.627 10 O -0.434 6.434 11 N -0.345 5.345 12 C 0.017 3.983 13 C -0.015 4.015 14 C -0.582 4.582 15 H 0.079 0.921 16 C -0.190 4.190 17 N -0.566 5.566 18 Si 0.788 3.212 19 H -0.188 1.188 20 H -0.203 1.203 21 H -0.205 1.205 22 H 0.062 0.938 23 H 0.090 0.910 24 H 0.128 0.872 25 H 0.153 0.847 26 H 0.118 0.882 27 H 0.244 0.756 28 H 0.247 0.753 29 H 0.071 0.929 30 H 0.078 0.922 31 H 0.030 0.970 32 H 0.026 0.974 33 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -9.414 4.402 -15.677 18.809 hybrid contribution 0.960 0.355 1.572 1.876 sum -8.454 4.757 -14.105 17.119 Atomic orbital electron populations 1.22142 0.92323 1.05153 1.02571 1.22476 0.97149 0.74836 1.06948 1.46051 1.44687 1.12980 1.00981 1.73215 1.19331 1.04557 1.13327 1.24022 1.02487 0.96139 0.92218 1.21469 1.11118 0.90311 0.93588 1.98360 1.87239 1.42916 1.70865 1.21164 1.10344 0.94557 0.89526 1.17058 0.83317 0.77702 0.84611 1.90825 1.33130 1.56887 1.62584 1.46141 1.18087 1.57814 1.12497 1.21416 0.99653 0.98748 0.78455 1.19148 0.91165 0.95040 0.96192 1.21469 1.01876 1.39183 0.95673 0.92057 1.25835 0.95013 0.95453 1.02706 1.70063 1.06023 1.42811 1.37750 0.85421 0.78401 0.77964 0.79416 1.18839 1.20279 1.20457 0.93813 0.91039 0.87195 0.84663 0.88180 0.75612 0.75312 0.92850 0.92202 0.96975 0.97372 0.92576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.71 10.24 71.98 0.74 -1.97 16 2 C 0.10 1.87 6.91 86.38 0.60 2.47 16 3 N -0.26 -6.24 3.35 -334.60 -1.12 -7.36 16 4 N -0.27 -6.36 11.89 -57.07 -0.68 -7.04 16 5 C 0.03 0.62 12.04 85.22 1.03 1.64 16 6 C -0.13 -3.37 6.89 22.72 0.16 -3.22 16 7 Cl -0.02 -0.59 29.24 -2.72 -0.08 -0.67 16 8 C -0.03 -0.73 6.72 40.76 0.27 -0.45 16 9 C 0.59 20.24 6.91 86.55 0.60 20.84 16 10 O -0.56 -22.88 17.12 -4.19 -0.07 -22.95 16 11 N -0.70 -23.73 5.55 -466.76 -2.59 -26.32 16 12 C 0.14 5.72 5.62 86.38 0.49 6.20 16 13 C 0.02 1.07 5.09 29.85 0.15 1.22 16 14 C -0.54 -29.40 9.11 25.60 0.23 -29.16 16 15 H 0.06 3.23 7.74 -2.91 -0.02 3.21 16 16 C 0.01 0.48 5.46 84.65 0.46 0.94 16 17 N -0.93 -53.34 13.29 21.45 0.28 -53.05 16 18 Si 0.96 42.71 29.54 68.60 2.03 44.74 16 19 H -0.26 -11.33 7.11 99.48 0.71 -10.62 16 20 H -0.28 -11.96 7.11 99.48 0.71 -11.25 16 21 H -0.28 -12.12 7.11 99.48 0.71 -11.41 16 22 H 0.04 0.96 8.14 -2.39 -0.02 0.94 16 23 H 0.07 1.14 8.14 -2.39 -0.02 1.12 16 24 H 0.11 1.23 8.14 -2.39 -0.02 1.21 16 25 H 0.14 1.68 8.14 -2.39 -0.02 1.66 16 26 H 0.10 1.86 7.65 -2.39 -0.02 1.84 16 27 H 0.23 3.07 8.06 -2.91 -0.02 3.04 16 28 H 0.41 12.53 8.46 -92.71 -0.78 11.75 16 29 H 0.05 2.28 8.14 -2.38 -0.02 2.26 16 30 H 0.06 2.47 8.14 -2.39 -0.02 2.45 16 31 H 0.01 0.60 8.14 -2.39 -0.02 0.58 16 32 H 0.01 0.41 8.14 -2.39 -0.02 0.39 16 33 H 0.27 14.36 8.31 -92.71 -0.77 13.59 16 Total: -1.00 -66.24 311.62 2.84 -63.40 By element: Atomic # 1 Polarization: 10.42 SS G_CDS: 0.35 Total: 10.76 kcal Atomic # 6 Polarization: -6.22 SS G_CDS: 4.72 Total: -1.50 kcal Atomic # 7 Polarization: -89.68 SS G_CDS: -4.11 Total: -93.78 kcal Atomic # 8 Polarization: -22.88 SS G_CDS: -0.07 Total: -22.95 kcal Atomic # 14 Polarization: 42.71 SS G_CDS: 2.03 Total: 44.74 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -0.08 Total: -0.67 kcal Total: -66.24 2.84 -63.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598696534.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.959 kcal (2) G-P(sol) polarization free energy of solvation -66.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -63.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds