Wall clock time and date at job start Mon Mar 30 2020 01:22:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46498 * 109.47631 * 2 1 4 4 C 1.36855 * 120.00075 * 273.92633 * 3 2 1 5 5 H 1.07995 * 120.00343 * 178.32064 * 4 3 2 6 6 C 1.39041 * 119.99841 * 358.04878 * 4 3 2 7 7 N 1.31372 * 120.00054 * 28.22643 * 6 4 3 8 8 Si 1.86797 * 119.99830 * 208.22979 * 6 4 3 9 9 H 1.48502 * 109.47526 * 60.00154 * 8 6 4 10 10 H 1.48505 * 109.47016 * 179.97438 * 8 6 4 11 11 H 1.48498 * 109.47396 * 299.99479 * 8 6 4 12 12 C 1.34772 * 120.00025 * 93.91904 * 3 2 1 13 13 O 1.21691 * 120.00049 * 176.18532 * 12 3 2 14 14 C 1.46891 * 120.00261 * 356.18663 * 12 3 2 15 15 C 1.38658 * 126.91916 * 259.99047 * 14 12 3 16 16 Cl 1.73606 * 127.33619 * 0.02562 * 15 14 12 17 17 C 1.39771 * 105.32198 * 179.97438 * 15 14 12 18 18 N 1.30856 * 107.89372 * 359.97438 * 17 15 14 19 19 N 1.28444 * 110.99975 * 359.74021 * 18 17 15 20 20 C 1.46498 * 125.18772 * 180.25283 * 19 18 17 21 21 C 1.52999 * 109.47352 * 275.45089 * 20 19 18 22 22 H 1.08999 * 109.47158 * 291.70884 * 1 2 3 23 23 H 1.08996 * 109.47001 * 51.70895 * 1 2 3 24 24 H 1.08999 * 109.47012 * 171.70509 * 1 2 3 25 25 H 1.09000 * 109.47266 * 239.99619 * 2 1 3 26 26 H 1.09003 * 109.47174 * 120.00178 * 2 1 3 27 27 H 0.97003 * 120.00395 * 180.02562 * 7 6 4 28 28 H 1.07994 * 126.05708 * 179.97438 * 17 15 14 29 29 H 1.09001 * 109.47451 * 35.45729 * 20 19 18 30 30 H 1.09001 * 109.46834 * 155.45480 * 20 19 18 31 31 H 1.08997 * 109.47115 * 304.82337 * 21 20 19 32 32 H 1.09002 * 109.47006 * 64.82195 * 21 20 19 33 33 H 1.08996 * 109.47584 * 184.82160 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.1701 2.0533 -1.1824 5 1 2.5042 3.0803 -1.1808 6 6 1.8993 1.4123 -2.3862 7 7 1.0188 0.4383 -2.4281 8 14 2.7877 1.9361 -3.9436 9 1 4.2508 1.7570 -3.7631 10 1 2.3244 1.1024 -5.0819 11 1 2.4947 3.3645 -4.2242 12 6 2.3183 1.9899 1.1644 13 8 2.7894 3.1119 1.1608 14 6 2.0766 1.2990 2.4380 15 6 1.0014 1.4825 3.2941 16 17 -0.3354 2.5707 3.0874 17 6 1.2226 0.6038 4.3584 18 7 2.3411 -0.0347 4.1268 19 7 2.8633 0.3401 3.0148 20 6 4.1132 -0.1772 2.4523 21 6 5.2966 0.5832 3.0541 22 1 -0.3633 0.3801 0.9548 23 1 -0.3633 0.6368 -0.8066 24 1 -0.3633 -1.0169 -0.1483 25 1 1.8933 -0.5139 -0.8899 26 1 1.8933 -0.5139 0.8900 27 1 0.8301 -0.0092 -3.2679 28 1 0.5836 0.4747 5.2194 29 1 4.2056 -1.2378 2.6866 30 1 4.1076 -0.0434 1.3705 31 1 5.1606 1.6527 2.8938 32 1 5.3528 0.3803 4.1236 33 1 6.2195 0.2583 2.5738 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000598807242.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:22:34 Heat of formation + Delta-G solvation = 53.240401 kcal Electronic energy + Delta-G solvation = -19632.395229 eV Core-core repulsion = 16528.879901 eV Total energy + Delta-G solvation = -3103.515328 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -42.13945 -38.38450 -36.05429 -35.20921 -34.24806 -32.01134 -30.11430 -29.50935 -29.46045 -25.39828 -23.91038 -22.46157 -21.93388 -20.97680 -18.98888 -17.40264 -16.85398 -15.78517 -15.46515 -14.91982 -14.63709 -14.19256 -13.90556 -13.66336 -13.39117 -12.82783 -12.65415 -12.59841 -12.05191 -11.90913 -11.50669 -11.37927 -11.26672 -11.14991 -11.03340 -10.83415 -10.47039 -10.29969 -10.02230 -9.97343 -8.97703 -8.89921 -8.66681 -8.19247 -8.00754 -6.55820 -3.91369 2.08848 2.30691 2.87748 3.00494 3.12909 3.17046 3.22770 3.66134 3.98758 4.61620 4.74298 4.88003 5.04210 5.22610 5.31852 5.34695 5.62355 5.70132 5.87248 5.96225 6.04433 6.16475 6.53844 6.58647 6.61775 6.79662 7.05789 7.15624 7.35858 7.66086 7.89956 8.31917 8.34468 8.97813 9.21395 9.77461 10.41898 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.019717 B = 0.007847 C = 0.006768 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1419.719016 B = 3567.288312 C = 4136.372700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C 0.119 3.881 3 N -0.412 5.412 4 C -0.312 4.312 5 H 0.111 0.889 6 C 0.038 3.962 7 N -0.848 5.848 8 Si 0.920 3.080 9 H -0.272 1.272 10 H -0.283 1.283 11 H -0.271 1.271 12 C 0.487 3.513 13 O -0.575 6.575 14 C 0.049 3.951 15 C -0.135 4.135 16 Cl -0.032 7.032 17 C 0.017 3.983 18 N -0.293 5.293 19 N -0.275 5.275 20 C 0.118 3.882 21 C -0.168 4.168 22 H 0.025 0.975 23 H 0.092 0.908 24 H 0.038 0.962 25 H 0.102 0.898 26 H 0.027 0.973 27 H 0.271 0.729 28 H 0.186 0.814 29 H 0.100 0.900 30 H 0.103 0.897 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.820 -4.740 6.759 8.454 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.004 4.004 3 N -0.129 5.129 4 C -0.439 4.439 5 H 0.128 0.872 6 C -0.168 4.168 7 N -0.486 5.486 8 Si 0.746 3.254 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.196 1.196 12 C 0.273 3.727 13 O -0.459 6.459 14 C -0.081 4.081 15 C -0.172 4.172 16 Cl -0.003 7.003 17 C -0.162 4.162 18 N -0.122 5.122 19 N -0.064 5.064 20 C -0.002 4.002 21 C -0.226 4.226 22 H 0.044 0.956 23 H 0.110 0.890 24 H 0.057 0.943 25 H 0.120 0.880 26 H 0.046 0.954 27 H 0.082 0.918 28 H 0.203 0.797 29 H 0.118 0.882 30 H 0.121 0.879 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.711 -5.127 6.928 9.035 hybrid contribution -0.527 0.702 -1.030 1.353 sum 2.183 -4.425 5.898 7.690 Atomic orbital electron populations 1.21985 0.95700 1.00944 1.00987 1.21654 0.95707 0.83047 1.00025 1.43857 1.52786 1.11582 1.04657 1.19711 1.43681 0.99239 0.81313 0.87157 1.25287 0.95440 0.96528 0.99507 1.70248 1.26295 1.24263 1.27776 0.86086 0.80273 0.79013 0.80011 1.19769 1.20885 1.19575 1.16419 0.88625 0.86521 0.81182 1.90680 1.50254 1.19329 1.85667 1.21906 0.93130 0.94795 0.98315 1.21096 0.94261 1.02852 0.99013 1.98311 1.42756 1.62029 1.97227 1.23309 0.95767 0.97046 1.00105 1.73063 1.11147 1.24486 1.03542 1.45789 1.18712 1.27532 1.14348 1.21992 0.79428 0.99418 0.99378 1.22143 0.96849 1.01912 1.01678 0.95636 0.88958 0.94325 0.88010 0.95430 0.91816 0.79724 0.88182 0.87889 0.91159 0.91653 0.90219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.99 9.43 37.16 0.35 -2.64 16 2 C 0.12 2.62 5.23 -4.04 -0.02 2.60 16 3 N -0.41 -10.17 2.62 -116.23 -0.30 -10.47 16 4 C -0.31 -8.20 9.43 -15.01 -0.14 -8.34 16 5 H 0.11 3.08 7.30 -52.49 -0.38 2.70 16 6 C 0.04 0.92 4.99 -17.45 -0.09 0.83 16 7 N -0.85 -20.34 8.25 55.50 0.46 -19.89 16 8 Si 0.92 19.27 29.63 -169.99 -5.04 14.23 16 9 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 10 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 11 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 12 C 0.49 12.01 6.72 -12.76 -0.09 11.93 16 13 O -0.58 -16.13 16.69 5.20 0.09 -16.04 16 14 C 0.05 1.04 5.02 -82.00 -0.41 0.63 16 15 C -0.13 -2.64 6.89 -38.85 -0.27 -2.91 16 16 Cl -0.03 -0.59 29.24 -51.86 -1.52 -2.11 16 17 C 0.02 0.28 12.03 -17.39 -0.21 0.07 16 18 N -0.29 -5.10 11.89 30.61 0.36 -4.74 16 19 N -0.28 -5.02 2.94 -57.11 -0.17 -5.18 16 20 C 0.12 1.75 6.42 -4.04 -0.03 1.72 16 21 C -0.17 -2.21 10.24 37.16 0.38 -1.83 16 22 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 23 H 0.09 2.24 6.43 -51.93 -0.33 1.90 16 24 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 25 H 0.10 2.34 5.94 -51.93 -0.31 2.03 16 26 H 0.03 0.56 5.74 -51.93 -0.30 0.26 16 27 H 0.27 6.17 8.31 -40.82 -0.34 5.83 16 28 H 0.19 2.38 8.06 -52.49 -0.42 1.96 16 29 H 0.10 1.21 8.14 -51.93 -0.42 0.78 16 30 H 0.10 1.64 7.42 -51.93 -0.39 1.26 16 31 H 0.07 1.11 8.14 -51.93 -0.42 0.68 16 32 H 0.06 0.81 8.14 -51.93 -0.42 0.39 16 33 H 0.08 0.83 8.14 -51.93 -0.42 0.41 16 LS Contribution 297.05 15.07 4.48 4.48 Total: -1.00 -29.10 297.05 -5.96 -35.07 By element: Atomic # 1 Polarization: 6.38 SS G_CDS: -3.80 Total: 2.58 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -0.52 Total: 2.08 kcal Atomic # 7 Polarization: -40.63 SS G_CDS: 0.35 Total: -40.28 kcal Atomic # 8 Polarization: -16.13 SS G_CDS: 0.09 Total: -16.04 kcal Atomic # 14 Polarization: 19.27 SS G_CDS: -5.04 Total: 14.23 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.52 Total: -2.11 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -29.10 -5.96 -35.07 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598807242.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.308 kcal (2) G-P(sol) polarization free energy of solvation -29.104 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.964 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.068 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds