Wall clock time and date at job start Mon Mar 30 2020 01:26:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46494 * 109.47299 * 2 1 4 4 C 1.46500 * 119.99932 * 274.92334 * 3 2 1 5 5 C 1.50704 * 109.46847 * 263.60840 * 4 3 2 6 6 H 1.08000 * 120.00336 * 0.02562 * 5 4 3 7 7 C 1.37877 * 119.99990 * 179.97438 * 5 4 3 8 8 N 1.31514 * 120.00036 * 0.02562 * 7 5 4 9 9 Si 1.86803 * 120.00028 * 180.02562 * 7 5 4 10 10 H 1.48500 * 109.46829 * 0.02562 * 9 7 5 11 11 H 1.48498 * 109.47318 * 120.00495 * 9 7 5 12 12 H 1.48504 * 109.46903 * 240.00354 * 9 7 5 13 13 C 1.34777 * 120.00486 * 94.92041 * 3 2 1 14 14 O 1.21583 * 119.99548 * 4.29915 * 13 3 2 15 15 C 1.47662 * 120.00538 * 184.30627 * 13 3 2 16 16 N 1.31828 * 126.46120 * 354.53082 * 15 13 3 17 17 N 1.28465 * 110.13702 * 180.25577 * 16 15 13 18 18 C 1.46500 * 124.93726 * 179.71300 * 17 16 15 19 19 C 1.35648 * 110.12935 * 359.73140 * 17 16 15 20 20 C 1.35461 * 107.13202 * 0.02562 * 19 17 16 21 21 Cl 1.73602 * 127.23567 * 179.97438 * 20 19 17 22 22 H 1.08995 * 109.47135 * 180.02562 * 1 2 3 23 23 H 1.09003 * 109.46725 * 299.99743 * 1 2 3 24 24 H 1.09000 * 109.47179 * 59.99511 * 1 2 3 25 25 H 1.09003 * 109.46725 * 240.00257 * 2 1 3 26 26 H 1.09000 * 109.47179 * 120.00489 * 2 1 3 27 27 H 1.09000 * 109.47730 * 23.60847 * 4 3 2 28 28 H 1.09000 * 109.47561 * 143.61318 * 4 3 2 29 29 H 0.97003 * 120.00295 * 180.02562 * 8 7 5 30 30 H 1.08998 * 109.47185 * 270.02295 * 18 17 16 31 31 H 1.09000 * 109.46845 * 30.02192 * 18 17 16 32 32 H 1.08997 * 109.47455 * 150.01948 * 18 17 16 33 33 H 1.08006 * 126.42919 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3811 0.0000 4 6 2.1599 2.1080 -1.2641 5 6 3.5868 2.0151 -1.7398 6 1 4.3153 1.4689 -1.1590 7 6 3.9622 2.6266 -2.9172 8 7 3.0750 3.2913 -3.6249 9 14 5.7307 2.5109 -3.5073 10 1 6.5244 1.7126 -2.5388 11 1 5.7666 1.8523 -4.8378 12 1 6.3070 3.8753 -3.6148 13 6 2.3374 1.9832 1.1628 14 8 2.2948 1.3562 2.2037 15 6 2.7386 3.4042 1.1729 16 7 2.9250 4.1731 0.1184 17 7 3.2741 5.3530 0.4876 18 6 3.5692 6.4635 -0.4212 19 6 3.3303 5.4212 1.8412 20 6 2.9924 4.1986 2.3166 21 17 2.8971 3.7075 3.9790 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5138 0.8901 24 1 -0.3633 0.5139 -0.8899 25 1 1.8933 -0.5138 -0.8901 26 1 1.8934 -0.5139 0.8899 27 1 1.4985 1.6697 -2.0114 28 1 1.8947 3.1544 -1.1132 29 1 3.3389 3.7212 -4.4534 30 1 4.6295 6.4548 -0.6733 31 1 2.9785 6.3552 -1.3309 32 1 3.3188 7.4067 0.0643 33 1 3.5949 6.2875 2.4293 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000599137865.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:29 Heat of formation + Delta-G solvation = 52.044690 kcal Electronic energy + Delta-G solvation = -19295.387310 eV Core-core repulsion = 16191.820132 eV Total energy + Delta-G solvation = -3103.567177 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.14051 -38.65755 -36.09287 -35.05456 -33.03794 -32.56815 -30.64295 -29.81533 -27.15781 -26.73772 -23.44325 -22.94451 -21.17141 -21.02856 -18.59204 -16.94264 -16.39179 -16.03922 -15.73240 -15.26081 -14.39005 -14.21329 -14.08232 -13.58536 -13.07105 -12.78473 -12.69151 -12.44088 -12.19520 -11.88495 -11.69275 -11.49230 -11.40849 -10.97198 -10.86015 -10.52656 -10.38614 -10.08392 -9.70503 -9.51873 -9.10638 -8.79896 -8.37577 -8.33628 -7.56436 -6.03046 -4.04208 2.21442 2.34034 2.36664 3.17991 3.23804 3.32852 3.39447 4.01312 4.16585 4.43956 4.82869 4.98357 5.30445 5.31307 5.36927 5.59937 5.69324 5.76186 5.84947 5.89452 5.97239 6.33109 6.40497 6.57383 6.71937 6.93134 7.01073 7.52595 7.78953 7.90582 8.27084 8.34606 8.46972 8.97702 9.13019 9.58309 11.04609 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.014828 B = 0.008958 C = 0.006430 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1887.844333 B = 3125.051887 C = 4353.308894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.114 3.886 3 N -0.585 5.585 4 C 0.229 3.771 5 C -0.507 4.507 6 H 0.053 0.947 7 C 0.068 3.932 8 N -0.893 5.893 9 Si 0.885 3.115 10 H -0.275 1.275 11 H -0.284 1.284 12 H -0.286 1.286 13 C 0.597 3.403 14 O -0.557 6.557 15 C -0.004 4.004 16 N -0.171 5.171 17 N -0.288 5.288 18 C 0.093 3.907 19 C -0.024 4.024 20 C -0.106 4.106 21 Cl -0.027 7.027 22 H 0.057 0.943 23 H 0.052 0.948 24 H 0.056 0.944 25 H 0.075 0.925 26 H 0.076 0.924 27 H 0.030 0.970 28 H 0.069 0.931 29 H 0.259 0.741 30 H 0.083 0.917 31 H 0.104 0.896 32 H 0.089 0.911 33 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.440 6.090 6.977 9.372 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.010 4.010 3 N -0.315 5.315 4 C 0.109 3.891 5 C -0.546 4.546 6 H 0.072 0.928 7 C -0.133 4.133 8 N -0.532 5.532 9 Si 0.713 3.287 10 H -0.199 1.199 11 H -0.211 1.211 12 H -0.212 1.212 13 C 0.383 3.617 14 O -0.435 6.435 15 C -0.165 4.165 16 N -0.006 5.006 17 N -0.077 5.077 18 C -0.047 4.047 19 C -0.167 4.167 20 C -0.144 4.144 21 Cl 0.001 6.999 22 H 0.076 0.924 23 H 0.071 0.929 24 H 0.075 0.925 25 H 0.094 0.906 26 H 0.094 0.906 27 H 0.048 0.952 28 H 0.087 0.913 29 H 0.068 0.932 30 H 0.101 0.899 31 H 0.122 0.878 32 H 0.107 0.893 33 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -1.500 5.924 6.206 8.710 hybrid contribution 1.217 0.156 0.359 1.279 sum -0.283 6.080 6.565 8.953 Atomic orbital electron populations 1.22118 0.96787 1.01210 1.02015 1.21281 0.93424 0.83579 1.02679 1.48147 1.61747 1.13383 1.08203 1.19825 0.97066 0.93638 0.78599 1.21389 0.94815 1.32237 1.06149 0.92835 1.24769 0.96798 0.95278 0.96462 1.69946 1.33292 1.34947 1.15057 0.86650 0.85681 0.77666 0.78666 1.19950 1.21053 1.21215 1.16826 0.77274 0.83753 0.83809 1.90711 1.55939 1.64589 1.32303 1.21918 1.09861 0.96393 0.88285 1.74724 1.12171 0.90189 1.23521 1.45751 1.47408 1.09814 1.04736 1.22123 1.03624 0.84852 0.94117 1.22455 1.09545 0.99403 0.85317 1.20766 1.12459 0.94004 0.87194 1.98310 1.97170 1.91479 1.12911 0.92360 0.92890 0.92484 0.90616 0.90605 0.95170 0.91340 0.93167 0.89881 0.87772 0.89279 0.80176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.69 10.24 37.16 0.38 -2.31 16 2 C 0.11 2.20 6.18 -4.04 -0.03 2.17 16 3 N -0.58 -13.30 2.47 -176.24 -0.44 -13.74 16 4 C 0.23 5.69 4.79 -5.19 -0.02 5.66 16 5 C -0.51 -13.59 8.49 -34.44 -0.29 -13.89 16 6 H 0.05 1.51 7.81 -52.49 -0.41 1.10 16 7 C 0.07 1.82 5.46 -17.82 -0.10 1.72 16 8 N -0.89 -24.30 13.29 55.43 0.74 -23.57 16 9 Si 0.89 20.93 29.54 -169.99 -5.02 15.91 16 10 H -0.27 -6.62 7.11 56.52 0.40 -6.22 16 11 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 12 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 13 C 0.60 13.93 7.62 -12.41 -0.09 13.84 16 14 O -0.56 -13.39 15.38 5.29 0.08 -13.31 16 15 C 0.00 -0.08 6.81 -82.76 -0.56 -0.64 16 16 N -0.17 -3.68 7.83 33.42 0.26 -3.42 16 17 N -0.29 -4.86 3.72 -67.94 -0.25 -5.12 16 18 C 0.09 1.13 11.32 59.85 0.68 1.80 16 19 C -0.02 -0.37 11.49 -16.86 -0.19 -0.56 16 20 C -0.11 -1.98 6.80 -39.31 -0.27 -2.25 16 21 Cl -0.03 -0.47 28.19 -51.86 -1.46 -1.93 16 22 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 23 H 0.05 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.08 1.42 8.11 -51.93 -0.42 1.00 16 26 H 0.08 1.46 7.23 -51.93 -0.38 1.08 16 27 H 0.03 0.78 8.02 -51.93 -0.42 0.37 16 28 H 0.07 1.78 5.31 -51.93 -0.28 1.50 16 29 H 0.26 6.70 8.31 -40.82 -0.34 6.37 16 30 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 31 H 0.10 1.39 8.14 -51.93 -0.42 0.97 16 32 H 0.09 0.69 8.13 -51.93 -0.42 0.27 16 33 H 0.18 1.89 8.06 -52.48 -0.42 1.46 16 LS Contribution 302.61 15.07 4.56 4.56 Total: -1.00 -31.73 302.61 -6.03 -37.76 By element: Atomic # 1 Polarization: 1.30 SS G_CDS: -3.99 Total: -2.70 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: -0.50 Total: 5.55 kcal Atomic # 7 Polarization: -46.15 SS G_CDS: 0.31 Total: -45.84 kcal Atomic # 8 Polarization: -13.39 SS G_CDS: 0.08 Total: -13.31 kcal Atomic # 14 Polarization: 20.93 SS G_CDS: -5.02 Total: 15.91 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -1.46 Total: -1.93 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -31.73 -6.03 -37.76 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000599137865.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.803 kcal (2) G-P(sol) polarization free energy of solvation -31.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.758 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds