Wall clock time and date at job start Mon Mar 30 2020 01:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.09001 * 109.47105 * 2 1 4 4 C 1.50700 * 109.46880 * 240.00287 * 2 1 3 5 5 H 1.08004 * 119.99696 * 274.68769 * 4 2 1 6 6 C 1.37879 * 120.00210 * 94.69202 * 4 2 1 7 7 N 1.31516 * 119.99797 * 184.44784 * 6 4 2 8 8 Si 1.86796 * 119.99778 * 4.44880 * 6 4 2 9 9 H 1.48502 * 109.47199 * 94.35304 * 8 6 4 10 10 H 1.48506 * 109.47017 * 214.35080 * 8 6 4 11 11 H 1.48501 * 109.47221 * 334.35139 * 8 6 4 12 12 N 1.46493 * 109.47308 * 120.00091 * 2 1 3 13 13 C 1.46497 * 120.00265 * 60.00109 * 12 2 1 14 14 C 1.34777 * 119.99989 * 239.99713 * 12 2 1 15 15 O 1.21577 * 119.99979 * 2.73098 * 14 12 2 16 16 C 1.47673 * 120.00208 * 182.72590 * 14 12 2 17 17 N 1.31828 * 126.45902 * 355.20049 * 16 14 12 18 18 N 1.28463 * 110.13516 * 180.14557 * 17 16 14 19 19 C 1.46503 * 124.93608 * 179.88133 * 18 17 16 20 20 C 1.35649 * 110.13301 * 359.61855 * 18 17 16 21 21 C 1.35465 * 107.12893 * 0.22997 * 20 18 17 22 22 Cl 1.73594 * 127.23671 * 180.02562 * 21 20 18 23 23 H 1.09007 * 109.47045 * 294.95472 * 1 2 3 24 24 H 1.08993 * 109.47634 * 54.95286 * 1 2 3 25 25 H 1.09009 * 109.47109 * 174.95650 * 1 2 3 26 26 H 0.97002 * 119.99230 * 179.97438 * 7 6 4 27 27 H 1.09001 * 109.47412 * 263.88487 * 13 12 2 28 28 H 1.09003 * 109.46959 * 23.88435 * 13 12 2 29 29 H 1.09001 * 109.47692 * 143.88284 * 13 12 2 30 30 H 1.08996 * 109.47493 * 269.69912 * 19 18 17 31 31 H 1.08996 * 109.46761 * 29.69866 * 19 18 17 32 32 H 1.08998 * 109.47043 * 149.69395 * 19 18 17 33 33 H 1.07998 * 126.43628 * 180.23102 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0322 -0.7104 -1.2305 5 1 2.1401 -1.7850 -1.2274 6 6 2.3541 0.0116 -2.3602 7 7 2.7086 -0.6139 -3.4615 8 14 2.2867 1.8780 -2.3265 9 1 3.6346 2.4164 -2.0128 10 1 1.8490 2.3816 -3.6533 11 1 1.3228 2.3199 -1.2868 12 7 2.0183 -0.6906 1.1961 13 6 1.6645 -2.0931 1.4280 14 6 2.7932 -0.0356 2.0832 15 8 3.0460 1.1418 1.9166 16 6 3.3351 -0.7481 3.2577 17 7 3.0728 -1.9912 3.6096 18 7 3.7101 -2.2904 4.6842 19 6 3.6514 -3.5886 5.3604 20 6 4.4497 -1.2315 5.0986 21 6 4.2381 -0.2267 4.2150 22 17 4.9296 1.3652 4.2491 23 1 -0.3633 0.4336 0.9318 24 1 -0.3634 0.5901 -0.8412 25 1 -0.3634 -1.0238 -0.0904 26 1 2.9346 -0.1060 -4.2563 27 1 0.7998 -2.1452 2.0896 28 1 1.4237 -2.5690 0.4773 29 1 2.5066 -2.6089 1.8894 30 1 2.8459 -3.5799 6.0947 31 1 3.4653 -4.3725 4.6264 32 1 4.5994 -3.7795 5.8634 33 1 5.0876 -1.1961 5.9694 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000599329158.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:20:49 Heat of formation + Delta-G solvation = 57.509404 kcal Electronic energy + Delta-G solvation = -18964.591904 eV Core-core repulsion = 15861.261694 eV Total energy + Delta-G solvation = -3103.330210 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -42.62790 -38.77706 -36.34034 -35.30274 -33.52420 -32.50988 -30.85096 -30.02311 -27.40219 -26.03954 -25.19270 -23.13883 -21.50879 -20.54986 -18.67301 -17.28676 -17.03523 -16.44359 -15.98232 -15.37947 -14.58212 -14.44639 -13.96376 -13.70021 -13.14444 -13.11419 -12.85470 -12.44784 -12.27430 -12.21435 -12.03983 -11.72187 -11.35414 -11.02003 -10.83629 -10.68019 -10.40369 -10.24164 -9.66953 -9.29499 -9.20127 -9.08069 -8.71461 -8.54477 -7.55446 -6.11524 -4.13254 1.67873 1.98045 2.01850 2.76658 3.35811 3.44664 3.52080 3.82947 3.98522 4.34599 4.44317 4.61013 4.79787 4.93636 5.07833 5.22216 5.30253 5.46325 5.95321 6.14881 6.21842 6.37615 6.45971 6.49848 6.64287 6.76371 7.00965 7.16798 7.55048 7.70384 7.82210 8.22276 8.55716 8.90109 8.99888 9.51267 11.00349 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.022304 B = 0.006342 C = 0.005441 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1255.096202 B = 4413.687822 C = 5144.751653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C 0.220 3.780 3 H 0.069 0.931 4 C -0.523 4.523 5 H 0.079 0.921 6 C 0.079 3.921 7 N -0.893 5.893 8 Si 0.872 3.128 9 H -0.273 1.273 10 H -0.287 1.287 11 H -0.258 1.258 12 N -0.572 5.572 13 C 0.082 3.918 14 C 0.582 3.418 15 O -0.536 6.536 16 C 0.017 3.983 17 N -0.244 5.244 18 N -0.292 5.292 19 C 0.091 3.909 20 C -0.009 4.009 21 C -0.105 4.105 22 Cl -0.013 7.013 23 H 0.026 0.974 24 H 0.055 0.945 25 H 0.049 0.951 26 H 0.266 0.734 27 H 0.040 0.960 28 H 0.076 0.924 29 H 0.079 0.921 30 H 0.085 0.915 31 H 0.099 0.901 32 H 0.095 0.905 33 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.040 -5.552 19.496 20.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C 0.120 3.880 3 H 0.086 0.914 4 C -0.561 4.561 5 H 0.097 0.903 6 C -0.124 4.124 7 N -0.530 5.530 8 Si 0.699 3.301 9 H -0.198 1.198 10 H -0.213 1.213 11 H -0.183 1.183 12 N -0.302 5.302 13 C -0.062 4.062 14 C 0.366 3.634 15 O -0.412 6.412 16 C -0.145 4.145 17 N -0.079 5.079 18 N -0.079 5.079 19 C -0.049 4.049 20 C -0.153 4.153 21 C -0.142 4.142 22 Cl 0.015 6.985 23 H 0.045 0.955 24 H 0.074 0.926 25 H 0.068 0.932 26 H 0.075 0.925 27 H 0.059 0.941 28 H 0.095 0.905 29 H 0.097 0.903 30 H 0.104 0.896 31 H 0.118 0.882 32 H 0.113 0.887 33 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 1.644 -5.845 18.930 19.880 hybrid contribution 0.614 1.490 0.235 1.628 sum 2.258 -4.356 19.165 19.783 Atomic orbital electron populations 1.22197 0.98194 1.00878 0.99097 1.19452 0.90935 0.95172 0.82438 0.91366 1.21132 1.44593 0.95756 0.94634 0.90347 1.24949 0.93735 0.98525 0.95213 1.69898 1.45302 1.36000 1.01757 0.86900 0.79757 0.86147 0.77280 1.19819 1.21295 1.18282 1.48200 1.47632 1.12161 1.22186 1.21893 1.00291 0.82565 1.01436 1.16933 0.79688 0.85954 0.80793 1.90769 1.60243 1.14854 1.75339 1.22325 1.01788 0.90893 0.99475 1.73983 1.17958 1.15265 1.00737 1.45538 1.32104 1.12036 1.18263 1.22171 1.04321 0.80463 0.97990 1.22530 1.02607 0.87489 1.02625 1.20838 1.03971 0.90459 0.98960 1.98351 1.82500 1.19515 1.98096 0.95450 0.92624 0.93158 0.92460 0.94137 0.90526 0.90283 0.89649 0.88234 0.88682 0.79555 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.18 9.10 37.15 0.34 -2.84 16 2 C 0.22 5.54 2.25 -69.09 -0.16 5.39 16 3 H 0.07 1.87 3.87 -51.93 -0.20 1.66 16 4 C -0.52 -14.75 8.69 -34.44 -0.30 -15.05 16 5 H 0.08 2.34 6.91 -52.48 -0.36 1.97 16 6 C 0.08 2.32 5.47 -17.82 -0.10 2.22 16 7 N -0.89 -27.22 13.96 55.43 0.77 -26.45 16 8 Si 0.87 22.57 27.28 -169.99 -4.64 17.93 16 9 H -0.27 -7.20 7.11 56.52 0.40 -6.80 16 10 H -0.29 -7.19 7.11 56.52 0.40 -6.79 16 11 H -0.26 -6.49 6.41 56.52 0.36 -6.13 16 12 N -0.57 -12.99 2.75 -176.45 -0.49 -13.47 16 13 C 0.08 1.54 8.71 59.85 0.52 2.07 16 14 C 0.58 13.26 7.68 -12.41 -0.10 13.16 16 15 O -0.54 -13.64 15.22 5.30 0.08 -13.56 16 16 C 0.02 0.31 6.83 -82.76 -0.57 -0.25 16 17 N -0.24 -3.81 8.48 33.42 0.28 -3.53 16 18 N -0.29 -3.33 3.72 -67.94 -0.25 -3.58 16 19 C 0.09 0.50 11.32 59.85 0.68 1.18 16 20 C -0.01 -0.10 11.49 -16.85 -0.19 -0.29 16 21 C -0.10 -1.68 6.80 -39.31 -0.27 -1.95 16 22 Cl -0.01 -0.21 28.19 -51.86 -1.46 -1.68 16 23 H 0.03 0.55 8.14 -51.92 -0.42 0.12 16 24 H 0.05 1.21 8.14 -51.93 -0.42 0.79 16 25 H 0.05 1.03 7.84 -51.92 -0.41 0.62 16 26 H 0.27 7.61 8.31 -40.82 -0.34 7.27 16 27 H 0.04 0.68 8.14 -51.93 -0.42 0.26 16 28 H 0.08 1.50 6.64 -51.93 -0.34 1.15 16 29 H 0.08 1.40 5.37 -51.93 -0.28 1.13 16 30 H 0.08 0.34 8.14 -51.93 -0.42 -0.08 16 31 H 0.10 0.52 8.14 -51.93 -0.42 0.09 16 32 H 0.09 0.25 8.13 -51.93 -0.42 -0.17 16 33 H 0.19 1.30 8.06 -52.49 -0.42 0.88 16 LS Contribution 294.39 15.07 4.44 4.44 Total: -1.00 -35.17 294.39 -5.13 -40.30 By element: Atomic # 1 Polarization: -0.28 SS G_CDS: -3.73 Total: -4.01 kcal Atomic # 6 Polarization: 3.75 SS G_CDS: -0.14 Total: 3.62 kcal Atomic # 7 Polarization: -47.35 SS G_CDS: 0.32 Total: -47.03 kcal Atomic # 8 Polarization: -13.64 SS G_CDS: 0.08 Total: -13.56 kcal Atomic # 14 Polarization: 22.57 SS G_CDS: -4.64 Total: 17.93 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.46 Total: -1.68 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -35.17 -5.13 -40.30 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000599329158.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.810 kcal (2) G-P(sol) polarization free energy of solvation -35.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.636 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.127 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.301 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds