Wall clock time and date at job start Mon Mar 30 2020 01:28:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35635 * 124.93537 * 2 1 4 4 C 1.35468 * 107.13329 * 180.02562 * 3 2 1 5 5 Cl 1.73599 * 127.23872 * 179.97438 * 4 3 2 6 6 C 1.41551 * 105.51887 * 0.24082 * 4 3 2 7 7 C 1.47663 * 126.45810 * 179.76326 * 6 4 3 8 8 O 1.21571 * 120.00309 * 359.97438 * 7 6 4 9 9 N 1.34774 * 119.99780 * 179.97438 * 7 6 4 10 10 C 1.46499 * 120.00115 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.47226 * 179.97438 * 10 9 7 12 12 C 1.53009 * 109.46895 * 179.97438 * 11 10 9 13 13 C 1.50706 * 109.46710 * 180.02562 * 12 11 10 14 14 H 1.07992 * 120.00082 * 0.02562 * 13 12 11 15 15 C 1.37871 * 119.99610 * 180.02562 * 13 12 11 16 16 N 1.31514 * 120.00221 * 359.97438 * 15 13 12 17 17 Si 1.86799 * 119.99904 * 179.97438 * 15 13 12 18 18 H 1.48495 * 109.47265 * 359.97438 * 17 15 13 19 19 H 1.48504 * 109.47134 * 120.00076 * 17 15 13 20 20 H 1.48499 * 109.47290 * 239.99624 * 17 15 13 21 21 N 1.28467 * 124.93111 * 180.02562 * 2 1 3 22 22 H 1.09000 * 109.47051 * 89.99788 * 1 2 3 23 23 H 1.08998 * 109.47295 * 210.00234 * 1 2 3 24 24 H 1.09003 * 109.46993 * 329.99684 * 1 2 3 25 25 H 1.07998 * 126.43625 * 0.05137 * 3 2 1 26 26 H 0.97007 * 120.00282 * 0.02562 * 9 7 6 27 27 H 1.09000 * 109.46837 * 299.99839 * 10 9 7 28 28 H 1.09003 * 109.46919 * 60.00084 * 10 9 7 29 29 H 1.08992 * 109.47353 * 300.00044 * 11 10 9 30 30 H 1.09003 * 109.46980 * 60.00272 * 11 10 9 31 31 H 1.09000 * 109.47224 * 300.00024 * 12 11 10 32 32 H 1.09003 * 109.46863 * 60.00472 * 12 11 10 33 33 H 0.97004 * 120.00377 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2417 1.1119 0.0000 4 6 3.5316 0.6978 -0.0006 5 17 4.9543 1.6925 -0.0015 6 6 3.4752 -0.7166 -0.0067 7 6 4.6269 -1.6407 -0.0144 8 8 5.7599 -1.1999 -0.0166 9 7 4.4220 -2.9727 -0.0191 10 6 5.5646 -3.8896 -0.0263 11 6 5.0597 -5.3338 -0.0299 12 6 6.2531 -6.2913 -0.0380 13 6 5.7556 -7.7139 -0.0422 14 1 4.6946 -7.9149 -0.0398 15 6 6.6552 -8.7587 -0.0491 16 7 7.9474 -8.5139 -0.0526 17 14 6.0387 -10.5220 -0.0536 18 1 4.5538 -10.5272 -0.0480 19 1 6.5321 -11.2158 -1.2704 20 1 6.5403 -11.2249 1.1545 21 7 2.2006 -1.0532 -0.0005 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8899 0.5139 24 1 -0.3633 0.8900 0.5139 25 1 1.8968 2.1353 0.0008 26 1 3.5180 -3.3245 -0.0178 27 1 6.1668 -3.7126 -0.9175 28 1 6.1723 -3.7197 0.8626 29 1 4.4577 -5.5105 0.8614 30 1 4.4518 -5.5040 -0.9186 31 1 6.8547 -6.1146 -0.9296 32 1 6.8613 -6.1213 0.8504 33 1 8.5803 -9.2489 -0.0578 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000599341595.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:28:51 Heat of formation + Delta-G solvation = 24.896030 kcal Electronic energy + Delta-G solvation = -17546.908352 eV Core-core repulsion = 14442.163921 eV Total energy + Delta-G solvation = -3104.744432 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -42.95168 -39.12518 -36.62611 -35.32984 -33.76858 -33.21036 -31.31472 -30.76252 -28.10893 -26.50284 -23.77545 -22.26902 -21.86098 -20.60736 -19.81342 -18.06593 -16.72302 -16.67202 -16.35359 -15.32178 -15.14797 -14.88202 -14.42081 -14.20486 -13.91768 -13.44609 -13.22943 -13.18867 -12.25516 -12.01838 -11.84247 -11.71541 -11.66497 -10.89423 -10.80307 -10.67047 -10.54555 -9.97352 -9.81907 -9.61870 -9.37219 -9.07066 -9.04895 -8.67792 -8.34185 -5.98642 -4.01422 1.32276 1.64449 1.67663 2.44932 3.32269 3.37372 3.40036 3.43946 3.44539 4.06220 4.33208 4.47163 4.58332 4.66490 4.87635 4.93633 5.14591 5.37200 5.67259 5.82959 5.84226 6.22524 6.25643 6.53058 6.65952 6.89242 7.04985 7.40292 7.68032 7.80871 7.81712 8.00682 8.39439 8.43678 9.05552 9.62604 11.12714 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.030564 B = 0.003201 C = 0.002907 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 915.902128 B = 8744.533135 C = 9629.381186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.088 3.912 2 N -0.282 5.282 3 C -0.005 4.005 4 C -0.103 4.103 5 Cl -0.008 7.008 6 C 0.004 3.996 7 C 0.592 3.408 8 O -0.520 6.520 9 N -0.711 5.711 10 C 0.117 3.883 11 C -0.121 4.121 12 C 0.023 3.977 13 C -0.521 4.521 14 H 0.056 0.944 15 C 0.056 3.944 16 N -0.894 5.894 17 Si 0.892 3.108 18 H -0.273 1.273 19 H -0.284 1.284 20 H -0.284 1.284 21 N -0.247 5.247 22 H 0.088 0.912 23 H 0.101 0.899 24 H 0.098 0.902 25 H 0.191 0.809 26 H 0.404 0.596 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.055 0.945 30 H 0.054 0.946 31 H 0.020 0.980 32 H 0.020 0.980 33 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.872 21.683 0.169 27.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.071 5.071 3 C -0.149 4.149 4 C -0.141 4.141 5 Cl 0.020 6.980 6 C -0.157 4.157 7 C 0.375 3.625 8 O -0.394 6.394 9 N -0.362 5.362 10 C -0.005 4.005 11 C -0.159 4.159 12 C -0.014 4.014 13 C -0.559 4.559 14 H 0.074 0.926 15 C -0.145 4.145 16 N -0.533 5.533 17 Si 0.720 3.280 18 H -0.198 1.198 19 H -0.210 1.210 20 H -0.210 1.210 21 N -0.083 5.083 22 H 0.107 0.893 23 H 0.119 0.881 24 H 0.117 0.883 25 H 0.208 0.792 26 H 0.238 0.762 27 H 0.085 0.915 28 H 0.085 0.915 29 H 0.073 0.927 30 H 0.073 0.927 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -16.590 21.051 0.172 26.803 hybrid contribution -0.211 -0.334 -0.016 0.395 sum -16.800 20.717 0.156 26.673 Atomic orbital electron populations 1.22258 0.72214 1.05846 1.04850 1.45363 1.07973 1.02694 1.51024 1.22610 0.89379 0.94199 1.08715 1.20860 0.89402 0.91207 1.12622 1.98369 1.35587 1.66909 1.97099 1.22079 0.91340 0.92652 1.09647 1.16804 0.86291 0.81837 0.77599 1.90839 1.21886 1.76977 1.49695 1.46057 1.11412 1.05127 1.73581 1.21710 0.87432 0.89155 1.02253 1.21894 1.01321 0.91697 1.00981 1.19042 0.91989 0.92685 0.97712 1.21250 0.92894 0.91099 1.50669 0.92586 1.25030 0.94887 0.99254 0.95341 1.69978 1.00877 1.31701 1.50737 0.86531 0.78934 0.84923 0.77568 1.19767 1.21023 1.21028 1.73644 1.02168 1.13834 1.18672 0.89310 0.88053 0.88342 0.79160 0.76190 0.91454 0.91459 0.92669 0.92675 0.96205 0.96203 0.93007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.28 11.32 59.85 0.68 0.96 16 2 N -0.28 -2.42 3.72 -67.94 -0.25 -2.67 16 3 C -0.01 -0.05 11.49 -16.86 -0.19 -0.24 16 4 C -0.10 -1.29 6.80 -39.31 -0.27 -1.56 16 5 Cl -0.01 -0.11 28.17 -51.86 -1.46 -1.57 16 6 C 0.00 0.06 7.13 -82.76 -0.59 -0.53 16 7 C 0.59 10.12 7.82 -12.41 -0.10 10.02 16 8 O -0.52 -10.35 15.87 5.30 0.08 -10.26 16 9 N -0.71 -11.55 5.55 -61.31 -0.34 -11.89 16 10 C 0.12 2.16 5.67 -4.04 -0.02 2.14 16 11 C -0.12 -2.45 5.27 -26.73 -0.14 -2.59 16 12 C 0.02 0.60 4.97 -27.88 -0.14 0.46 16 13 C -0.52 -14.73 9.11 -34.44 -0.31 -15.05 16 14 H 0.06 1.53 7.74 -52.49 -0.41 1.12 16 15 C 0.06 1.62 5.46 -17.82 -0.10 1.52 16 16 N -0.89 -27.08 13.29 55.43 0.74 -26.35 16 17 Si 0.89 21.69 29.54 -169.99 -5.02 16.67 16 18 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 19 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 20 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 21 N -0.25 -3.01 11.66 33.42 0.39 -2.62 16 22 H 0.09 0.18 8.14 -51.93 -0.42 -0.25 16 23 H 0.10 0.30 8.14 -51.93 -0.42 -0.12 16 24 H 0.10 0.04 8.13 -51.93 -0.42 -0.38 16 25 H 0.19 0.81 8.06 -52.49 -0.42 0.39 16 26 H 0.40 5.78 8.19 -40.82 -0.33 5.44 16 27 H 0.07 1.29 8.14 -51.93 -0.42 0.87 16 28 H 0.07 1.29 8.14 -51.93 -0.42 0.87 16 29 H 0.05 1.08 8.14 -51.93 -0.42 0.65 16 30 H 0.05 1.08 8.14 -51.93 -0.42 0.65 16 31 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 32 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 33 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 LS Contribution 309.74 15.07 4.67 4.67 Total: -1.00 -34.78 309.74 -6.48 -41.26 By element: Atomic # 1 Polarization: 1.73 SS G_CDS: -4.10 Total: -2.37 kcal Atomic # 6 Polarization: -3.68 SS G_CDS: -1.18 Total: -4.86 kcal Atomic # 7 Polarization: -44.07 SS G_CDS: 0.53 Total: -43.53 kcal Atomic # 8 Polarization: -10.35 SS G_CDS: 0.08 Total: -10.26 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -5.02 Total: 16.67 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -1.46 Total: -1.57 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -34.78 -6.48 -41.26 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000599341595.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.159 kcal (2) G-P(sol) polarization free energy of solvation -34.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.263 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds