Wall clock time and date at job start Mon Mar 30 2020 01:11:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47341 * 2 1 4 4 H 1.09000 * 109.47297 * 304.99874 * 3 2 1 5 5 C 1.50696 * 109.47129 * 184.99580 * 3 2 1 6 6 H 1.08000 * 120.00756 * 239.99717 * 5 3 2 7 7 C 1.37881 * 119.99791 * 60.00357 * 5 3 2 8 8 N 1.31517 * 120.00115 * 359.97438 * 7 5 3 9 9 Si 1.86804 * 119.99963 * 179.97438 * 7 5 3 10 10 H 1.48491 * 109.47252 * 59.99776 * 9 7 5 11 11 H 1.48504 * 109.47009 * 179.97438 * 9 7 5 12 12 H 1.48504 * 109.47040 * 299.99347 * 9 7 5 13 13 N 1.46497 * 109.47136 * 64.99887 * 3 2 1 14 14 C 1.34776 * 120.00077 * 274.99986 * 13 3 2 15 15 O 1.21693 * 120.00064 * 354.72815 * 14 13 3 16 16 C 1.46664 * 120.00022 * 174.72868 * 14 13 3 17 17 C 1.36676 * 126.84301 * 5.00270 * 16 14 13 18 18 N 1.33296 * 107.83075 * 179.83359 * 17 16 14 19 19 C 1.31029 * 109.70401 * 0.43881 * 18 17 16 20 20 Cl 1.73599 * 125.43282 * 179.69121 * 19 18 17 21 21 N 1.34599 * 109.12806 * 359.72523 * 19 18 17 22 22 C 1.46500 * 126.48763 * 179.97438 * 21 19 18 23 23 H 1.09000 * 109.46868 * 59.99911 * 1 2 3 24 24 H 1.08998 * 109.47015 * 300.00161 * 1 2 3 25 25 H 1.09004 * 109.47389 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.46868 * 120.00089 * 2 1 3 27 27 H 1.08998 * 109.47015 * 239.99838 * 2 1 3 28 28 H 0.96992 * 119.99948 * 180.02562 * 8 7 5 29 29 H 0.97005 * 120.00133 * 94.99627 * 13 3 2 30 30 H 1.08000 * 126.08321 * 359.97435 * 17 16 14 31 31 H 1.08998 * 109.46978 * 274.94492 * 22 21 19 32 32 H 1.08999 * 109.47024 * 34.94538 * 22 21 19 33 33 H 1.08997 * 109.46831 * 154.94605 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6055 1.9815 -0.8418 5 6 3.5419 1.4442 -0.1237 6 1 4.1473 1.8887 0.6523 7 6 4.1433 0.8783 -1.2279 8 7 3.4062 0.3365 -2.1728 9 14 6.0050 0.8810 -1.3817 10 1 6.5975 0.1471 -0.2348 11 1 6.3979 0.2164 -2.6502 12 1 6.4995 2.2813 -1.3821 13 7 1.6525 2.0974 1.2518 14 6 0.4352 2.6644 1.3669 15 8 -0.3051 2.7172 0.4025 16 6 0.0028 3.2177 2.6545 17 6 0.7491 3.3195 3.7949 18 7 -0.0135 3.8806 4.7331 19 6 -1.2039 4.1286 4.2449 20 17 -2.5200 4.8487 5.1183 21 7 -1.2436 3.7351 2.9583 22 6 -2.3900 3.8353 2.0516 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 1.8933 -0.5139 0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 3.8293 -0.0619 -2.9494 29 1 2.2719 2.1230 1.9978 30 1 1.7751 3.0038 3.9140 31 1 -3.0359 2.9675 2.1854 32 1 -2.9506 4.7433 2.2738 33 1 -2.0363 3.8695 1.0212 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000696474471.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:00 Heat of formation + Delta-G solvation = 13.441874 kcal Electronic energy + Delta-G solvation = -18755.137238 eV Core-core repulsion = 15649.896117 eV Total energy + Delta-G solvation = -3105.241121 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -42.22289 -38.84273 -37.14346 -35.29739 -34.15138 -32.53350 -31.26726 -29.50986 -27.19832 -26.95487 -23.62054 -22.60371 -21.50919 -20.07136 -19.48576 -18.07279 -16.77751 -16.23846 -15.71865 -15.47682 -14.80323 -14.44489 -14.37910 -13.88111 -13.28023 -13.23108 -12.79043 -12.74247 -12.33291 -11.90828 -11.76610 -11.58202 -11.32205 -11.04928 -10.87231 -10.43727 -10.33851 -10.26915 -9.87172 -9.74147 -9.33851 -9.12895 -8.58994 -8.54858 -7.96285 -6.17883 -4.27623 1.10670 1.31187 2.67546 2.69260 3.23907 3.29379 3.30615 3.72741 3.91957 4.32343 4.67640 4.71528 5.11449 5.14010 5.19852 5.37747 5.52088 5.97847 6.28820 6.33485 6.35517 6.53818 6.65432 6.93790 7.07727 7.22628 7.28555 7.51927 7.60377 7.65535 7.81002 8.08998 8.49249 8.67151 8.92229 9.39473 10.87499 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.035349 B = 0.004444 C = 0.004123 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 791.900896 B = 6298.769279 C = 6789.298562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.129 4.129 3 C 0.272 3.728 4 H 0.054 0.946 5 C -0.537 4.537 6 H 0.063 0.937 7 C 0.068 3.932 8 N -0.882 5.882 9 Si 0.902 3.098 10 H -0.275 1.275 11 H -0.286 1.286 12 H -0.276 1.276 13 N -0.688 5.688 14 C 0.580 3.420 15 O -0.550 6.550 16 C -0.049 4.049 17 C 0.035 3.965 18 N -0.470 5.470 19 C 0.247 3.753 20 Cl 0.032 6.968 21 N -0.413 5.413 22 C 0.059 3.941 23 H 0.050 0.950 24 H 0.033 0.967 25 H 0.026 0.974 26 H 0.034 0.966 27 H 0.102 0.898 28 H 0.266 0.734 29 H 0.392 0.608 30 H 0.189 0.811 31 H 0.083 0.917 32 H 0.085 0.915 33 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.313 5.374 10.028 14.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.167 4.167 3 C 0.171 3.829 4 H 0.071 0.929 5 C -0.575 4.575 6 H 0.081 0.919 7 C -0.135 4.135 8 N -0.519 5.519 9 Si 0.730 3.270 10 H -0.201 1.201 11 H -0.211 1.211 12 H -0.201 1.201 13 N -0.335 5.335 14 C 0.364 3.636 15 O -0.431 6.431 16 C -0.167 4.167 17 C -0.118 4.118 18 N -0.191 5.191 19 C -0.039 4.039 20 Cl 0.060 6.940 21 N -0.097 5.097 22 C -0.083 4.083 23 H 0.069 0.931 24 H 0.052 0.948 25 H 0.045 0.955 26 H 0.053 0.947 27 H 0.120 0.880 28 H 0.076 0.924 29 H 0.225 0.775 30 H 0.206 0.794 31 H 0.102 0.898 32 H 0.104 0.896 33 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -9.849 5.529 9.871 15.001 hybrid contribution 0.750 -0.095 -0.364 0.839 sum -9.099 5.434 9.507 14.237 Atomic orbital electron populations 1.21823 0.98560 0.98356 1.00814 1.21959 0.92453 0.99678 1.02658 1.18889 0.94527 0.89078 0.80382 0.92853 1.21166 0.90425 1.39401 1.06509 0.91900 1.24870 0.98719 0.94654 0.95280 1.69871 1.35336 1.37375 1.09357 0.86490 0.84646 0.78386 0.77499 1.20073 1.21141 1.20124 1.46266 1.13371 1.54741 1.19118 1.16658 0.83411 0.78775 0.84782 1.90748 1.54184 1.59310 1.38812 1.21384 0.86145 1.10166 0.99000 1.22678 1.00211 1.01325 0.87596 1.70001 0.99868 1.17722 1.31530 1.23109 0.92496 1.05660 0.82682 1.98406 1.41843 1.80561 1.73201 1.45032 1.11697 1.43427 1.09541 1.22454 0.86385 1.03332 0.96086 0.93085 0.94768 0.95521 0.94721 0.87965 0.92422 0.77457 0.79361 0.89838 0.89635 0.86257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.91 8.58 37.16 0.32 -2.59 16 2 C -0.13 -2.97 5.45 -26.73 -0.15 -3.11 16 3 C 0.27 6.48 2.25 -69.09 -0.16 6.32 16 4 H 0.05 1.47 7.51 -51.93 -0.39 1.08 16 5 C -0.54 -13.52 8.73 -34.44 -0.30 -13.83 16 6 H 0.06 1.51 7.74 -52.49 -0.41 1.10 16 7 C 0.07 1.76 5.29 -17.82 -0.09 1.67 16 8 N -0.88 -23.81 11.29 55.43 0.63 -23.18 16 9 Si 0.90 19.99 29.54 -169.99 -5.02 14.97 16 10 H -0.28 -6.00 7.11 56.52 0.40 -5.60 16 11 H -0.29 -6.35 7.11 56.52 0.40 -5.94 16 12 H -0.28 -6.09 7.11 56.52 0.40 -5.69 16 13 N -0.69 -13.49 5.01 -56.25 -0.28 -13.77 16 14 C 0.58 11.04 6.15 -12.86 -0.08 10.96 16 15 O -0.55 -11.76 12.34 5.19 0.06 -11.70 16 16 C -0.05 -0.80 6.91 -82.10 -0.57 -1.37 16 17 C 0.04 0.53 11.37 -17.48 -0.20 0.33 16 18 N -0.47 -7.27 11.21 -11.49 -0.13 -7.40 16 19 C 0.25 3.50 8.48 -90.34 -0.77 2.73 16 20 Cl 0.03 0.35 28.85 -51.86 -1.50 -1.14 16 21 N -0.41 -6.01 3.18 -118.36 -0.38 -6.38 16 22 C 0.06 0.69 10.64 59.85 0.64 1.32 16 23 H 0.05 1.13 7.92 -51.93 -0.41 0.72 16 24 H 0.03 0.70 5.76 -51.93 -0.30 0.40 16 25 H 0.03 0.50 8.14 -51.93 -0.42 0.08 16 26 H 0.03 0.77 8.14 -51.93 -0.42 0.34 16 27 H 0.10 2.62 5.95 -51.93 -0.31 2.31 16 28 H 0.27 6.86 8.31 -40.82 -0.34 6.52 16 29 H 0.39 6.64 7.48 -40.82 -0.31 6.34 16 30 H 0.19 2.26 7.46 -52.49 -0.39 1.87 16 31 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 32 H 0.09 0.76 7.94 -51.93 -0.41 0.35 16 33 H 0.12 1.62 6.15 -51.93 -0.32 1.30 16 LS Contribution 293.21 15.07 4.42 4.42 Total: -1.00 -28.93 293.21 -7.19 -36.12 By element: Atomic # 1 Polarization: 9.27 SS G_CDS: -3.65 Total: 5.62 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: -1.35 Total: 2.44 kcal Atomic # 7 Polarization: -50.57 SS G_CDS: -0.16 Total: -50.73 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: 0.06 Total: -11.70 kcal Atomic # 14 Polarization: 19.99 SS G_CDS: -5.02 Total: 14.97 kcal Atomic # 17 Polarization: 0.35 SS G_CDS: -1.50 Total: -1.14 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -28.93 -7.19 -36.12 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000696474471.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.561 kcal (2) G-P(sol) polarization free energy of solvation -28.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.635 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.119 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds