Wall clock time and date at job start Mon Mar 30 2020 01:26:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46500 * 109.47053 * 2 1 4 4 C 1.46503 * 120.00043 * 96.36763 * 3 2 1 5 5 C 1.50699 * 109.46929 * 89.99942 * 4 3 2 6 6 H 1.07995 * 120.00137 * 359.97438 * 5 4 3 7 7 C 1.37875 * 119.99617 * 180.02562 * 5 4 3 8 8 N 1.31514 * 120.00451 * 359.97438 * 7 5 4 9 9 Si 1.86809 * 119.99842 * 179.97438 * 7 5 4 10 10 H 1.48502 * 109.46830 * 59.99618 * 9 7 5 11 11 H 1.48496 * 109.46847 * 179.97438 * 9 7 5 12 12 H 1.48497 * 109.47005 * 299.99752 * 9 7 5 13 13 C 1.34781 * 119.99959 * 276.36515 * 3 2 1 14 14 O 1.21691 * 119.99912 * 183.20984 * 13 3 2 15 15 C 1.46657 * 119.99898 * 3.21599 * 13 3 2 16 16 C 1.36681 * 126.84565 * 7.79120 * 15 13 3 17 17 N 1.33294 * 107.83365 * 179.97438 * 16 15 13 18 18 C 1.31025 * 109.70421 * 0.02562 * 17 16 15 19 19 Cl 1.73603 * 125.43745 * 179.97438 * 18 17 16 20 20 N 1.34597 * 109.12856 * 359.75769 * 18 17 16 21 21 C 1.46506 * 126.49427 * 180.26282 * 20 18 17 22 22 H 1.08995 * 109.47448 * 171.84043 * 1 2 3 23 23 H 1.09003 * 109.47143 * 291.83935 * 1 2 3 24 24 H 1.09007 * 109.47294 * 51.83814 * 1 2 3 25 25 H 1.08996 * 109.47042 * 120.00067 * 2 1 3 26 26 H 1.08996 * 109.46996 * 240.00042 * 2 1 3 27 27 H 1.09000 * 109.46794 * 209.99829 * 4 3 2 28 28 H 1.08999 * 109.46570 * 329.99687 * 4 3 2 29 29 H 0.96998 * 120.00209 * 180.02562 * 8 7 5 30 30 H 1.08001 * 126.07973 * 359.96826 * 16 15 13 31 31 H 1.09002 * 109.47070 * 274.17331 * 21 20 18 32 32 H 1.09004 * 109.46537 * 34.17019 * 21 20 18 33 33 H 1.08998 * 109.47547 * 154.17259 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.3951 2.0250 1.2609 5 6 3.8556 1.7750 1.5356 6 1 4.4442 1.1943 0.8408 7 6 4.4402 2.2867 2.6747 8 7 3.7234 2.9934 3.5211 9 14 6.2505 1.9763 3.0156 10 1 7.0661 2.5392 1.9097 11 1 6.6324 2.6289 4.2937 12 1 6.4920 0.5144 3.1143 13 6 2.1209 2.0597 -1.1600 14 8 2.5813 3.1862 -1.1674 15 6 1.6777 1.4405 -2.4134 16 6 1.0097 0.2560 -2.5510 17 7 0.7951 0.0570 -3.8514 18 6 1.2939 1.0545 -4.5392 19 17 1.2430 1.2105 -6.2674 20 7 1.8479 1.9412 -3.6916 21 6 2.5082 3.1978 -4.0541 22 1 -0.3634 -1.0172 -0.1458 23 1 -0.3633 0.3823 0.9539 24 1 -0.3634 0.6350 -0.8081 25 1 1.8933 -0.5138 0.8899 26 1 1.8933 -0.5138 -0.8900 27 1 2.2175 3.0979 1.1883 28 1 1.7967 1.6117 2.0728 29 1 4.1348 3.3537 4.3222 30 1 0.7093 -0.4017 -1.7487 31 1 3.5551 3.0038 -4.2878 32 1 2.0152 3.6289 -4.9254 33 1 2.4456 3.8953 -3.2189 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000696474490.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:32 Heat of formation + Delta-G solvation = 47.926218 kcal Electronic energy + Delta-G solvation = -18954.640057 eV Core-core repulsion = 15850.894289 eV Total energy + Delta-G solvation = -3103.745768 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.28494 -38.86382 -37.09844 -35.94419 -33.94506 -32.99447 -30.79330 -29.61451 -27.08457 -27.05569 -23.69040 -23.12514 -21.95941 -21.13392 -18.98097 -17.23413 -16.66260 -16.37617 -16.10459 -15.66010 -14.75811 -14.59685 -14.24901 -14.12136 -13.34020 -13.18712 -12.84524 -12.46120 -12.11935 -12.05515 -11.94176 -11.80627 -11.62764 -11.27728 -11.00658 -10.81826 -10.56439 -10.33200 -10.16354 -9.80269 -9.73646 -9.23253 -8.48602 -8.45263 -7.82380 -6.09999 -4.15081 1.15030 1.36196 2.70954 2.74091 3.29220 3.33663 3.36421 3.70528 3.81112 4.40044 4.66547 4.73391 4.96386 5.17300 5.20799 5.24961 5.35849 5.49687 5.56865 5.68015 5.92476 6.02711 6.14826 6.39069 6.46788 6.69642 6.95651 7.31439 7.40215 7.66865 7.85491 8.14493 8.21272 8.74823 8.92089 9.50060 10.98050 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.027853 B = 0.005023 C = 0.004604 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1005.024144 B = 5573.370649 C = 6080.277674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.085 3.915 3 N -0.575 5.575 4 C 0.249 3.751 5 C -0.529 4.529 6 H 0.058 0.942 7 C 0.063 3.937 8 N -0.894 5.894 9 Si 0.899 3.101 10 H -0.277 1.277 11 H -0.286 1.286 12 H -0.276 1.276 13 C 0.579 3.421 14 O -0.541 6.541 15 C -0.048 4.048 16 C 0.006 3.994 17 N -0.472 5.472 18 C 0.246 3.754 19 Cl 0.031 6.969 20 N -0.414 5.414 21 C 0.058 3.942 22 H 0.069 0.931 23 H 0.067 0.933 24 H 0.063 0.937 25 H 0.092 0.908 26 H 0.080 0.920 27 H 0.045 0.955 28 H 0.038 0.962 29 H 0.265 0.735 30 H 0.217 0.783 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.067 -4.489 -13.898 15.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.245 4.245 2 C -0.039 4.039 3 N -0.305 5.305 4 C 0.131 3.869 5 C -0.568 4.568 6 H 0.076 0.924 7 C -0.139 4.139 8 N -0.533 5.533 9 Si 0.726 3.274 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.202 1.202 13 C 0.365 3.635 14 O -0.420 6.420 15 C -0.166 4.166 16 C -0.146 4.146 17 N -0.194 5.194 18 C -0.040 4.040 19 Cl 0.058 6.942 20 N -0.098 5.098 21 C -0.083 4.083 22 H 0.088 0.912 23 H 0.086 0.914 24 H 0.082 0.918 25 H 0.110 0.890 26 H 0.098 0.902 27 H 0.063 0.937 28 H 0.056 0.944 29 H 0.074 0.926 30 H 0.233 0.767 31 H 0.102 0.898 32 H 0.104 0.896 33 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -6.118 -4.260 -14.231 16.065 hybrid contribution 1.453 0.575 0.266 1.585 sum -4.665 -3.685 -13.965 15.178 Atomic orbital electron populations 1.22507 0.96420 1.02195 1.03356 1.22024 0.93658 0.84243 1.03965 1.47986 1.61926 1.12894 1.07699 1.19391 0.95580 0.94393 0.77566 1.21368 0.94869 1.34013 1.06526 0.92392 1.24914 0.98312 0.94824 0.95863 1.69913 1.36315 1.34958 1.12094 0.86549 0.84893 0.78413 0.77518 1.20228 1.21138 1.20164 1.16623 0.79545 0.85462 0.81847 1.90754 1.46275 1.18938 1.86050 1.21321 1.10637 0.98890 0.85750 1.24219 1.00608 0.96244 0.93566 1.70091 1.22076 1.22801 1.04385 1.23164 1.03568 0.90528 0.86781 1.98402 1.97414 1.97161 1.01210 1.45035 1.41419 1.18145 1.05159 1.22455 0.97965 0.83596 1.04280 0.91200 0.91423 0.91792 0.88983 0.90173 0.93670 0.94359 0.92572 0.76689 0.89789 0.89593 0.86328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.36 8.43 37.16 0.31 -2.05 16 2 C 0.08 1.32 5.63 -4.04 -0.02 1.29 16 3 N -0.57 -11.80 2.47 -176.61 -0.44 -12.24 16 4 C 0.25 6.24 5.11 -5.19 -0.03 6.21 16 5 C -0.53 -14.53 9.39 -34.44 -0.32 -14.86 16 6 H 0.06 1.60 7.81 -52.49 -0.41 1.19 16 7 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 8 N -0.89 -25.83 13.29 55.43 0.74 -25.09 16 9 Si 0.90 21.40 29.54 -169.99 -5.02 16.38 16 10 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 11 H -0.29 -6.70 7.11 56.52 0.40 -6.30 16 12 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 13 C 0.58 12.08 7.56 -12.86 -0.10 11.98 16 14 O -0.54 -12.97 14.40 5.20 0.07 -12.90 16 15 C -0.05 -0.84 6.65 -82.10 -0.55 -1.39 16 16 C 0.01 0.09 8.31 -17.48 -0.15 -0.06 16 17 N -0.47 -7.47 11.21 -11.48 -0.13 -7.60 16 18 C 0.25 3.62 8.48 -90.34 -0.77 2.86 16 19 Cl 0.03 0.35 28.83 -51.86 -1.50 -1.15 16 20 N -0.41 -6.43 3.18 -118.35 -0.38 -6.81 16 21 C 0.06 0.75 10.65 59.85 0.64 1.38 16 22 H 0.07 0.68 8.07 -51.93 -0.42 0.26 16 23 H 0.07 0.90 8.14 -51.93 -0.42 0.47 16 24 H 0.06 0.85 6.18 -51.92 -0.32 0.53 16 25 H 0.09 1.43 8.02 -51.93 -0.42 1.01 16 26 H 0.08 1.13 5.13 -51.93 -0.27 0.86 16 27 H 0.05 1.27 7.47 -51.93 -0.39 0.88 16 28 H 0.04 0.96 8.07 -51.93 -0.42 0.54 16 29 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 30 H 0.22 2.84 3.06 -52.49 -0.16 2.68 16 31 H 0.08 0.97 8.14 -51.93 -0.42 0.55 16 32 H 0.09 0.83 7.92 -51.93 -0.41 0.42 16 33 H 0.12 1.76 6.17 -51.93 -0.32 1.44 16 LS Contribution 292.40 15.07 4.41 4.41 Total: -1.00 -31.92 292.40 -6.83 -38.74 By element: Atomic # 1 Polarization: 2.73 SS G_CDS: -3.51 Total: -0.78 kcal Atomic # 6 Polarization: 8.11 SS G_CDS: -1.07 Total: 7.04 kcal Atomic # 7 Polarization: -51.54 SS G_CDS: -0.21 Total: -51.74 kcal Atomic # 8 Polarization: -12.97 SS G_CDS: 0.07 Total: -12.90 kcal Atomic # 14 Polarization: 21.40 SS G_CDS: -5.02 Total: 16.38 kcal Atomic # 17 Polarization: 0.35 SS G_CDS: -1.50 Total: -1.15 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -31.92 -6.83 -38.74 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000696474490.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.669 kcal (2) G-P(sol) polarization free energy of solvation -31.917 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.743 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds