Wall clock time and date at job start Mon Mar 30 2020 01:20:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 H 1.09000 * 109.46257 * 2 1 4 4 C 1.50698 * 109.46726 * 240.00654 * 2 1 3 5 5 H 1.08008 * 119.99418 * 239.99042 * 4 2 1 6 6 C 1.37873 * 120.00643 * 59.99904 * 4 2 1 7 7 N 1.31511 * 119.99636 * 359.97438 * 6 4 2 8 8 Si 1.86800 * 120.00054 * 179.97438 * 6 4 2 9 9 H 1.48496 * 109.47173 * 90.00221 * 8 6 4 10 10 H 1.48504 * 109.46846 * 209.99679 * 8 6 4 11 11 H 1.48495 * 109.47098 * 329.99511 * 8 6 4 12 12 N 1.46493 * 109.47156 * 120.00451 * 2 1 3 13 13 C 1.46498 * 120.00234 * 59.99951 * 12 2 1 14 14 C 1.34783 * 119.99446 * 240.00202 * 12 2 1 15 15 O 1.21684 * 120.00431 * 5.61539 * 14 12 2 16 16 C 1.46663 * 119.99771 * 185.61593 * 14 12 2 17 17 C 1.36676 * 126.83886 * 6.99124 * 16 14 12 18 18 N 1.33310 * 107.82705 * 179.97438 * 17 16 14 19 19 C 1.31016 * 109.70371 * 0.02562 * 18 17 16 20 20 Cl 1.73602 * 125.43245 * 180.02562 * 19 18 17 21 21 N 1.34603 * 109.13019 * 359.74758 * 19 18 17 22 22 C 1.46502 * 126.48757 * 180.27882 * 21 19 18 23 23 H 1.08993 * 109.47338 * 299.99414 * 1 2 3 24 24 H 1.08998 * 109.47444 * 60.00042 * 1 2 3 25 25 H 1.09005 * 109.46668 * 179.97438 * 1 2 3 26 26 H 0.97004 * 120.00138 * 179.97438 * 7 6 4 27 27 H 1.08998 * 109.46609 * 95.73183 * 13 12 2 28 28 H 1.09003 * 109.46915 * 215.72627 * 13 12 2 29 29 H 1.08999 * 109.47310 * 335.72755 * 13 12 2 30 30 H 1.08000 * 126.09237 * 359.97438 * 17 16 14 31 31 H 1.09005 * 109.46608 * 264.47378 * 22 21 19 32 32 H 1.08991 * 109.47495 * 24.47853 * 22 21 19 33 33 H 1.09004 * 109.46921 * 144.48043 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 6 2.0323 -0.7103 -1.2306 5 1 2.6534 -1.5884 -1.1315 6 6 1.6992 -0.2392 -2.4828 7 7 0.9428 0.8298 -2.6033 8 14 2.3225 -1.1193 -4.0080 9 1 1.3448 -2.1613 -4.4125 10 1 2.4871 -0.1399 -5.1121 11 1 3.6308 -1.7563 -3.7121 12 7 2.0184 -0.6907 1.1961 13 6 1.6645 -2.0932 1.4278 14 6 2.7932 -0.0356 2.0833 15 8 3.0032 1.1550 1.9452 16 6 3.3833 -0.7578 3.2151 17 6 3.3520 -2.1068 3.4325 18 7 4.0029 -2.3522 4.5697 19 6 4.4415 -1.2276 5.0791 20 17 5.3430 -1.0752 6.5549 21 7 4.0869 -0.2101 4.2726 22 6 4.3872 1.2092 4.4772 23 1 -0.3633 0.5137 0.8900 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 0.7087 1.1615 -3.4843 27 1 2.4655 -2.7353 1.0614 28 1 1.5243 -2.2609 2.4957 29 1 0.7406 -2.3271 0.8989 30 1 2.8834 -2.8431 2.7963 31 1 3.5413 1.6927 4.9659 32 1 5.2733 1.3063 5.1043 33 1 4.5703 1.6844 3.5135 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000696476219.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:20:56 Heat of formation + Delta-G solvation = 43.124151 kcal Electronic energy + Delta-G solvation = -18907.993753 eV Core-core repulsion = 15804.039752 eV Total energy + Delta-G solvation = -3103.954001 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.24696 -38.86564 -37.12028 -35.69752 -34.10979 -33.02409 -30.57115 -28.53468 -27.34973 -26.44839 -25.27874 -23.17340 -21.67332 -20.48517 -18.97023 -17.16558 -16.74089 -16.19528 -16.14478 -15.51980 -14.76282 -14.40000 -14.19574 -14.07664 -13.25631 -13.11398 -12.84291 -12.60987 -12.51119 -11.94709 -11.75335 -11.62267 -11.18411 -11.07585 -10.83713 -10.76748 -10.38101 -10.30315 -10.20156 -9.82654 -9.33910 -9.20549 -8.50477 -8.48907 -7.74952 -6.13481 -4.22031 1.13042 1.34397 2.69345 2.72976 3.23941 3.31355 3.34212 3.69587 3.79949 4.35041 4.64219 4.75309 5.00830 5.16200 5.18577 5.32908 5.52393 5.60152 5.91414 5.96585 6.19394 6.39889 6.66069 6.70950 6.75927 6.96407 7.28923 7.39767 7.63785 7.65940 7.93173 8.08691 8.35361 8.68895 8.87048 9.44803 10.91841 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.034935 B = 0.004578 C = 0.004454 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 801.297522 B = 6114.959479 C = 6285.607623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.261 3.739 3 H 0.066 0.934 4 C -0.528 4.528 5 H 0.061 0.939 6 C 0.066 3.934 7 N -0.887 5.887 8 Si 0.900 3.100 9 H -0.279 1.279 10 H -0.285 1.285 11 H -0.274 1.274 12 N -0.571 5.571 13 C 0.065 3.935 14 C 0.579 3.421 15 O -0.554 6.554 16 C -0.047 4.047 17 C 0.018 3.982 18 N -0.471 5.471 19 C 0.247 3.753 20 Cl 0.031 6.969 21 N -0.415 5.415 22 C 0.064 3.936 23 H 0.013 0.987 24 H 0.096 0.904 25 H 0.032 0.968 26 H 0.264 0.736 27 H 0.058 0.942 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.208 0.792 31 H 0.084 0.916 32 H 0.086 0.914 33 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.292 -3.307 13.867 14.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.161 3.839 3 H 0.083 0.917 4 C -0.567 4.567 5 H 0.080 0.920 6 C -0.137 4.137 7 N -0.525 5.525 8 Si 0.728 3.272 9 H -0.205 1.205 10 H -0.211 1.211 11 H -0.199 1.199 12 N -0.301 5.301 13 C -0.078 4.078 14 C 0.365 3.635 15 O -0.435 6.435 16 C -0.165 4.165 17 C -0.135 4.135 18 N -0.193 5.193 19 C -0.039 4.039 20 Cl 0.059 6.941 21 N -0.099 5.099 22 C -0.077 4.077 23 H 0.032 0.968 24 H 0.114 0.886 25 H 0.051 0.949 26 H 0.074 0.926 27 H 0.076 0.924 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.224 0.776 31 H 0.103 0.897 32 H 0.105 0.895 33 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 4.535 -3.112 14.125 15.158 hybrid contribution 0.365 0.296 -0.965 1.073 sum 4.900 -2.816 13.160 14.323 Atomic orbital electron populations 1.22112 0.97836 0.99625 1.01057 1.19061 0.91140 0.94488 0.79194 0.91666 1.21306 1.32127 1.13188 0.90081 0.92050 1.24882 0.94861 0.94932 0.98999 1.69874 1.36208 1.22520 1.23908 0.86463 0.79255 0.79289 0.82222 1.20517 1.21106 1.19875 1.47977 1.47384 1.11903 1.22823 1.22231 1.01983 0.83039 1.00570 1.16674 0.79724 0.86142 0.80993 1.90744 1.62261 1.14589 1.75893 1.21283 1.06600 0.94458 0.94114 1.23776 1.00908 0.93782 0.95001 1.70078 1.14675 1.23945 1.10628 1.23146 1.04000 0.84810 0.91948 1.98403 1.71138 1.97427 1.27161 1.45024 1.39235 1.08655 1.17000 1.22361 1.02482 0.76922 1.05958 0.96809 0.88593 0.94860 0.92592 0.92359 0.91378 0.89929 0.77572 0.89723 0.89489 0.87008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.39 8.96 37.16 0.33 -3.06 16 2 C 0.26 6.40 2.62 -69.08 -0.18 6.21 16 3 H 0.07 1.85 6.91 -51.93 -0.36 1.49 16 4 C -0.53 -13.76 8.37 -34.44 -0.29 -14.05 16 5 H 0.06 1.57 7.65 -52.48 -0.40 1.17 16 6 C 0.07 1.74 5.30 -17.82 -0.09 1.65 16 7 N -0.89 -24.35 11.32 55.43 0.63 -23.73 16 8 Si 0.90 20.52 29.54 -169.99 -5.02 15.50 16 9 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 10 H -0.29 -6.53 7.11 56.52 0.40 -6.13 16 11 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 12 N -0.57 -11.80 2.75 -176.82 -0.49 -12.28 16 13 C 0.07 1.04 7.87 59.85 0.47 1.51 16 14 C 0.58 11.91 7.63 -12.86 -0.10 11.81 16 15 O -0.55 -12.90 14.34 5.20 0.07 -12.82 16 16 C -0.05 -0.81 6.75 -82.10 -0.55 -1.37 16 17 C 0.02 0.28 9.79 -17.47 -0.17 0.11 16 18 N -0.47 -7.50 11.21 -11.48 -0.13 -7.62 16 19 C 0.25 3.61 8.48 -90.34 -0.77 2.85 16 20 Cl 0.03 0.35 28.63 -51.86 -1.48 -1.14 16 21 N -0.42 -6.33 3.18 -118.36 -0.38 -6.71 16 22 C 0.06 0.79 10.49 59.85 0.63 1.42 16 23 H 0.01 0.28 8.14 -51.93 -0.42 -0.14 16 24 H 0.10 2.43 6.07 -51.93 -0.32 2.11 16 25 H 0.03 0.70 6.67 -51.93 -0.35 0.35 16 26 H 0.26 6.91 8.31 -40.82 -0.34 6.57 16 27 H 0.06 0.86 7.41 -51.93 -0.38 0.48 16 28 H 0.07 0.91 5.28 -51.93 -0.27 0.64 16 29 H 0.08 1.31 6.44 -51.93 -0.33 0.98 16 30 H 0.21 2.71 4.40 -52.49 -0.23 2.48 16 31 H 0.08 0.94 8.14 -51.93 -0.42 0.51 16 32 H 0.09 0.80 7.62 -51.93 -0.40 0.41 16 33 H 0.11 1.58 6.69 -51.93 -0.35 1.23 16 LS Contribution 288.29 15.07 4.34 4.34 Total: -1.00 -30.36 288.29 -6.54 -36.90 By element: Atomic # 1 Polarization: 3.86 SS G_CDS: -3.37 Total: 0.49 kcal Atomic # 6 Polarization: 7.79 SS G_CDS: -0.72 Total: 7.07 kcal Atomic # 7 Polarization: -49.98 SS G_CDS: -0.36 Total: -50.34 kcal Atomic # 8 Polarization: -12.90 SS G_CDS: 0.07 Total: -12.82 kcal Atomic # 14 Polarization: 20.52 SS G_CDS: -5.02 Total: 15.50 kcal Atomic # 17 Polarization: 0.35 SS G_CDS: -1.48 Total: -1.14 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -30.36 -6.54 -36.90 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000696476219.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.026 kcal (2) G-P(sol) polarization free energy of solvation -30.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.902 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds