Wall clock time and date at job start Mon Mar 30 2020 01:20:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.08997 * 109.46757 * 2 1 4 4 C 1.50701 * 109.46841 * 120.00122 * 2 1 3 5 5 H 1.07997 * 120.00081 * 120.00324 * 4 2 1 6 6 C 1.37874 * 119.99959 * 299.99789 * 4 2 1 7 7 N 1.31513 * 120.00392 * 0.02562 * 6 4 2 8 8 Si 1.86806 * 120.00072 * 180.02562 * 6 4 2 9 9 H 1.48498 * 109.47612 * 89.99763 * 8 6 4 10 10 H 1.48504 * 109.47092 * 210.00345 * 8 6 4 11 11 H 1.48507 * 109.46718 * 329.99393 * 8 6 4 12 12 N 1.46497 * 109.46874 * 239.99668 * 2 1 3 13 13 C 1.46497 * 120.00634 * 299.99929 * 12 2 1 14 14 C 1.34786 * 119.99388 * 120.00278 * 12 2 1 15 15 O 1.21694 * 120.00170 * 354.78196 * 14 12 2 16 16 C 1.46663 * 119.99556 * 175.06211 * 14 12 2 17 17 C 1.36676 * 126.84041 * 352.74619 * 16 14 12 18 18 N 1.33308 * 107.82267 * 179.83561 * 17 16 14 19 19 C 1.31020 * 109.70779 * 0.44229 * 18 17 16 20 20 Cl 1.73598 * 125.43260 * 179.68969 * 19 18 17 21 21 N 1.34597 * 109.12703 * 359.71955 * 19 18 17 22 22 C 1.46503 * 126.48648 * 179.97438 * 21 19 18 23 23 H 1.09000 * 109.47403 * 180.02562 * 1 2 3 24 24 H 1.09006 * 109.47304 * 299.99932 * 1 2 3 25 25 H 1.08996 * 109.47433 * 59.99788 * 1 2 3 26 26 H 0.97003 * 120.00461 * 179.97438 * 7 6 4 27 27 H 1.08996 * 109.47529 * 265.53816 * 13 12 2 28 28 H 1.09007 * 109.46548 * 25.53217 * 13 12 2 29 29 H 1.08997 * 109.46985 * 145.53134 * 13 12 2 30 30 H 1.07995 * 126.08690 * 359.97438 * 17 16 14 31 31 H 1.09002 * 109.47536 * 264.86921 * 22 21 19 32 32 H 1.08992 * 109.47286 * 24.87212 * 22 21 19 33 33 H 1.09003 * 109.46846 * 144.87079 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7105 1.2305 5 1 2.6532 -1.5885 1.1314 6 6 1.6992 -0.2394 2.4827 7 7 0.9428 0.8296 2.6034 8 14 2.3224 -1.1196 4.0080 9 1 3.6304 -0.5442 4.4120 10 1 1.3442 -0.9491 5.1123 11 1 2.4877 -2.5655 3.7122 12 7 2.0183 -0.6907 -1.1961 13 6 1.6645 -2.0932 -1.4280 14 6 2.7932 -0.0356 -2.0833 15 8 3.0092 1.1535 -1.9411 16 6 3.3711 -0.7547 -3.2235 17 6 3.3322 -2.1024 -3.4473 18 7 3.9693 -2.3443 -4.5930 19 6 4.4151 -1.2199 -5.0966 20 17 5.3098 -1.0645 -6.5761 21 7 4.0692 -0.2047 -4.2834 22 6 4.3749 1.2142 -4.4828 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 0.7081 1.1608 3.4845 27 1 2.4551 -2.7362 -1.0413 28 1 0.7287 -2.3210 -0.9173 29 1 1.5461 -2.2660 -2.4976 30 1 2.8661 -2.8398 -2.8107 31 1 5.2828 1.4705 -3.9367 32 1 4.5229 1.4082 -5.5450 33 1 3.5464 1.8195 -4.1148 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000696476225.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:20:58 Heat of formation + Delta-G solvation = 44.118737 kcal Electronic energy + Delta-G solvation = -18907.473505 eV Core-core repulsion = 15803.562632 eV Total energy + Delta-G solvation = -3103.910873 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.25208 -38.86276 -37.12193 -35.69440 -34.11522 -33.02456 -30.57658 -28.53368 -27.35541 -26.45125 -25.27898 -23.17385 -21.68096 -20.48218 -18.96890 -17.16447 -16.73923 -16.22561 -16.14083 -15.51260 -14.76852 -14.39120 -14.19039 -14.08923 -13.24526 -13.12047 -12.83949 -12.60937 -12.49832 -11.94926 -11.76362 -11.62506 -11.15884 -11.07056 -10.85478 -10.78508 -10.38042 -10.27855 -10.20141 -9.82533 -9.33729 -9.21831 -8.50133 -8.48780 -7.74654 -6.13351 -4.21891 1.12800 1.34506 2.68718 2.72903 3.24740 3.31596 3.33421 3.69618 3.79732 4.35130 4.62987 4.75298 5.00565 5.17435 5.18764 5.32503 5.50819 5.59675 5.90696 5.96941 6.19796 6.39538 6.65847 6.70823 6.75826 6.96415 7.28909 7.39865 7.63847 7.65720 7.93183 8.08777 8.35502 8.69097 8.87180 9.44933 10.91965 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.035089 B = 0.004572 C = 0.004449 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 797.774568 B = 6122.251212 C = 6291.990422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.260 3.740 3 H 0.065 0.935 4 C -0.528 4.528 5 H 0.061 0.939 6 C 0.066 3.934 7 N -0.887 5.887 8 Si 0.900 3.100 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.273 1.273 12 N -0.571 5.571 13 C 0.063 3.937 14 C 0.578 3.422 15 O -0.554 6.554 16 C -0.047 4.047 17 C 0.017 3.983 18 N -0.471 5.471 19 C 0.247 3.753 20 Cl 0.031 6.969 21 N -0.415 5.415 22 C 0.068 3.932 23 H 0.032 0.968 24 H 0.096 0.904 25 H 0.013 0.987 26 H 0.264 0.736 27 H 0.058 0.942 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.209 0.791 31 H 0.087 0.913 32 H 0.086 0.914 33 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.160 -3.292 -13.986 14.958 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.161 3.839 3 H 0.083 0.917 4 C -0.567 4.567 5 H 0.079 0.921 6 C -0.137 4.137 7 N -0.525 5.525 8 Si 0.728 3.272 9 H -0.206 1.206 10 H -0.211 1.211 11 H -0.198 1.198 12 N -0.301 5.301 13 C -0.080 4.080 14 C 0.364 3.636 15 O -0.435 6.435 16 C -0.164 4.164 17 C -0.135 4.135 18 N -0.193 5.193 19 C -0.039 4.039 20 Cl 0.059 6.941 21 N -0.099 5.099 22 C -0.074 4.074 23 H 0.052 0.948 24 H 0.114 0.886 25 H 0.032 0.968 26 H 0.074 0.926 27 H 0.077 0.923 28 H 0.100 0.900 29 H 0.088 0.912 30 H 0.225 0.775 31 H 0.105 0.895 32 H 0.105 0.895 33 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 4.385 -3.100 -14.251 15.229 hybrid contribution 0.420 0.306 1.002 1.128 sum 4.805 -2.795 -13.249 14.368 Atomic orbital electron populations 1.22109 0.97827 0.99631 1.01053 1.19060 0.91138 0.94485 0.79205 0.91671 1.21304 1.32103 1.13200 0.90085 0.92052 1.24882 0.94832 0.94957 0.98995 1.69873 1.36152 1.22598 1.23902 0.86468 0.78633 0.79934 0.82206 1.20611 1.21092 1.19794 1.47978 1.47354 1.11905 1.22836 1.22265 1.02065 0.83056 1.00603 1.16682 0.79723 0.86144 0.81055 1.90759 1.62136 1.14667 1.75904 1.21289 1.06679 0.94462 0.93992 1.23794 1.01106 0.93851 0.94799 1.70078 1.14680 1.23894 1.10660 1.23139 1.04037 0.84861 0.91876 1.98403 1.71471 1.97378 1.26867 1.45024 1.39363 1.08705 1.16834 1.22314 1.04888 0.77114 1.03080 0.94848 0.88592 0.96813 0.92592 0.92341 0.89999 0.91195 0.77495 0.89496 0.89541 0.87466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.39 8.96 37.16 0.33 -3.06 16 2 C 0.26 6.40 2.63 -69.08 -0.18 6.22 16 3 H 0.07 1.85 6.91 -51.93 -0.36 1.49 16 4 C -0.53 -13.78 8.37 -34.44 -0.29 -14.07 16 5 H 0.06 1.58 7.65 -52.49 -0.40 1.17 16 6 C 0.07 1.75 5.30 -17.82 -0.09 1.65 16 7 N -0.89 -24.38 11.32 55.43 0.63 -23.75 16 8 Si 0.90 20.54 29.54 -169.99 -5.02 15.52 16 9 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 10 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 11 H -0.27 -6.10 7.11 56.52 0.40 -5.70 16 12 N -0.57 -11.80 2.75 -176.81 -0.49 -12.28 16 13 C 0.06 1.01 7.91 59.85 0.47 1.48 16 14 C 0.58 11.89 7.64 -12.86 -0.10 11.80 16 15 O -0.55 -12.91 14.46 5.19 0.08 -12.84 16 16 C -0.05 -0.81 6.75 -82.10 -0.55 -1.36 16 17 C 0.02 0.26 9.79 -17.48 -0.17 0.09 16 18 N -0.47 -7.48 11.21 -11.49 -0.13 -7.61 16 19 C 0.25 3.60 8.48 -90.34 -0.77 2.84 16 20 Cl 0.03 0.35 28.63 -51.86 -1.48 -1.14 16 21 N -0.42 -6.32 3.18 -118.36 -0.38 -6.70 16 22 C 0.07 0.83 10.36 59.85 0.62 1.45 16 23 H 0.03 0.70 6.66 -51.93 -0.35 0.35 16 24 H 0.10 2.43 6.07 -51.93 -0.32 2.11 16 25 H 0.01 0.28 8.14 -51.93 -0.42 -0.14 16 26 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 27 H 0.06 0.87 7.52 -51.93 -0.39 0.48 16 28 H 0.08 1.30 6.44 -51.93 -0.33 0.97 16 29 H 0.07 0.93 5.10 -51.93 -0.26 0.67 16 30 H 0.21 2.72 4.43 -52.49 -0.23 2.49 16 31 H 0.09 1.01 8.14 -51.93 -0.42 0.59 16 32 H 0.09 0.78 7.63 -51.93 -0.40 0.39 16 33 H 0.11 1.46 6.94 -51.93 -0.36 1.10 16 LS Contribution 288.52 15.07 4.35 4.35 Total: -1.00 -30.41 288.52 -6.56 -36.97 By element: Atomic # 1 Polarization: 3.82 SS G_CDS: -3.38 Total: 0.44 kcal Atomic # 6 Polarization: 7.77 SS G_CDS: -0.73 Total: 7.04 kcal Atomic # 7 Polarization: -49.97 SS G_CDS: -0.36 Total: -50.34 kcal Atomic # 8 Polarization: -12.91 SS G_CDS: 0.08 Total: -12.84 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.02 Total: 15.52 kcal Atomic # 17 Polarization: 0.35 SS G_CDS: -1.48 Total: -1.14 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -30.41 -6.56 -36.97 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000696476225.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.087 kcal (2) G-P(sol) polarization free energy of solvation -30.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.555 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.968 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds