Wall clock time and date at job start Mon Mar 30 2020 01:29:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34601 * 126.49285 * 2 1 4 4 Cl 1.73599 * 125.43218 * 359.97438 * 3 2 1 5 5 N 1.31018 * 109.12932 * 179.97438 * 3 2 1 6 6 C 1.33303 * 109.70577 * 359.97438 * 5 3 2 7 7 C 1.36671 * 107.82832 * 359.97438 * 6 5 3 8 8 C 1.46665 * 126.83903 * 179.97438 * 7 6 5 9 9 O 1.21692 * 119.99981 * 174.46886 * 8 7 6 10 10 N 1.34775 * 120.00134 * 354.47262 * 8 7 6 11 11 C 1.46496 * 120.00147 * 185.12215 * 10 8 7 12 12 C 1.53004 * 109.47361 * 179.97438 * 11 10 8 13 13 C 1.52992 * 109.47351 * 180.02562 * 12 11 10 14 14 C 1.50703 * 109.47243 * 180.02562 * 13 12 11 15 15 H 1.07999 * 119.99578 * 359.97438 * 14 13 12 16 16 C 1.37877 * 120.00025 * 180.02562 * 14 13 12 17 17 N 1.31519 * 120.00180 * 359.97438 * 16 14 13 18 18 Si 1.86801 * 119.99996 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.46896 * 60.00080 * 18 16 14 20 20 H 1.48504 * 109.46960 * 180.02562 * 18 16 14 21 21 H 1.48501 * 109.47183 * 300.00090 * 18 16 14 22 22 H 1.09001 * 109.46978 * 274.32121 * 1 2 3 23 23 H 1.08999 * 109.46769 * 34.32322 * 1 2 3 24 24 H 1.08996 * 109.46832 * 154.32171 * 1 2 3 25 25 H 1.08000 * 126.08323 * 180.26000 * 6 5 3 26 26 H 0.97005 * 119.99832 * 5.11923 * 10 8 7 27 27 H 1.08999 * 109.47359 * 299.99718 * 11 10 8 28 28 H 1.08999 * 109.47226 * 60.00080 * 11 10 8 29 29 H 1.08999 * 109.46872 * 300.00284 * 12 11 10 30 30 H 1.08999 * 109.46666 * 60.00006 * 12 11 10 31 31 H 1.08999 * 109.47319 * 299.99955 * 13 12 11 32 32 H 1.09003 * 109.46946 * 59.99924 * 13 12 11 33 33 H 0.96990 * 120.00190 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2655 1.0821 0.0000 4 17 1.7269 2.7324 -0.0006 5 7 3.5160 0.6911 0.0006 6 6 3.5705 -0.6408 0.0015 7 6 2.2876 -1.1121 0.0021 8 6 1.8669 -2.5171 0.0027 9 8 0.6875 -2.7991 0.1048 10 7 2.7865 -3.4959 -0.1098 11 6 2.3595 -4.8928 -0.2222 12 6 3.5901 -5.7947 -0.3371 13 6 3.1441 -7.2534 -0.4552 14 6 4.3562 -8.1418 -0.5677 15 1 5.3457 -7.7091 -0.5566 16 6 4.2020 -9.5068 -0.6859 17 7 2.9970 -10.0336 -0.6999 18 14 5.7044 -10.6079 -0.8261 19 1 6.5513 -10.4459 0.3829 20 1 5.2714 -12.0237 -0.9418 21 1 6.4848 -10.2293 -2.0315 22 1 -0.3633 0.0774 1.0248 23 1 -0.3633 0.8487 -0.5795 24 1 -0.3633 -0.9262 -0.4453 25 1 4.4686 -1.2407 0.0061 26 1 3.7311 -3.2755 -0.1164 27 1 1.7868 -5.1700 0.6628 28 1 1.7378 -5.0124 -1.1095 29 1 4.1624 -5.5173 -1.2223 30 1 4.2121 -5.6752 0.5499 31 1 2.5716 -7.5311 0.4298 32 1 2.5222 -7.3725 -1.3424 33 1 2.8885 -10.9938 -0.7835 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000710256295.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:29:04 Heat of formation + Delta-G solvation = 5.051040 kcal Electronic energy + Delta-G solvation = -17600.095691 eV Core-core repulsion = 14494.490716 eV Total energy + Delta-G solvation = -3105.604975 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -42.58391 -39.31592 -37.40092 -35.67857 -34.49166 -33.39841 -31.58801 -29.97132 -27.51211 -26.77162 -23.94979 -22.61611 -21.66070 -20.82905 -19.94163 -18.21422 -16.68698 -16.61119 -16.44398 -15.78227 -15.27672 -14.91747 -14.52974 -14.33100 -13.92021 -13.68523 -13.53279 -13.10659 -12.32095 -12.24765 -12.01164 -11.90676 -11.81046 -10.91234 -10.82920 -10.76079 -10.63439 -10.21856 -10.10477 -9.92525 -9.48423 -9.17897 -9.10012 -8.78232 -8.39867 -6.04750 -4.08091 0.81873 0.89834 2.30112 2.34042 3.13348 3.23756 3.30711 3.35656 3.37741 4.28071 4.36361 4.42167 4.66533 4.83536 4.95822 5.19602 5.31189 5.52629 5.66645 5.68004 5.99489 6.06782 6.28583 6.30511 6.51683 6.72023 6.92725 7.26736 7.48701 7.59087 7.70924 7.93373 8.09268 8.34321 8.98350 9.56418 11.06513 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.053853 B = 0.002798 C = 0.002670 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 519.811393 B =10005.004288 C =10484.478891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.413 5.413 3 C 0.256 3.744 4 Cl 0.040 6.960 5 N -0.468 5.468 6 C 0.046 3.954 7 C -0.062 4.062 8 C 0.589 3.411 9 O -0.544 6.544 10 N -0.707 5.707 11 C 0.119 3.881 12 C -0.122 4.122 13 C 0.024 3.976 14 C -0.524 4.524 15 H 0.056 0.944 16 C 0.057 3.943 17 N -0.894 5.894 18 Si 0.894 3.106 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.277 1.277 22 H 0.087 0.913 23 H 0.088 0.912 24 H 0.114 0.886 25 H 0.191 0.809 26 H 0.402 0.598 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.056 0.944 30 H 0.057 0.943 31 H 0.019 0.981 32 H 0.019 0.981 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.404 23.138 1.321 23.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.096 5.096 3 C -0.031 4.031 4 Cl 0.068 6.932 5 N -0.189 5.189 6 C -0.108 4.108 7 C -0.179 4.179 8 C 0.374 3.626 9 O -0.423 6.423 10 N -0.357 5.357 11 C -0.003 4.003 12 C -0.160 4.160 13 C -0.013 4.013 14 C -0.562 4.562 15 H 0.074 0.926 16 C -0.144 4.144 17 N -0.533 5.533 18 Si 0.721 3.279 19 H -0.202 1.202 20 H -0.213 1.213 21 H -0.202 1.202 22 H 0.106 0.894 23 H 0.107 0.893 24 H 0.132 0.868 25 H 0.208 0.792 26 H 0.237 0.763 27 H 0.087 0.913 28 H 0.086 0.914 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -3.947 23.411 1.359 23.780 hybrid contribution 0.432 -0.828 -0.073 0.937 sum -3.514 22.583 1.286 22.891 Atomic orbital electron populations 1.22446 0.74452 1.06404 1.04797 1.45051 1.08635 1.04429 1.51508 1.23204 0.86683 0.84461 1.08712 1.98429 1.88698 1.08994 1.97103 1.70057 1.16099 1.12702 1.20035 1.22725 0.95750 0.90000 1.02331 1.20960 0.91017 0.88772 1.17180 1.16661 0.85936 0.82717 0.77288 1.90803 1.17011 1.83806 1.50719 1.45876 1.09408 1.07350 1.73105 1.21759 0.99124 0.77260 1.02191 1.21917 0.95058 0.97903 1.01117 1.19022 0.96951 0.87724 0.97625 1.21161 0.92822 0.91599 1.50633 0.92619 1.25026 0.95845 0.98304 0.95244 1.69949 1.21233 1.11953 1.50183 0.86637 0.83029 0.79542 0.78662 1.20205 1.21279 1.20216 0.89445 0.89288 0.86772 0.79173 0.76307 0.91255 0.91399 0.92479 0.92462 0.96228 0.96248 0.92836 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.52 10.53 59.85 0.63 1.15 16 2 N -0.41 -4.65 3.18 -118.36 -0.38 -5.02 16 3 C 0.26 2.89 8.48 -90.34 -0.77 2.13 16 4 Cl 0.04 0.35 28.83 -51.86 -1.50 -1.15 16 5 N -0.47 -5.83 11.21 -11.49 -0.13 -5.96 16 6 C 0.05 0.51 11.37 -17.48 -0.20 0.32 16 7 C -0.06 -0.76 6.91 -82.10 -0.57 -1.33 16 8 C 0.59 8.29 7.77 -12.86 -0.10 8.19 16 9 O -0.54 -9.19 14.87 5.20 0.08 -9.11 16 10 N -0.71 -9.31 5.54 -61.63 -0.34 -9.65 16 11 C 0.12 1.92 5.68 -4.04 -0.02 1.90 16 12 C -0.12 -2.23 5.27 -26.73 -0.14 -2.37 16 13 C 0.02 0.60 4.97 -27.89 -0.14 0.46 16 14 C -0.52 -14.27 9.11 -34.44 -0.31 -14.58 16 15 H 0.06 1.45 7.74 -52.49 -0.41 1.05 16 16 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 17 N -0.89 -26.40 13.29 55.43 0.74 -25.67 16 18 Si 0.89 21.16 29.54 -169.99 -5.02 16.14 16 19 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 20 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 21 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 22 H 0.09 0.65 8.14 -51.93 -0.42 0.23 16 23 H 0.09 0.54 7.92 -51.93 -0.41 0.13 16 24 H 0.11 1.15 6.39 -51.93 -0.33 0.82 16 25 H 0.19 1.48 7.46 -52.49 -0.39 1.09 16 26 H 0.40 4.14 7.42 -40.82 -0.30 3.84 16 27 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 28 H 0.07 1.15 8.14 -51.93 -0.42 0.73 16 29 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 30 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 31 H 0.02 0.51 8.14 -51.93 -0.42 0.08 16 32 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 33 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 LS Contribution 305.57 15.07 4.60 4.60 Total: -1.00 -32.30 305.57 -7.60 -39.90 By element: Atomic # 1 Polarization: 2.49 SS G_CDS: -3.94 Total: -1.45 kcal Atomic # 6 Polarization: -0.92 SS G_CDS: -1.72 Total: -2.64 kcal Atomic # 7 Polarization: -46.19 SS G_CDS: -0.11 Total: -46.30 kcal Atomic # 8 Polarization: -9.19 SS G_CDS: 0.08 Total: -9.11 kcal Atomic # 14 Polarization: 21.16 SS G_CDS: -5.02 Total: 16.14 kcal Atomic # 17 Polarization: 0.35 SS G_CDS: -1.50 Total: -1.15 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -32.30 -7.60 -39.90 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000710256295.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.952 kcal (2) G-P(sol) polarization free energy of solvation -32.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.901 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.051 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds