Wall clock time and date at job start Mon Mar 30 2020 01:01:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 N 1.30437 * 125.98682 * 2 1 4 4 N 1.39931 * 108.91596 * 179.77770 * 3 2 1 5 5 C 1.46503 * 125.75769 * 180.27507 * 4 3 2 6 6 C 1.53009 * 109.46829 * 270.17991 * 5 4 3 7 7 Cl 1.80298 * 109.46679 * 179.97438 * 6 5 4 8 8 C 1.34286 * 108.49690 * 0.42502 * 4 3 2 9 9 C 1.50703 * 126.30074 * 179.84755 * 8 4 3 10 10 C 1.38107 * 107.40329 * 359.58318 * 8 4 3 11 11 C 1.47358 * 126.42438 * 180.30100 * 10 8 4 12 12 O 1.21624 * 120.00017 * 90.00292 * 11 10 8 13 13 N 1.34782 * 119.99785 * 270.00007 * 11 10 8 14 14 C 1.36973 * 119.99847 * 180.02562 * 13 11 10 15 15 H 1.07997 * 120.00393 * 359.97438 * 14 13 11 16 16 C 1.38974 * 119.99899 * 180.02562 * 14 13 11 17 17 N 1.31415 * 120.00074 * 359.97438 * 16 14 13 18 18 Si 1.86803 * 120.00001 * 179.97438 * 16 14 13 19 19 H 1.48496 * 109.47350 * 59.99741 * 18 16 14 20 20 H 1.48506 * 109.46904 * 179.97438 * 18 16 14 21 21 H 1.48503 * 109.47115 * 299.99548 * 18 16 14 22 22 H 1.08996 * 109.47403 * 269.96423 * 1 2 3 23 23 H 1.09001 * 109.46976 * 29.96462 * 1 2 3 24 24 H 1.08997 * 109.47058 * 149.96107 * 1 2 3 25 25 H 1.09001 * 109.46867 * 30.17068 * 5 4 3 26 26 H 1.08998 * 109.47620 * 150.17880 * 5 4 3 27 27 H 1.09001 * 109.46642 * 299.99215 * 6 5 4 28 28 H 1.08998 * 109.47110 * 59.99577 * 6 5 4 29 29 H 1.09002 * 109.47152 * 269.68764 * 9 8 4 30 30 H 1.09001 * 109.46980 * 149.68865 * 9 8 4 31 31 H 1.09004 * 109.47113 * 29.68846 * 9 8 4 32 32 H 0.96999 * 119.99623 * 359.97438 * 13 11 10 33 33 H 0.97005 * 119.99766 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2734 1.0554 0.0000 4 7 3.6111 0.6447 0.0051 5 6 4.7784 1.5298 0.0125 6 6 5.1886 1.8449 -1.4275 7 17 6.6248 2.9349 -1.4184 8 6 3.6445 -0.6978 -0.0011 9 6 4.8809 -1.5594 -0.0019 10 6 2.3374 -1.1435 -0.0007 11 6 1.8920 -2.5482 -0.0001 12 8 1.7084 -3.1275 1.0535 13 7 1.6880 -3.1909 -1.1671 14 6 1.2735 -4.4964 -1.1665 15 1 1.1105 -5.0109 -0.2311 16 6 1.0636 -5.1594 -2.3698 17 7 1.2624 -4.5335 -3.5082 18 14 0.4990 -6.9400 -2.3691 19 1 -0.8064 -7.0451 -1.6692 20 1 0.3491 -7.4123 -3.7691 21 1 1.5051 -7.7781 -1.6686 22 1 -0.3634 -0.0006 1.0276 23 1 -0.3633 0.8903 -0.5133 24 1 -0.3633 -0.8896 -0.5144 25 1 4.5287 2.4561 0.5300 26 1 5.6043 1.0378 0.5261 27 1 5.4383 0.9186 -1.9450 28 1 4.3627 2.3369 -1.9412 29 1 5.1785 -1.7669 -1.0298 30 1 4.6703 -2.4975 0.5117 31 1 5.6881 -1.0371 0.5117 32 1 1.8340 -2.7287 -2.0072 33 1 1.1156 -4.9962 -4.3480 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000740742591.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:01:47 Heat of formation + Delta-G solvation = 14.598617 kcal Electronic energy + Delta-G solvation = -18465.315542 eV Core-core repulsion = 15360.124581 eV Total energy + Delta-G solvation = -3105.190961 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.11030 -37.76520 -36.55646 -34.58385 -33.88335 -32.11751 -31.18223 -30.38262 -27.59853 -26.94365 -24.95651 -23.36436 -21.27190 -19.17874 -18.87277 -17.90486 -16.71957 -15.95793 -15.44186 -14.99762 -14.55267 -14.09230 -13.84900 -13.70855 -13.48662 -13.07813 -12.99657 -12.72356 -12.43327 -12.22024 -12.02747 -11.95006 -11.60213 -11.53869 -11.06700 -10.96771 -10.73203 -10.45096 -10.36741 -10.22998 -9.50459 -8.91197 -8.56578 -7.99502 -7.97315 -6.42903 -3.83345 1.59031 2.02209 2.71691 2.93282 3.18898 3.25566 3.30249 3.84018 4.17796 4.28408 4.29460 4.77808 4.80221 4.87377 5.10815 5.23015 5.26676 5.32673 5.38346 5.62539 5.66719 5.96148 6.03504 6.15746 6.24087 6.33249 6.45297 6.92913 7.13672 7.53858 7.94163 8.06495 8.61333 9.16312 9.55746 10.08318 10.74386 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.023907 B = 0.004501 C = 0.004169 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1170.930575 B = 6220.018140 C = 6715.416913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.111 3.889 3 N -0.307 5.307 4 N -0.373 5.373 5 C 0.129 3.871 6 C -0.050 4.050 7 Cl -0.170 7.170 8 C 0.108 3.892 9 C -0.094 4.094 10 C -0.238 4.238 11 C 0.514 3.486 12 O -0.592 6.592 13 N -0.548 5.548 14 C -0.302 4.302 15 H 0.104 0.896 16 C 0.025 3.975 17 N -0.898 5.898 18 Si 0.930 3.070 19 H -0.273 1.273 20 H -0.284 1.284 21 H -0.273 1.273 22 H 0.078 0.922 23 H 0.071 0.929 24 H 0.083 0.917 25 H 0.105 0.895 26 H 0.102 0.898 27 H 0.101 0.899 28 H 0.104 0.896 29 H 0.084 0.916 30 H 0.093 0.907 31 H 0.069 0.931 32 H 0.393 0.607 33 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.676 11.829 1.805 14.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.056 4.056 3 N -0.128 5.128 4 N -0.156 5.156 5 C 0.007 3.993 6 C -0.114 4.114 7 Cl -0.144 7.144 8 C -0.020 4.020 9 C -0.152 4.152 10 C -0.252 4.252 11 C 0.299 3.701 12 O -0.477 6.477 13 N -0.183 5.183 14 C -0.432 4.432 15 H 0.122 0.878 16 C -0.177 4.177 17 N -0.539 5.539 18 Si 0.757 3.243 19 H -0.198 1.198 20 H -0.210 1.210 21 H -0.199 1.199 22 H 0.097 0.903 23 H 0.090 0.910 24 H 0.102 0.898 25 H 0.123 0.877 26 H 0.120 0.880 27 H 0.120 0.880 28 H 0.122 0.878 29 H 0.102 0.898 30 H 0.112 0.888 31 H 0.087 0.913 32 H 0.227 0.773 33 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 7.782 12.787 2.295 15.144 hybrid contribution -0.056 -1.336 -0.648 1.486 sum 7.726 11.451 1.647 13.911 Atomic orbital electron populations 1.20215 0.86304 1.03486 1.03185 1.22394 0.96826 0.89396 0.96966 1.76995 0.85719 1.22559 1.27544 1.47978 1.05038 1.03696 1.58872 1.21809 0.85668 0.95754 0.96073 1.24816 0.90136 0.97172 0.99306 1.98727 1.47183 1.69407 1.99047 1.21402 0.96687 0.83990 0.99895 1.20514 0.91885 0.99143 1.03678 1.20344 0.91267 0.95786 1.17846 1.16829 0.84550 0.84105 0.84647 1.90608 1.57683 1.67879 1.31552 1.41863 1.57787 1.12042 1.06572 1.19685 1.41800 0.87262 0.94448 0.87847 1.25272 0.97442 1.00329 0.94635 1.69620 1.48781 1.37904 0.97590 0.85933 0.79436 0.81880 0.77070 1.19819 1.20983 1.19861 0.90337 0.90996 0.89788 0.87692 0.87967 0.88039 0.87769 0.89784 0.88848 0.91267 0.77320 0.91771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.17 10.28 36.00 0.37 -0.80 16 2 C 0.11 2.07 7.26 -82.01 -0.60 1.47 16 3 N -0.31 -5.27 12.50 33.90 0.42 -4.85 16 4 N -0.37 -5.56 3.58 -56.57 -0.20 -5.76 16 5 C 0.13 1.32 6.34 -4.04 -0.03 1.29 16 6 C -0.05 -0.46 6.98 37.16 0.26 -0.20 16 7 Cl -0.17 -1.56 29.15 -51.86 -1.51 -3.07 16 8 C 0.11 1.82 7.01 -81.57 -0.57 1.25 16 9 C -0.09 -1.28 9.93 36.01 0.36 -0.93 16 10 C -0.24 -4.86 5.88 -105.06 -0.62 -5.47 16 11 C 0.51 12.58 6.93 -12.55 -0.09 12.49 16 12 O -0.59 -16.61 16.68 5.26 0.09 -16.52 16 13 N -0.55 -13.96 5.28 -11.97 -0.06 -14.02 16 14 C -0.30 -8.29 9.68 -14.98 -0.14 -8.44 16 15 H 0.10 2.96 7.15 -52.49 -0.38 2.58 16 16 C 0.03 0.67 5.50 -17.46 -0.10 0.57 16 17 N -0.90 -24.04 13.05 55.50 0.72 -23.32 16 18 Si 0.93 20.61 29.55 -169.99 -5.02 15.59 16 19 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 20 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 21 H -0.27 -6.01 7.11 56.52 0.40 -5.60 16 22 H 0.08 1.17 8.14 -51.93 -0.42 0.75 16 23 H 0.07 0.97 8.14 -51.93 -0.42 0.55 16 24 H 0.08 1.45 8.01 -51.93 -0.42 1.03 16 25 H 0.10 0.99 8.14 -51.93 -0.42 0.57 16 26 H 0.10 0.85 7.01 -51.93 -0.36 0.49 16 27 H 0.10 0.92 8.14 -51.93 -0.42 0.49 16 28 H 0.10 1.01 8.14 -51.93 -0.42 0.59 16 29 H 0.08 1.05 8.14 -51.93 -0.42 0.63 16 30 H 0.09 1.47 7.96 -51.93 -0.41 1.06 16 31 H 0.07 0.71 7.04 -51.93 -0.37 0.34 16 32 H 0.39 9.82 7.88 -40.82 -0.32 9.50 16 33 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 309.11 15.07 4.66 4.66 Total: -1.00 -31.89 309.11 -5.99 -37.87 By element: Atomic # 1 Polarization: 12.11 SS G_CDS: -3.93 Total: 8.18 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -1.15 Total: 1.23 kcal Atomic # 7 Polarization: -48.83 SS G_CDS: 0.88 Total: -47.95 kcal Atomic # 8 Polarization: -16.61 SS G_CDS: 0.09 Total: -16.52 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -5.02 Total: 15.59 kcal Atomic # 17 Polarization: -1.56 SS G_CDS: -1.51 Total: -3.07 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -31.89 -5.99 -37.87 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000740742591.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.472 kcal (2) G-P(sol) polarization free energy of solvation -31.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.873 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds