Wall clock time and date at job start Mon Mar 30 2020 00:57:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43207 * 179.97438 * 2 1 4 4 C 1.38179 * 126.44860 * 181.95748 * 3 2 1 5 5 N 1.34446 * 108.38265 * 180.02562 * 4 3 2 6 6 H 0.96997 * 125.41105 * 180.02562 * 5 4 3 7 7 C 1.37753 * 109.18521 * 0.02562 * 5 4 3 8 8 C 1.46776 * 125.84526 * 179.97438 * 7 5 4 9 9 O 1.21704 * 119.99819 * 180.02562 * 8 7 5 10 10 N 1.34776 * 120.00334 * 0.02723 * 8 7 5 11 11 C 1.40526 * 120.00366 * 179.97438 * 10 8 7 12 12 C 1.40665 * 126.08146 * 0.02562 * 11 10 8 13 13 N 1.30904 * 108.39147 * 179.97438 * 12 11 10 14 14 N 1.40078 * 108.40781 * 0.02562 * 13 12 11 15 15 C 1.37314 * 126.06543 * 180.02562 * 14 13 12 16 16 H 1.08006 * 119.99408 * 179.97438 * 15 14 13 17 17 C 1.38983 * 120.00532 * 359.97438 * 15 14 13 18 18 N 1.31296 * 119.99575 * 359.97438 * 17 15 14 19 19 Si 1.86793 * 120.00285 * 180.02562 * 17 15 14 20 20 H 1.48500 * 109.47351 * 59.99572 * 19 17 15 21 21 H 1.48500 * 109.47424 * 179.97438 * 19 17 15 22 22 H 1.48495 * 109.47010 * 299.99552 * 19 17 15 23 23 C 1.35690 * 126.08957 * 179.97438 * 11 10 8 24 24 C 1.36416 * 108.30285 * 0.22603 * 7 5 4 25 25 H 1.08001 * 125.81302 * 0.03665 * 4 3 2 26 26 H 0.97007 * 119.99883 * 359.97438 * 10 8 7 27 27 H 1.08005 * 125.80678 * 359.69484 * 12 11 10 28 28 H 0.97006 * 119.99939 * 180.02562 * 18 17 15 29 29 H 1.08008 * 126.24581 * 359.97438 * 23 11 10 30 30 H 1.08000 * 126.48263 * 179.77273 * 24 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.3884 1.1119 0.0380 5 7 4.6668 0.6958 0.0232 6 1 5.4460 1.2730 0.0431 7 6 4.6943 -0.6807 -0.0248 8 6 5.9010 -1.5157 -0.0548 9 8 5.8013 -2.7279 -0.0974 10 7 7.1196 -0.9401 -0.0350 11 6 8.2749 -1.7396 -0.0631 12 6 8.3088 -3.1450 -0.1126 13 7 9.5606 -3.5277 -0.1266 14 7 10.3724 -2.3869 -0.0862 15 6 11.7454 -2.3713 -0.0865 16 1 12.2747 -1.4304 -0.0535 17 6 12.4540 -3.5662 -0.1293 18 7 11.8104 -4.7099 -0.1689 19 14 14.3218 -3.5450 -0.1290 20 1 14.8092 -2.8830 1.1076 21 1 14.8327 -4.9385 -0.1783 22 1 14.8085 -2.7967 -1.3158 23 6 9.5562 -1.2934 -0.0483 24 6 3.4080 -1.1344 -0.0455 25 1 3.0589 2.1397 0.0737 26 1 7.1991 0.0261 -0.0013 27 1 7.4484 -3.7976 -0.1309 28 1 12.3050 -5.5439 -0.1984 29 1 9.8726 -0.2613 -0.0133 30 1 3.0916 -2.1662 -0.0862 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000748530620.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:57:24 Heat of formation + Delta-G solvation = 126.463579 kcal Electronic energy + Delta-G solvation = -18661.926778 eV Core-core repulsion = 15460.479151 eV Total energy + Delta-G solvation = -3201.447626 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.71965 -39.85055 -38.36202 -36.49329 -34.43243 -33.28683 -31.68536 -30.44768 -29.84030 -27.75747 -25.08148 -23.08121 -22.98545 -21.02474 -20.44212 -19.62103 -18.92971 -17.45576 -16.66267 -15.89542 -15.47907 -15.34975 -15.30024 -14.26333 -14.21632 -13.92711 -13.61194 -13.45814 -13.33218 -13.02263 -13.01061 -12.80888 -12.08124 -11.73275 -11.53802 -11.29771 -11.04742 -10.60618 -10.31882 -9.54241 -9.34750 -9.25005 -8.89182 -8.61400 -8.13911 -6.81141 -6.61939 -4.29992 1.25207 1.64239 2.55224 2.73170 2.90837 3.00521 3.05292 3.23562 3.36048 3.50705 3.70702 3.80369 4.06958 4.35947 4.60502 4.64823 4.90310 4.95954 5.05866 5.45023 5.72288 6.11576 6.19367 6.30303 6.44655 6.77835 6.86007 6.90466 7.00224 7.14865 7.50899 7.77937 8.01051 8.17208 8.50418 8.69144 9.29460 9.58601 10.33772 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.071819 B = 0.003163 C = 0.003033 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 389.773783 B = 8850.758267 C = 9230.689825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.442 5.442 2 C 0.294 3.706 3 C -0.136 4.136 4 C 0.087 3.913 5 N -0.524 5.524 6 H 0.426 0.574 7 C -0.028 4.028 8 C 0.568 3.432 9 O -0.517 6.517 10 N -0.619 5.619 11 C -0.064 4.064 12 C -0.029 4.029 13 N -0.260 5.260 14 N -0.140 5.140 15 C -0.323 4.323 16 H 0.116 0.884 17 C 0.046 3.954 18 N -0.768 5.768 19 Si 0.935 3.065 20 H -0.267 1.267 21 H -0.276 1.276 22 H -0.267 1.267 23 C -0.084 4.084 24 C -0.065 4.065 25 H 0.186 0.814 26 H 0.390 0.610 27 H 0.178 0.822 28 H 0.277 0.723 29 H 0.145 0.855 30 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.494 12.910 0.449 14.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.119 5.119 2 C -0.020 4.020 3 C -0.147 4.147 4 C -0.057 4.057 5 N -0.119 5.119 6 H 0.264 0.736 7 C -0.140 4.140 8 C 0.354 3.646 9 O -0.393 6.393 10 N -0.261 5.261 11 C -0.170 4.170 12 C -0.204 4.204 13 N -0.091 5.091 14 N 0.093 4.907 15 C -0.456 4.456 16 H 0.134 0.866 17 C -0.171 4.171 18 N -0.394 5.394 19 Si 0.759 3.241 20 H -0.191 1.191 21 H -0.201 1.201 22 H -0.191 1.191 23 C -0.235 4.235 24 C -0.092 4.092 25 H 0.203 0.797 26 H 0.222 0.778 27 H 0.194 0.806 28 H 0.087 0.913 29 H 0.163 0.837 30 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -8.270 10.779 0.375 13.591 hybrid contribution 1.100 1.693 0.059 2.019 sum -7.170 12.471 0.434 14.392 Atomic orbital electron populations 1.81260 1.11881 1.07496 1.11232 1.24670 0.91459 0.93456 0.92464 1.15393 0.84943 0.94242 1.20135 1.22194 0.82388 0.98954 1.02159 1.41830 1.08174 1.07051 1.54840 0.73579 1.20317 0.95835 0.81605 1.16269 1.16824 0.81174 0.87209 0.79394 1.90773 1.85370 1.12814 1.50364 1.42323 1.04157 1.08362 1.71215 1.17188 0.84171 0.91039 1.24554 1.24146 0.96399 0.92363 1.07517 1.78291 0.98855 1.06231 1.25715 1.44566 1.05095 1.02356 1.38653 1.19839 0.76780 0.95489 1.53450 0.86601 1.25653 1.01433 0.94623 0.95434 1.70202 1.36648 0.97801 1.34719 0.85882 0.80403 0.78320 0.79486 1.19135 1.20080 1.19132 1.21227 0.89139 0.93037 1.20136 1.21036 0.89242 0.98869 1.00035 0.79711 0.77754 0.80571 0.91281 0.83713 0.82196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -5.91 18.54 41.84 0.78 -5.13 16 2 C 0.29 3.26 15.83 -22.47 -0.36 2.91 16 3 C -0.14 -1.27 5.97 -106.83 -0.64 -1.90 16 4 C 0.09 0.52 11.90 -16.43 -0.20 0.33 16 5 N -0.52 -3.48 5.92 -9.27 -0.05 -3.53 16 6 H 0.43 1.46 8.13 -40.82 -0.33 1.13 16 7 C -0.03 -0.32 6.99 -82.41 -0.58 -0.90 16 8 C 0.57 9.05 7.76 -12.81 -0.10 8.95 16 9 O -0.52 -10.45 14.00 5.19 0.07 -10.38 16 10 N -0.62 -9.69 5.46 -11.15 -0.06 -9.75 16 11 C -0.06 -1.38 6.90 -83.86 -0.58 -1.96 16 12 C -0.03 -0.73 10.85 -17.03 -0.18 -0.91 16 13 N -0.26 -7.33 10.40 30.80 0.32 -7.01 16 14 N -0.14 -3.68 3.74 -11.41 -0.04 -3.73 16 15 C -0.32 -8.24 10.25 -14.82 -0.15 -8.39 16 16 H 0.12 2.61 7.83 -52.48 -0.41 2.20 16 17 C 0.05 1.16 5.50 -17.50 -0.10 1.06 16 18 N -0.77 -20.92 11.81 55.49 0.66 -20.27 16 19 Si 0.94 18.31 29.55 -169.99 -5.02 13.29 16 20 H -0.27 -5.06 7.11 56.52 0.40 -4.66 16 21 H -0.28 -5.38 7.11 56.52 0.40 -4.97 16 22 H -0.27 -5.06 7.11 56.52 0.40 -4.66 16 23 C -0.08 -1.86 11.49 -16.39 -0.19 -2.05 16 24 C -0.06 -0.73 10.54 -39.08 -0.41 -1.14 16 25 H 0.19 0.38 8.06 -52.49 -0.42 -0.04 16 26 H 0.39 4.22 7.90 -40.82 -0.32 3.90 16 27 H 0.18 4.41 5.91 -52.48 -0.31 4.10 16 28 H 0.28 6.91 8.31 -40.82 -0.34 6.57 16 29 H 0.15 2.59 8.06 -52.48 -0.42 2.17 16 30 H 0.16 1.82 8.06 -52.49 -0.42 1.40 16 LS Contribution 286.96 15.07 4.32 4.32 Total: -1.00 -34.78 286.96 -4.29 -39.07 By element: Atomic # 1 Polarization: 8.90 SS G_CDS: -1.78 Total: 7.12 kcal Atomic # 6 Polarization: -0.53 SS G_CDS: -3.48 Total: -4.00 kcal Atomic # 7 Polarization: -51.02 SS G_CDS: 1.59 Total: -49.42 kcal Atomic # 8 Polarization: -10.45 SS G_CDS: 0.07 Total: -10.38 kcal Atomic # 14 Polarization: 18.31 SS G_CDS: -5.02 Total: 13.29 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -34.78 -4.29 -39.07 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000748530620.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 165.532 kcal (2) G-P(sol) polarization free energy of solvation -34.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 130.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.068 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds