Wall clock time and date at job start Mon Mar 30 2020 01:04:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52990 * 1 3 3 C 1.50704 * 109.47196 * 2 1 4 4 N 1.30417 * 125.97475 * 270.21570 * 3 2 1 5 5 N 1.39922 * 108.95537 * 180.25815 * 4 3 2 6 6 C 1.46505 * 125.74411 * 179.71371 * 5 4 3 7 7 C 1.34346 * 108.50602 * 359.71632 * 5 4 3 8 8 Cl 1.73600 * 126.31964 * 179.97438 * 7 5 4 9 9 C 1.38277 * 107.35887 * 359.97438 * 7 5 4 10 10 C 1.47299 * 126.43480 * 180.02562 * 9 7 5 11 11 O 1.21613 * 120.00190 * 90.02347 * 10 9 7 12 12 N 1.34777 * 119.99559 * 270.02032 * 10 9 7 13 13 C 1.46499 * 119.99665 * 179.72407 * 12 10 9 14 14 C 1.50703 * 109.47138 * 180.28062 * 13 12 10 15 15 H 1.08001 * 120.00037 * 359.97438 * 14 13 12 16 16 C 1.37879 * 119.99824 * 180.02562 * 14 13 12 17 17 N 1.31512 * 120.00502 * 0.02562 * 16 14 13 18 18 Si 1.86805 * 119.99575 * 179.97438 * 16 14 13 19 19 H 1.48501 * 109.47245 * 60.00392 * 18 16 14 20 20 H 1.48504 * 109.46709 * 180.02562 * 18 16 14 21 21 H 1.48500 * 109.47176 * 299.99915 * 18 16 14 22 22 H 1.09001 * 109.47429 * 60.00342 * 1 2 3 23 23 H 1.09005 * 109.47443 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47699 * 299.99966 * 1 2 3 25 25 H 1.09006 * 109.47129 * 240.00118 * 2 1 3 26 26 H 1.09001 * 109.47429 * 119.99658 * 2 1 3 27 27 H 1.09000 * 109.46861 * 269.99774 * 6 5 4 28 28 H 1.08997 * 109.47254 * 30.00107 * 6 5 4 29 29 H 1.09000 * 109.46913 * 150.00205 * 6 5 4 30 30 H 0.97001 * 120.00485 * 0.02562 * 12 10 9 31 31 H 1.09009 * 109.47454 * 300.27637 * 13 12 10 32 32 H 1.08998 * 109.47492 * 60.27932 * 13 12 10 33 33 H 0.96997 * 120.00009 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0323 1.4208 0.0000 4 7 2.2839 2.1445 -1.0554 5 7 2.7370 3.4034 -0.6459 6 6 3.1300 4.5015 -1.5325 7 6 2.7509 3.4354 0.6971 8 17 3.2349 4.7757 1.6886 9 6 2.3085 2.2038 1.1438 10 6 2.1595 1.7844 2.5479 11 8 1.1069 1.9673 3.1288 12 7 3.1899 1.1979 3.1889 13 6 3.0437 0.7862 4.5872 14 6 4.3319 0.1679 5.0661 15 1 5.1750 0.0890 4.3958 16 6 4.4337 -0.2981 6.3598 17 7 3.4066 -0.2035 7.1757 18 14 6.0303 -1.0653 6.9531 19 1 7.1282 -0.0715 6.8424 20 1 5.8817 -1.4836 8.3703 21 1 6.3499 -2.2512 6.1184 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 1.8933 -0.5138 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 4.1946 4.4263 -1.7539 28 1 2.5607 4.4412 -2.4600 29 1 2.9272 5.4540 -1.0429 30 1 4.0296 1.0523 2.7257 31 1 2.8090 1.6569 5.1997 32 1 2.2381 0.0566 4.6689 33 1 3.4785 -0.5310 8.0858 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000787623252.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:04:07 Heat of formation + Delta-G solvation = 20.642170 kcal Electronic energy + Delta-G solvation = -18404.530914 eV Core-core repulsion = 15299.602021 eV Total energy + Delta-G solvation = -3104.928893 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.42323 -38.33906 -36.99923 -34.76587 -34.10252 -32.30110 -31.85571 -30.17939 -27.58651 -26.59688 -23.90173 -22.94125 -21.60035 -20.21068 -19.41654 -17.81474 -16.51222 -16.02614 -15.53512 -15.16446 -15.08232 -14.42559 -14.17476 -13.79277 -13.42383 -13.19744 -13.09815 -12.73809 -12.54400 -11.94590 -11.76998 -11.72645 -11.65293 -11.47485 -11.12836 -10.99237 -10.85464 -10.56016 -10.31134 -9.39355 -9.30017 -9.18989 -8.70004 -8.54429 -7.84934 -6.13489 -4.20056 1.30430 1.44802 2.39917 2.45214 3.26087 3.27760 3.32480 3.33976 4.06867 4.32032 4.51094 4.70533 4.87143 5.00188 5.12771 5.22584 5.39111 5.41951 5.49263 5.53069 5.75534 5.98532 6.10852 6.31180 6.40080 6.51880 7.33994 7.43904 7.45757 7.55341 7.70110 8.00030 8.65821 8.80905 9.11999 9.46275 10.96667 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020265 B = 0.005213 C = 0.004654 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1381.339494 B = 5369.755851 C = 6014.349203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.047 4.047 3 C 0.122 3.878 4 N -0.277 5.277 5 N -0.360 5.360 6 C 0.095 3.905 7 C 0.150 3.850 8 Cl 0.011 6.989 9 C -0.240 4.240 10 C 0.578 3.422 11 O -0.543 6.543 12 N -0.699 5.699 13 C 0.250 3.750 14 C -0.542 4.542 15 H 0.062 0.938 16 C 0.065 3.935 17 N -0.886 5.886 18 Si 0.903 3.097 19 H -0.276 1.276 20 H -0.285 1.285 21 H -0.275 1.275 22 H 0.054 0.946 23 H 0.065 0.935 24 H 0.066 0.934 25 H 0.083 0.917 26 H 0.091 0.909 27 H 0.081 0.919 28 H 0.096 0.904 29 H 0.089 0.911 30 H 0.391 0.609 31 H 0.028 0.972 32 H 0.029 0.971 33 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.052 6.934 -17.186 18.532 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.086 4.086 3 C -0.044 4.044 4 N -0.100 5.100 5 N -0.142 5.142 6 C -0.045 4.045 7 C -0.006 4.006 8 Cl 0.039 6.961 9 C -0.256 4.256 10 C 0.360 3.640 11 O -0.421 6.421 12 N -0.347 5.347 13 C 0.129 3.871 14 C -0.580 4.580 15 H 0.081 0.919 16 C -0.139 4.139 17 N -0.523 5.523 18 Si 0.730 3.270 19 H -0.201 1.201 20 H -0.211 1.211 21 H -0.201 1.201 22 H 0.073 0.927 23 H 0.084 0.916 24 H 0.085 0.915 25 H 0.102 0.898 26 H 0.109 0.891 27 H 0.100 0.900 28 H 0.115 0.885 29 H 0.108 0.892 30 H 0.224 0.776 31 H 0.046 0.954 32 H 0.047 0.953 33 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -0.657 7.302 -17.801 19.252 hybrid contribution 1.418 -0.069 1.074 1.781 sum 0.762 7.233 -16.727 18.239 Atomic orbital electron populations 1.21711 0.93645 1.02316 1.02731 1.20085 0.96809 0.87625 1.04102 1.22312 0.96699 0.96994 0.88407 1.77195 1.21649 0.89505 1.21661 1.48292 1.51007 1.12326 1.02616 1.21997 1.01912 0.86163 0.94465 1.21933 1.02876 0.91816 0.83960 1.98434 1.89573 1.42515 1.65578 1.20175 1.15696 0.93457 0.96300 1.17112 0.84590 0.78663 0.83600 1.90756 1.27868 1.56146 1.67359 1.46461 1.13962 1.58538 1.15710 1.19149 0.97501 0.95596 0.74806 1.21183 0.98150 1.41127 0.97589 0.91947 1.24927 0.96906 0.95648 0.96397 1.69961 1.30027 1.45671 1.06636 0.86496 0.83117 0.79606 0.77811 1.20116 1.21092 1.20062 0.92682 0.91647 0.91523 0.89833 0.89063 0.90004 0.88520 0.89222 0.77618 0.95375 0.95276 0.92417 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.85 9.89 37.15 0.37 -1.49 16 2 C -0.05 -0.63 6.33 -27.89 -0.18 -0.81 16 3 C 0.12 1.92 6.52 -82.01 -0.53 1.39 16 4 N -0.28 -4.11 12.49 33.90 0.42 -3.69 16 5 N -0.36 -4.79 3.98 -64.32 -0.26 -5.04 16 6 C 0.10 0.77 11.28 59.85 0.68 1.44 16 7 C 0.15 2.32 7.54 -16.44 -0.12 2.20 16 8 Cl 0.01 0.15 28.56 -51.86 -1.48 -1.33 16 9 C -0.24 -4.26 5.88 -105.02 -0.62 -4.88 16 10 C 0.58 12.34 7.20 -12.58 -0.09 12.24 16 11 O -0.54 -13.63 17.11 5.27 0.09 -13.54 16 12 N -0.70 -15.25 5.54 -62.60 -0.35 -15.60 16 13 C 0.25 6.62 5.43 -5.19 -0.03 6.59 16 14 C -0.54 -14.67 9.28 -34.44 -0.32 -14.99 16 15 H 0.06 1.58 7.60 -52.49 -0.40 1.19 16 16 C 0.06 1.79 5.46 -17.82 -0.10 1.70 16 17 N -0.89 -25.96 13.29 55.43 0.74 -25.23 16 18 Si 0.90 20.82 29.54 -169.99 -5.02 15.80 16 19 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 20 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 21 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 22 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 23 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 24 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 25 H 0.08 0.94 8.14 -51.93 -0.42 0.51 16 26 H 0.09 1.30 8.01 -51.93 -0.42 0.88 16 27 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 28 H 0.10 0.63 8.14 -51.93 -0.42 0.21 16 29 H 0.09 0.59 7.77 -51.93 -0.40 0.19 16 30 H 0.39 7.61 8.30 -40.82 -0.34 7.27 16 31 H 0.03 0.82 8.14 -51.92 -0.42 0.40 16 32 H 0.03 0.84 8.14 -51.93 -0.42 0.42 16 33 H 0.27 7.34 8.31 -40.82 -0.34 7.00 16 LS Contribution 311.76 15.07 4.70 4.70 Total: -1.00 -32.88 311.76 -6.18 -39.06 By element: Atomic # 1 Polarization: 5.54 SS G_CDS: -4.07 Total: 1.47 kcal Atomic # 6 Polarization: 4.35 SS G_CDS: -0.95 Total: 3.40 kcal Atomic # 7 Polarization: -50.12 SS G_CDS: 0.56 Total: -49.56 kcal Atomic # 8 Polarization: -13.63 SS G_CDS: 0.09 Total: -13.54 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -5.02 Total: 15.80 kcal Atomic # 17 Polarization: 0.15 SS G_CDS: -1.48 Total: -1.33 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -32.88 -6.18 -39.06 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000787623252.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.702 kcal (2) G-P(sol) polarization free energy of solvation -32.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.819 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.060 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds