Wall clock time and date at job start Mon Mar 30 2020 01:29:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.36879 * 126.40132 * 2 1 4 4 Cl 1.73602 * 126.59620 * 0.22078 * 3 2 1 5 5 C 1.34794 * 106.80268 * 179.97438 * 3 2 1 6 6 N 1.34162 * 108.01564 * 359.97438 * 5 3 2 7 7 C 1.30471 * 109.27129 * 0.02562 * 6 5 3 8 8 C 1.50704 * 125.64681 * 179.97438 * 7 6 5 9 9 N 1.46504 * 109.46714 * 90.02102 * 8 7 6 10 10 C 1.34775 * 119.99559 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00061 * 359.97438 * 10 9 8 12 12 C 1.50694 * 120.00019 * 179.97438 * 10 9 8 13 13 C 1.53004 * 109.47468 * 179.97438 * 12 10 9 14 14 C 1.50694 * 109.47468 * 179.97438 * 13 12 10 15 15 H 1.07999 * 120.00138 * 359.97438 * 14 13 12 16 16 C 1.37874 * 120.00210 * 179.97438 * 14 13 12 17 17 N 1.31511 * 119.99873 * 359.97438 * 16 14 13 18 18 Si 1.86806 * 120.00180 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.47111 * 359.97438 * 18 16 14 20 20 H 1.48498 * 109.47184 * 119.99883 * 18 16 14 21 21 H 1.48503 * 109.46933 * 239.99849 * 18 16 14 22 22 H 1.08997 * 109.47331 * 90.02356 * 1 2 3 23 23 H 1.08997 * 109.47281 * 210.02850 * 1 2 3 24 24 H 1.09001 * 109.47031 * 330.02820 * 1 2 3 25 25 H 1.07999 * 125.99040 * 179.97438 * 5 3 2 26 26 H 1.08993 * 109.46868 * 210.01986 * 8 7 6 27 27 H 1.08995 * 109.46781 * 330.02415 * 8 7 6 28 28 H 0.96991 * 120.00441 * 359.97438 * 9 8 7 29 29 H 1.09001 * 109.47381 * 300.00093 * 12 10 9 30 30 H 1.08999 * 109.47393 * 60.00057 * 12 10 9 31 31 H 1.09009 * 109.46782 * 300.00136 * 13 12 10 32 32 H 1.09003 * 109.47219 * 59.99693 * 13 12 10 33 33 H 0.97007 * 120.00186 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2773 1.1017 0.0000 4 17 1.7697 2.7618 0.0054 5 6 3.5472 0.6496 0.0006 6 7 3.5101 -0.6915 0.0015 7 6 2.2671 -1.0880 0.0010 8 6 1.8024 -2.5216 0.0011 9 7 1.6507 -2.9855 1.3824 10 6 1.2424 -4.2461 1.6288 11 8 1.0002 -4.9962 0.7071 12 6 1.0868 -4.7236 3.0496 13 6 0.6150 -6.1790 3.0499 14 6 0.4600 -6.6567 4.4707 15 1 0.6768 -5.9892 5.2915 16 6 0.0414 -7.9459 4.7228 17 7 -0.2231 -8.7587 3.7233 18 14 -0.1513 -8.5379 6.4841 19 1 0.2056 -7.4393 7.4173 20 1 -1.5594 -8.9482 6.7171 21 1 0.7472 -9.6969 6.7179 22 1 -0.3634 -0.0004 -1.0276 23 1 -0.3634 -0.8897 0.5143 24 1 -0.3633 0.8902 0.5134 25 1 4.4382 1.2599 0.0003 26 1 0.8443 -2.5929 -0.5135 27 1 2.5375 -3.1417 -0.5118 28 1 1.8447 -2.3858 2.1196 29 1 2.0451 -4.6519 3.5641 30 1 0.3517 -4.1037 3.5629 31 1 -0.3435 -6.2503 2.5356 32 1 1.3497 -6.7993 2.5365 33 1 -0.5172 -9.6659 3.9006 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000812495970.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:29:26 Heat of formation + Delta-G solvation = 9.092922 kcal Electronic energy + Delta-G solvation = -17700.094602 eV Core-core repulsion = 14594.664896 eV Total energy + Delta-G solvation = -3105.429706 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -42.60516 -39.16805 -37.20257 -34.83893 -34.45591 -33.47006 -31.24896 -30.16648 -27.66426 -26.70654 -25.07621 -21.95300 -21.66949 -20.53881 -19.69615 -17.79111 -16.92056 -16.52873 -15.83065 -15.61674 -15.48180 -14.86951 -14.42210 -14.39381 -13.51381 -13.42520 -13.27340 -13.15572 -12.90385 -12.31559 -12.17294 -12.02589 -11.91979 -11.17923 -10.95339 -10.59149 -10.42168 -10.09685 -9.98435 -9.70699 -9.32786 -9.08991 -8.96753 -8.68927 -8.33369 -5.97280 -4.01620 1.17948 1.31600 2.44281 2.53326 3.15912 3.32122 3.39260 3.42410 3.56754 3.97335 4.27107 4.46904 4.51346 4.68667 4.99704 5.03682 5.19633 5.37931 5.40599 5.64618 5.70010 6.06678 6.18642 6.21926 6.46739 6.54554 6.85689 7.54003 7.72676 7.75164 7.84257 8.05521 8.36765 8.66901 9.06925 9.62143 11.13662 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.039735 B = 0.002991 C = 0.002929 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 704.498242 B = 9358.108948 C = 9558.040437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.445 5.445 3 C 0.014 3.986 4 Cl -0.007 7.007 5 C 0.009 3.991 6 N -0.461 5.461 7 C 0.213 3.787 8 C 0.207 3.793 9 N -0.741 5.741 10 C 0.514 3.486 11 O -0.531 6.531 12 C -0.129 4.129 13 C 0.037 3.963 14 C -0.527 4.527 15 H 0.056 0.944 16 C 0.058 3.942 17 N -0.889 5.889 18 Si 0.892 3.108 19 H -0.273 1.273 20 H -0.284 1.284 21 H -0.284 1.284 22 H 0.085 0.915 23 H 0.099 0.901 24 H 0.091 0.909 25 H 0.183 0.817 26 H 0.083 0.917 27 H 0.101 0.899 28 H 0.400 0.600 29 H 0.082 0.918 30 H 0.080 0.920 31 H 0.024 0.976 32 H 0.025 0.975 33 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.556 23.595 -7.837 24.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.130 5.130 3 C -0.127 4.127 4 Cl 0.021 6.979 5 C -0.142 4.142 6 N -0.180 5.180 7 C -0.049 4.049 8 C 0.081 3.919 9 N -0.398 5.398 10 C 0.303 3.697 11 O -0.405 6.405 12 C -0.169 4.169 13 C -0.001 4.001 14 C -0.565 4.565 15 H 0.075 0.925 16 C -0.144 4.144 17 N -0.528 5.528 18 Si 0.720 3.280 19 H -0.197 1.197 20 H -0.210 1.210 21 H -0.210 1.210 22 H 0.104 0.896 23 H 0.118 0.882 24 H 0.109 0.891 25 H 0.200 0.800 26 H 0.101 0.899 27 H 0.119 0.881 28 H 0.234 0.766 29 H 0.100 0.900 30 H 0.098 0.902 31 H 0.042 0.958 32 H 0.043 0.957 33 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 2.768 22.467 -8.569 24.204 hybrid contribution -0.847 0.859 1.235 1.727 sum 1.921 23.326 -7.334 24.527 Atomic orbital electron populations 1.22259 0.75502 1.05733 1.04573 1.45203 1.08214 1.05413 1.54190 1.21838 0.91327 0.82501 1.17076 1.98388 1.91738 1.10271 1.97487 1.22249 0.94557 0.90997 1.06440 1.70476 1.18219 1.10731 1.18577 1.23209 0.85574 0.90269 1.05881 1.19452 1.01974 0.84201 0.86263 1.46257 1.71773 1.14951 1.06782 1.21622 0.74800 0.79792 0.93534 1.90689 1.48822 1.54144 1.46856 1.21880 1.02693 1.02574 0.89712 1.18916 0.97420 0.86908 0.96858 1.21252 1.45606 0.97438 0.92220 0.92546 1.25025 0.95472 0.96894 0.97009 1.70006 1.45664 1.06607 1.30530 0.86537 0.77686 0.78776 0.84967 1.19749 1.21038 1.20995 0.89621 0.88221 0.89070 0.80022 0.89915 0.88057 0.76620 0.89995 0.90213 0.95796 0.95699 0.92990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.39 10.66 59.85 0.64 1.03 16 2 N -0.45 -4.21 3.16 -117.77 -0.37 -4.59 16 3 C 0.01 0.13 7.49 -16.52 -0.12 0.01 16 4 Cl -0.01 -0.05 28.93 -51.86 -1.50 -1.55 16 5 C 0.01 0.09 11.86 -17.75 -0.21 -0.12 16 6 N -0.46 -5.87 11.25 -10.76 -0.12 -6.00 16 7 C 0.21 2.42 7.27 -155.33 -1.13 1.29 16 8 C 0.21 2.51 5.76 -5.19 -0.03 2.48 16 9 N -0.74 -10.00 5.55 -61.47 -0.34 -10.34 16 10 C 0.51 9.40 7.83 -10.99 -0.09 9.31 16 11 O -0.53 -11.90 15.98 5.56 0.09 -11.81 16 12 C -0.13 -2.53 5.64 -27.88 -0.16 -2.69 16 13 C 0.04 0.96 4.26 -27.88 -0.12 0.85 16 14 C -0.53 -14.79 9.11 -34.44 -0.31 -15.11 16 15 H 0.06 1.50 7.74 -52.49 -0.41 1.09 16 16 C 0.06 1.66 5.46 -17.82 -0.10 1.57 16 17 N -0.89 -27.21 13.29 55.43 0.74 -26.47 16 18 Si 0.89 21.53 29.54 -169.99 -5.02 16.51 16 19 H -0.27 -6.37 7.11 56.52 0.40 -5.96 16 20 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 21 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 22 H 0.09 0.44 8.14 -51.93 -0.42 0.02 16 23 H 0.10 0.63 7.66 -51.93 -0.40 0.23 16 24 H 0.09 0.48 7.92 -51.93 -0.41 0.06 16 25 H 0.18 1.44 8.06 -52.49 -0.42 1.02 16 26 H 0.08 0.92 7.71 -51.93 -0.40 0.52 16 27 H 0.10 1.35 8.14 -51.93 -0.42 0.92 16 28 H 0.40 4.62 8.46 -40.82 -0.35 4.27 16 29 H 0.08 1.50 8.14 -51.93 -0.42 1.07 16 30 H 0.08 1.41 8.14 -51.93 -0.42 0.99 16 31 H 0.02 0.68 8.10 -51.92 -0.42 0.26 16 32 H 0.02 0.72 8.10 -51.93 -0.42 0.30 16 33 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 LS Contribution 308.98 15.07 4.66 4.66 Total: -1.00 -34.28 308.98 -7.55 -41.84 By element: Atomic # 1 Polarization: 3.19 SS G_CDS: -4.05 Total: -0.86 kcal Atomic # 6 Polarization: 0.25 SS G_CDS: -1.63 Total: -1.38 kcal Atomic # 7 Polarization: -47.30 SS G_CDS: -0.10 Total: -47.40 kcal Atomic # 8 Polarization: -11.90 SS G_CDS: 0.09 Total: -11.81 kcal Atomic # 14 Polarization: 21.53 SS G_CDS: -5.02 Total: 16.51 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.50 Total: -1.55 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -34.28 -7.55 -41.84 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000812495970.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.931 kcal (2) G-P(sol) polarization free energy of solvation -34.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds